RNA–Protein interactions for RNA: ENST00000368436.1

CKS1B-202, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 2 BASIC

Gene CKS1B, Length 820 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-202ENST00000368436 KIFAP3Q92845 792 aa17.65■□□□□ 0.42
CKS1B-202ENST00000368436 IFT74Q96LB3 600 aa17.65■□□□□ 0.42
CKS1B-202ENST00000368436 KIF2CQ99661 725 aa17.65■□□□□ 0.42
CKS1B-202ENST00000368436 KIFC3Q9BVG8 833 aa17.65■□□□□ 0.42
CKS1B-202ENST00000368436 POLD4Q9HCU8 107 aa17.65■□□□□ 0.42
CKS1B-202ENST00000368436 SH2B1Q9NRF2 756 aaPredicted RBP17.65■□□□□ 0.42
CKS1B-202ENST00000368436 FBXL21Q9UKT6 434 aa17.65■□□□□ 0.42
CKS1B-202ENST00000368436 NOL7Q9UMY1 257 aaKnown RBP17.65■□□□□ 0.42
CKS1B-202ENST00000368436 KIAA1024Q9UPX6 916 aa17.65■□□□□ 0.42
CKS1B-202ENST00000368436 ANHXE9PGG2 379 aa17.64■□□□□ 0.41
CKS1B-202ENST00000368436 TMEM189-UBE2V1I3L0A0 370 aa17.64■□□□□ 0.41
CKS1B-202ENST00000368436 LIG1P18858 919 aa17.64■□□□□ 0.41
CKS1B-202ENST00000368436 TOB1P50616 345 aaPredicted RBP17.64■□□□□ 0.41
CKS1B-202ENST00000368436 GNL2Q13823 731 aaKnown RBP17.64■□□□□ 0.41
CKS1B-202ENST00000368436 NBR1Q14596 966 aa17.64■□□□□ 0.41
CKS1B-202ENST00000368436 PSMD5Q16401 504 aa17.64■□□□□ 0.41
CKS1B-202ENST00000368436 CEP57Q86XR8 500 aa17.64■□□□□ 0.41
CKS1B-202ENST00000368436 SIX5Q8N196 739 aa17.64■□□□□ 0.41
CKS1B-202ENST00000368436 FAM184AQ8NB25 1140 aa17.64■□□□□ 0.41
CKS1B-202ENST00000368436 RTP3Q9BQQ7 232 aa17.64■□□□□ 0.41
CKS1B-202ENST00000368436 GDAQ9Y2T3 454 aa17.64■□□□□ 0.41
CKS1B-202ENST00000368436 STK24Q9Y6E0 443 aa17.64■□□□□ 0.41
CKS1B-202ENST00000368436 CFHP08603 1231 aa17.63■□□□□ 0.41
CKS1B-202ENST00000368436 HNRNPA1P09651 372 aaKnown RBP eCLIP17.63■□□□□ 0.41
CKS1B-202ENST00000368436 SRFP11831 508 aa17.63■□□□□ 0.41
CKS1B-202ENST00000368436 PTGDRQ13258 359 aa17.63■□□□□ 0.41
CKS1B-202ENST00000368436 ATF7IP2Q5U623 682 aa17.63■□□□□ 0.41
CKS1B-202ENST00000368436 PDXDC1Q6P996 788 aa17.63■□□□□ 0.41
CKS1B-202ENST00000368436 PDZRN4Q6ZMN7 1036 aaPredicted RBP17.63■□□□□ 0.41
CKS1B-202ENST00000368436 CCDC105Q8IYK2 499 aa17.63■□□□□ 0.41
CKS1B-202ENST00000368436 PPP1R10Q96QC0 940 aaKnown RBP17.63■□□□□ 0.41
CKS1B-202ENST00000368436 DDX19AQ9NUU7 478 aaKnown RBP17.63■□□□□ 0.41
CKS1B-202ENST00000368436 TNFSF13BQ9Y275 285 aa17.63■□□□□ 0.41
CKS1B-202ENST00000368436 ZFP37Q9Y6Q3 630 aaPredicted RBP17.63■□□□□ 0.41
CKS1B-202ENST00000368436 ZFHX2Q9C0A1 2572 aaPredicted RBP17.62■□□□□ 0.41
CKS1B-202ENST00000368436 KRBA1A5PL33 1030 aa17.62■□□□□ 0.41
CKS1B-202ENST00000368436 K7ERI5 159 aa17.62■□□□□ 0.41
CKS1B-202ENST00000368436 ADAM12O43184 909 aa17.62■□□□□ 0.41
CKS1B-202ENST00000368436 FGFR3P22607 806 aa17.62■□□□□ 0.41
CKS1B-202ENST00000368436 IGFBP6P24592 240 aaPredicted RBP17.62■□□□□ 0.41
CKS1B-202ENST00000368436 HOXA9P31269 272 aa17.62■□□□□ 0.41
CKS1B-202ENST00000368436 HTR4Q13639 388 aa17.62■□□□□ 0.41
CKS1B-202ENST00000368436 RAB33AQ14088 237 aa17.62■□□□□ 0.41
CKS1B-202ENST00000368436 DCLRE1AQ6PJP8 1040 aa17.62■□□□□ 0.41
CKS1B-202ENST00000368436 CD300LGQ6UXG3 332 aa17.62■□□□□ 0.41
CKS1B-202ENST00000368436 GET4Q7L5D6 327 aaPredicted RBP17.62■□□□□ 0.41
CKS1B-202ENST00000368436 APBB1IPQ7Z5R6 666 aaPredicted RBP17.62■□□□□ 0.41
CKS1B-202ENST00000368436 SNX29Q8TEQ0 813 aa17.62■□□□□ 0.41
CKS1B-202ENST00000368436 RAB34Q9BZG1 259 aa17.62■□□□□ 0.41
CKS1B-202ENST00000368436 PCDHB6Q9Y5E3 794 aa17.62■□□□□ 0.41
CKS1B-202ENST00000368436 MYH15Q9Y2K3 1946 aa17.62■□□□□ 0.41
CKS1B-202ENST00000368436 NOTCH4Q99466 2003 aa17.62■□□□□ 0.41
CKS1B-202ENST00000368436 CITO14578 2027 aa17.61■□□□□ 0.41
CKS1B-202ENST00000368436 LAD1O00515 517 aa17.61■□□□□ 0.41
CKS1B-202ENST00000368436 C8AP07357 584 aa17.61■□□□□ 0.41
CKS1B-202ENST00000368436 FSHRP23945 695 aa17.61■□□□□ 0.41
CKS1B-202ENST00000368436 NPTX2P47972 431 aa17.61■□□□□ 0.41
CKS1B-202ENST00000368436 UPP1Q16831 310 aa17.61■□□□□ 0.41
CKS1B-202ENST00000368436 XKR4Q5GH76 650 aa17.61■□□□□ 0.41
CKS1B-202ENST00000368436 LIN9Q5TKA1 542 aa17.61■□□□□ 0.41
CKS1B-202ENST00000368436 ALKAL1Q6UXT8 129 aa17.61■□□□□ 0.41
CKS1B-202ENST00000368436 ASCL5Q7RTU5 278 aa17.61■□□□□ 0.41
CKS1B-202ENST00000368436 GRASPQ7Z6J2 395 aaPredicted RBP17.61■□□□□ 0.41
CKS1B-202ENST00000368436 DAW1Q8N136 415 aa17.61■□□□□ 0.41
CKS1B-202ENST00000368436 DTWD2Q8NBA8 298 aa17.61■□□□□ 0.41
CKS1B-202ENST00000368436 UROC1Q96N76 676 aa17.61■□□□□ 0.41
CKS1B-202ENST00000368436 ACO2Q99798 780 aaKnown RBP17.61■□□□□ 0.41
CKS1B-202ENST00000368436 TMEM134Q9H6X4 195 aa17.61■□□□□ 0.41
CKS1B-202ENST00000368436 PTPRHQ9HD43 1115 aa17.61■□□□□ 0.41
CKS1B-202ENST00000368436 SLC2A4RGQ9NR83 387 aa17.61■□□□□ 0.41
CKS1B-202ENST00000368436 MYO15AQ9UKN7 3530 aa17.6■□□□□ 0.41
CKS1B-202ENST00000368436 PRR23AA6NEV1 266 aa17.6■□□□□ 0.41
CKS1B-202ENST00000368436 E9PMD0 336 aa17.6■□□□□ 0.41
CKS1B-202ENST00000368436 B3GAT3O94766 335 aa17.6■□□□□ 0.41
CKS1B-202ENST00000368436 POU2F2P09086 479 aa17.6■□□□□ 0.41
CKS1B-202ENST00000368436 OR1D2P34982 312 aa17.6■□□□□ 0.41
CKS1B-202ENST00000368436 GRM5P41594 1212 aa17.6■□□□□ 0.41
CKS1B-202ENST00000368436 CLCNKBP51801 687 aa17.6■□□□□ 0.41
CKS1B-202ENST00000368436 PEX3P56589 373 aa17.6■□□□□ 0.41
CKS1B-202ENST00000368436 IL17AQ16552 155 aa17.6■□□□□ 0.41
CKS1B-202ENST00000368436 UVSSAQ2YD98 709 aa17.6■□□□□ 0.41
CKS1B-202ENST00000368436 GLRA4Q5JXX5 417 aa17.6■□□□□ 0.41
CKS1B-202ENST00000368436 PPM1LQ5SGD2 360 aa17.6■□□□□ 0.41
CKS1B-202ENST00000368436 CDT1Q9H211 546 aa17.6■□□□□ 0.41
CKS1B-202ENST00000368436 ARHGAP28Q9P2N2 729 aa17.6■□□□□ 0.41
CKS1B-202ENST00000368436 MTRRQ9UBK8 725 aa17.6■□□□□ 0.41
CKS1B-202ENST00000368436 CDH7Q9ULB5 785 aa17.6■□□□□ 0.41
CKS1B-202ENST00000368436 DNM3Q9UQ16 869 aa17.6■□□□□ 0.41
CKS1B-202ENST00000368436 BACE2Q9Y5Z0 518 aa17.6■□□□□ 0.41
CKS1B-202ENST00000368436 NUMBLQ9Y6R0 609 aa17.6■□□□□ 0.41
CKS1B-202ENST00000368436 PHLPP2Q6ZVD8 1323 aa17.6■□□□□ 0.41
CKS1B-202ENST00000368436 MYH11P35749 1972 aa17.6■□□□□ 0.41
CKS1B-202ENST00000368436 PDCD11Q14690 1871 aaKnown RBP17.59■□□□□ 0.41
CKS1B-202ENST00000368436 SMIM28A0A1B0GU29 152 aa17.59■□□□□ 0.41
CKS1B-202ENST00000368436 CCDC169A6NNP5 214 aa17.59■□□□□ 0.41
CKS1B-202ENST00000368436 PP2D1A8MPX8 630 aa17.59■□□□□ 0.41
CKS1B-202ENST00000368436 PRPHP41219 470 aa17.59■□□□□ 0.41
CKS1B-202ENST00000368436 NTHL1P78549 312 aa17.59■□□□□ 0.41
CKS1B-202ENST00000368436 KRT79Q5XKE5 535 aa17.59■□□□□ 0.41
CKS1B-202ENST00000368436 PHLDB3Q6NSJ2 640 aa17.59■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms