RNA–Protein interactions for RNA: ENST00000369553.5

HIPK1-203, Transcript of homeodomain interacting protein kinase 1, humanhuman

TSL 1 (best) BASIC

Gene HIPK1, Length 2,883 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIPK1-203ENST00000369553 TCP10Q12799 353 aa11.1□□□□□ -0.63
HIPK1-203ENST00000369553 VWA3BQ502W6 1294 aa11.1□□□□□ -0.63
HIPK1-203ENST00000369553 RESP18Q5W5W9 173 aa11.1□□□□□ -0.63
HIPK1-203ENST00000369553 SH3BP5LQ7L8J4 393 aa11.1□□□□□ -0.63
HIPK1-203ENST00000369553 FAM186BQ8IYM0 893 aa11.1□□□□□ -0.63
HIPK1-203ENST00000369553 ALDH16A1Q8IZ83 802 aa11.1□□□□□ -0.63
HIPK1-203ENST00000369553 SAMD14Q8IZD0 417 aaPredicted RBP11.1□□□□□ -0.63
HIPK1-203ENST00000369553 ARHGAP24Q8N264 748 aa11.1□□□□□ -0.63
HIPK1-203ENST00000369553 SCG3Q8WXD2 468 aaKnown RBP11.1□□□□□ -0.63
HIPK1-203ENST00000369553 VTI1AQ96AJ9 217 aa11.1□□□□□ -0.63
HIPK1-203ENST00000369553 SGIP1Q9BQI5 828 aa11.1□□□□□ -0.63
HIPK1-203ENST00000369553 ZNF287Q9HBT7 754 aa11.1□□□□□ -0.63
HIPK1-203ENST00000369553 SMARCAL1Q9NZC9 954 aa11.1□□□□□ -0.63
HIPK1-203ENST00000369553 TMCC3Q9ULS5 477 aa11.1□□□□□ -0.63
HIPK1-203ENST00000369553 PCDHA7Q9UN72 937 aa11.1□□□□□ -0.63
HIPK1-203ENST00000369553 ZSCAN5CA6NGD5 496 aaPredicted RBP11.1□□□□□ -0.63
HIPK1-203ENST00000369553 BTBD18B2RXH4 712 aa11.1□□□□□ -0.63
HIPK1-203ENST00000369553 B4GALT4O60513 344 aa11.1□□□□□ -0.63
HIPK1-203ENST00000369553 VEGFAP15692 232 aaPredicted RBP11.1□□□□□ -0.63
HIPK1-203ENST00000369553 SHMT1P34896 483 aa11.1□□□□□ -0.63
HIPK1-203ENST00000369553 PRCPP42785 496 aa11.1□□□□□ -0.63
HIPK1-203ENST00000369553 VAV2P52735 878 aa11.1□□□□□ -0.63
HIPK1-203ENST00000369553 AP3M2P53677 418 aa11.1□□□□□ -0.63
HIPK1-203ENST00000369553 GRM4Q14833 912 aa11.1□□□□□ -0.63
HIPK1-203ENST00000369553 TBC1D10BQ4KMP7 808 aaPredicted RBP11.1□□□□□ -0.63
HIPK1-203ENST00000369553 PAPD7Q5XG87 772 aaKnown RBP11.1□□□□□ -0.63
HIPK1-203ENST00000369553 MARK2Q7KZI7 788 aaKnown RBP11.1□□□□□ -0.63
HIPK1-203ENST00000369553 PIGWQ7Z7B1 504 aa11.1□□□□□ -0.63
HIPK1-203ENST00000369553 LRRC34Q8IZ02 419 aa11.1□□□□□ -0.63
HIPK1-203ENST00000369553 NPLOC4Q8TAT6 608 aa11.1□□□□□ -0.63
HIPK1-203ENST00000369553 RIN3Q8TB24 985 aa11.1□□□□□ -0.63
HIPK1-203ENST00000369553 OXER1Q8TDS5 423 aa11.1□□□□□ -0.63
HIPK1-203ENST00000369553 PMM1Q92871 262 aa11.1□□□□□ -0.63
HIPK1-203ENST00000369553 CEP95Q96GE4 821 aa11.1□□□□□ -0.63
HIPK1-203ENST00000369553 TDRD3Q9H7E2 651 aaKnown RBP11.1□□□□□ -0.63
HIPK1-203ENST00000369553 METTL5Q9NRN9 209 aaKnown RBP11.1□□□□□ -0.63
HIPK1-203ENST00000369553 VPS54Q9P1Q0 977 aa11.1□□□□□ -0.63
HIPK1-203ENST00000369553 SAMD15Q9P1V8 674 aa11.1□□□□□ -0.63
HIPK1-203ENST00000369553 PPP1R1BQ9UD71 204 aaPredicted RBP11.1□□□□□ -0.63
HIPK1-203ENST00000369553 STX8Q9UNK0 236 aa11.1□□□□□ -0.63
HIPK1-203ENST00000369553 PCDHB2Q9Y5E7 798 aa11.1□□□□□ -0.63
HIPK1-203ENST00000369553 PCDHGA8Q9Y5G5 932 aa11.1□□□□□ -0.63
HIPK1-203ENST00000369553 DDTLA6NHG4 134 aaPredicted RBP11.09□□□□□ -0.63
HIPK1-203ENST00000369553 TEX33O43247 280 aa11.09□□□□□ -0.63
HIPK1-203ENST00000369553 SEC24DO94855 1032 aaPredicted RBP11.09□□□□□ -0.63
HIPK1-203ENST00000369553 PRLRP16471 622 aa11.09□□□□□ -0.63
HIPK1-203ENST00000369553 ETV3P41162 512 aa11.09□□□□□ -0.63
HIPK1-203ENST00000369553 ACADSBP45954 432 aa11.09□□□□□ -0.63
HIPK1-203ENST00000369553 CDK7P50613 346 aa11.09□□□□□ -0.63
HIPK1-203ENST00000369553 SIGIRRQ6IA17 410 aa11.09□□□□□ -0.63
HIPK1-203ENST00000369553 RSBN1LQ6PCB5 846 aaPredicted RBP11.09□□□□□ -0.63
HIPK1-203ENST00000369553 ASRGL1Q7L266 308 aa11.09□□□□□ -0.63
HIPK1-203ENST00000369553 CLEC10AQ8IUN9 316 aa11.09□□□□□ -0.63
HIPK1-203ENST00000369553 LINC00301Q8NCQ3 95 aa11.09□□□□□ -0.63
HIPK1-203ENST00000369553 PRMT6Q96LA8 375 aaPredicted RBP11.09□□□□□ -0.63
HIPK1-203ENST00000369553 GMLQ99445 158 aa11.09□□□□□ -0.63
HIPK1-203ENST00000369553 MAD2L2Q9UI95 211 aa11.09□□□□□ -0.63
HIPK1-203ENST00000369553 NOVA2Q9UNW9 492 aaKnown RBP11.09□□□□□ -0.63
HIPK1-203ENST00000369553 HBS1LQ9Y450 684 aaKnown RBP11.09□□□□□ -0.63
HIPK1-203ENST00000369553 GOLGA8IPA6NC78 632 aa11.09□□□□□ -0.63
HIPK1-203ENST00000369553 S100BP04271 92 aaPredicted RBP11.09□□□□□ -0.63
HIPK1-203ENST00000369553 TCEA1P23193 301 aaKnown RBP11.09□□□□□ -0.63
HIPK1-203ENST00000369553 HOXD13P35453 343 aa11.09□□□□□ -0.63
HIPK1-203ENST00000369553 NOVP48745 357 aa11.09□□□□□ -0.63
HIPK1-203ENST00000369553 EIF2B2P49770 351 aaKnown RBP11.09□□□□□ -0.63
HIPK1-203ENST00000369553 ERVK-24P63145 666 aa11.09□□□□□ -0.63
HIPK1-203ENST00000369553 STK11Q15831 433 aa11.09□□□□□ -0.63
HIPK1-203ENST00000369553 DALRD3Q5D0E6 543 aaKnown RBP11.09□□□□□ -0.63
HIPK1-203ENST00000369553 HAUS3Q68CZ6 603 aa11.09□□□□□ -0.63
HIPK1-203ENST00000369553 Q6ZNX1 250 aa11.09□□□□□ -0.63
HIPK1-203ENST00000369553 ANKMY2Q8IV38 441 aa11.09□□□□□ -0.63
HIPK1-203ENST00000369553 KSR1Q8IVT5 923 aa11.09□□□□□ -0.63
HIPK1-203ENST00000369553 DIS3L2Q8IYB7 885 aaKnown RBP11.09□□□□□ -0.63
HIPK1-203ENST00000369553 MMGT1Q8N4V1 131 aa11.09□□□□□ -0.63
HIPK1-203ENST00000369553 UPF1Q92900 1129 aaKnown RBP eCLIP11.09□□□□□ -0.63
HIPK1-203ENST00000369553 IDI2Q9BXS1 227 aa11.09□□□□□ -0.63
HIPK1-203ENST00000369553 DNAJC18Q9H819 358 aa11.09□□□□□ -0.63
HIPK1-203ENST00000369553 JADE2Q9NQC1 790 aa11.09□□□□□ -0.63
HIPK1-203ENST00000369553 SERPINB13Q9UIV8 391 aa11.09□□□□□ -0.63
HIPK1-203ENST00000369553 EXOC7Q9UPT5 735 aa11.09□□□□□ -0.63
HIPK1-203ENST00000369553 GREB1LQ9C091 1923 aaPredicted RBP11.09□□□□□ -0.63
HIPK1-203ENST00000369553 FAM196BA6NMK8 535 aa11.08□□□□□ -0.64
HIPK1-203ENST00000369553 XPOTO43592 962 aaKnown RBP11.08□□□□□ -0.64
HIPK1-203ENST00000369553 ENTPD5O75356 428 aa11.08□□□□□ -0.64
HIPK1-203ENST00000369553 CCDC159P0C7I6 412 aa11.08□□□□□ -0.64
HIPK1-203ENST00000369553 ANXA13P27216 316 aa11.08□□□□□ -0.64
HIPK1-203ENST00000369553 VHLP40337 213 aa11.08□□□□□ -0.64
HIPK1-203ENST00000369553 VPS41P49754 854 aa11.08□□□□□ -0.64
HIPK1-203ENST00000369553 NR5A1Q13285 461 aa11.08□□□□□ -0.64
HIPK1-203ENST00000369553 GALNTL6Q49A17 601 aa11.08□□□□□ -0.64
HIPK1-203ENST00000369553 ANO1Q5XXA6 986 aa11.08□□□□□ -0.64
HIPK1-203ENST00000369553 TWF2Q6IBS0 349 aaKnown RBP11.08□□□□□ -0.64
HIPK1-203ENST00000369553 SNRNP48Q6IEG0 339 aaKnown RBP11.08□□□□□ -0.64
HIPK1-203ENST00000369553 RETREG2Q8NC44 543 aa11.08□□□□□ -0.64
HIPK1-203ENST00000369553 GSDMBQ8TAX9 411 aa11.08□□□□□ -0.64
HIPK1-203ENST00000369553 ACMSDQ8TDX5 336 aa11.08□□□□□ -0.64
HIPK1-203ENST00000369553 OSCP1Q8WVF1 389 aa11.08□□□□□ -0.64
HIPK1-203ENST00000369553 ZNF317Q96PQ6 595 aaPredicted RBP11.08□□□□□ -0.64
HIPK1-203ENST00000369553 ARMC7Q9H6L4 198 aa11.08□□□□□ -0.64
HIPK1-203ENST00000369553 POLR3EQ9NVU0 708 aa11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms