RNA–Protein interactions for RNA: ENST00000368298.2

LMNA-204, Transcript of lamin A/C, humanhuman

TSL 1 (best)

Gene LMNA, Length 1,475 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-204ENST00000368298 SNX27Q96L92 541 aa20.37■□□□□ 0.85
LMNA-204ENST00000368298 GUCD1Q96NT3 240 aa20.37■□□□□ 0.85
LMNA-204ENST00000368298 RPS6KC1Q96S38 1066 aa20.37■□□□□ 0.85
LMNA-204ENST00000368298 CXCL16Q9H2A7 254 aa20.37■□□□□ 0.85
LMNA-204ENST00000368298 PRDM12Q9H4Q4 367 aa20.37■□□□□ 0.85
LMNA-204ENST00000368298 CNTN3Q9P232 1028 aa20.37■□□□□ 0.85
LMNA-204ENST00000368298 MTUS1Q9ULD2 1270 aa20.37■□□□□ 0.85
LMNA-204ENST00000368298 PLAGL2Q9UPG8 496 aa20.37■□□□□ 0.85
LMNA-204ENST00000368298 TRIP11Q15643 1979 aa20.36■□□□□ 0.85
LMNA-204ENST00000368298 TTC26A0AVF1 554 aa20.36■□□□□ 0.85
LMNA-204ENST00000368298 B4GALT3O60512 393 aa20.36■□□□□ 0.85
LMNA-204ENST00000368298 LDHAP00338 332 aaKnown RBP20.36■□□□□ 0.85
LMNA-204ENST00000368298 THP07101 528 aa20.36■□□□□ 0.85
LMNA-204ENST00000368298 HARSP12081 509 aaKnown RBP20.36■□□□□ 0.85
LMNA-204ENST00000368298 KCNE1P15382 129 aa20.36■□□□□ 0.85
LMNA-204ENST00000368298 ALDH7A1P49419 539 aaKnown RBP20.36■□□□□ 0.85
LMNA-204ENST00000368298 BCAR1P56945 870 aa20.36■□□□□ 0.85
LMNA-204ENST00000368298 SEZ6Q53EL9 994 aa20.36■□□□□ 0.85
LMNA-204ENST00000368298 COBLL1Q53SF7 1204 aa20.36■□□□□ 0.85
LMNA-204ENST00000368298 SPOUT1Q5T280 376 aaKnown RBP20.36■□□□□ 0.85
LMNA-204ENST00000368298 CCDC183Q5T5S1 534 aa20.36■□□□□ 0.85
LMNA-204ENST00000368298 SMARCE1Q969G3 411 aa20.36■□□□□ 0.85
LMNA-204ENST00000368298 ZNF558Q96NG5 402 aa20.36■□□□□ 0.85
LMNA-204ENST00000368298 PPP1R10Q96QC0 940 aaKnown RBP20.36■□□□□ 0.85
LMNA-204ENST00000368298 TSPAN18Q96SJ8 248 aa20.36■□□□□ 0.85
LMNA-204ENST00000368298 CDX2Q99626 313 aaPredicted RBP20.36■□□□□ 0.85
LMNA-204ENST00000368298 GRPEL1Q9HAV7 217 aa20.36■□□□□ 0.85
LMNA-204ENST00000368298 CDH23Q9H251 3354 aa20.35■□□□□ 0.85
LMNA-204ENST00000368298 MYO9BQ13459 2157 aa20.35■□□□□ 0.85
LMNA-204ENST00000368298 SMIM28A0A1B0GU29 152 aa20.35■□□□□ 0.85
LMNA-204ENST00000368298 KIF20AO95235 890 aa20.35■□□□□ 0.85
LMNA-204ENST00000368298 GALTP07902 379 aa20.35■□□□□ 0.85
LMNA-204ENST00000368298 PPM1AP35813 382 aa20.35■□□□□ 0.85
LMNA-204ENST00000368298 TNFSF9P41273 254 aa20.35■□□□□ 0.85
LMNA-204ENST00000368298 ZBTB41Q5SVQ8 909 aa20.35■□□□□ 0.85
LMNA-204ENST00000368298 CRELD2Q6UXH1 353 aaPredicted RBP20.35■□□□□ 0.85
LMNA-204ENST00000368298 CD302Q8IX05 232 aa20.35■□□□□ 0.85
LMNA-204ENST00000368298 NELFCDQ8IXH7 590 aa20.35■□□□□ 0.85
LMNA-204ENST00000368298 C12orf56Q8IXR9 622 aa20.35■□□□□ 0.85
LMNA-204ENST00000368298 SLC39A11Q8N1S5 342 aa20.35■□□□□ 0.85
LMNA-204ENST00000368298 GUF1Q8N442 669 aaKnown RBP20.35■□□□□ 0.85
LMNA-204ENST00000368298 KLHL23Q8NBE8 558 aa20.35■□□□□ 0.85
LMNA-204ENST00000368298 FAM193BQ96PV7 902 aaPredicted RBP20.35■□□□□ 0.85
LMNA-204ENST00000368298 KCTD10Q9H3F6 313 aa20.35■□□□□ 0.85
LMNA-204ENST00000368298 AGPAT3Q9NRZ7 376 aa20.35■□□□□ 0.85
LMNA-204ENST00000368298 LMCD1Q9NZU5 365 aa20.35■□□□□ 0.85
LMNA-204ENST00000368298 DNAJB4Q9UDY4 337 aa20.35■□□□□ 0.85
LMNA-204ENST00000368298 TRANK1O15050 2925 aa20.35■□□□□ 0.85
LMNA-204ENST00000368298 SYCE3A1L190 88 aa20.34■□□□□ 0.85
LMNA-204ENST00000368298 ZC3H11AO75152 810 aaKnown RBP eCLIP20.34■□□□□ 0.85
LMNA-204ENST00000368298 ALDH2P05091 517 aa20.34■□□□□ 0.85
LMNA-204ENST00000368298 PLCB3Q01970 1234 aa20.34■□□□□ 0.85
LMNA-204ENST00000368298 TUSC3Q13454 348 aa20.34■□□□□ 0.85
LMNA-204ENST00000368298 ENOX2Q16206 610 aaKnown RBP20.34■□□□□ 0.85
LMNA-204ENST00000368298 ZNF658Q5TYW1 1059 aaPredicted RBP20.34■□□□□ 0.85
LMNA-204ENST00000368298 ARMCX5Q6P1M9 558 aa20.34■□□□□ 0.85
LMNA-204ENST00000368298 ERCC4Q92889 916 aaPredicted RBP20.34■□□□□ 0.85
LMNA-204ENST00000368298 CBWD1Q9BRT8 395 aa20.34■□□□□ 0.85
LMNA-204ENST00000368298 SPG21Q9NZD8 308 aa20.34■□□□□ 0.85
LMNA-204ENST00000368298 COL4A4P53420 1690 aaPredicted RBP20.34■□□□□ 0.85
LMNA-204ENST00000368298 PDCD11Q14690 1871 aaKnown RBP20.33■□□□□ 0.85
LMNA-204ENST00000368298 RFXAPO00287 272 aa20.33■□□□□ 0.85
LMNA-204ENST00000368298 PDXKO00764 312 aa20.33■□□□□ 0.85
LMNA-204ENST00000368298 FGF18O76093 207 aa20.33■□□□□ 0.85
LMNA-204ENST00000368298 ITGB1P05556 798 aa20.33■□□□□ 0.85
LMNA-204ENST00000368298 CXCL8P10145 99 aa20.33■□□□□ 0.85
LMNA-204ENST00000368298 SLC11A1P49279 550 aa20.33■□□□□ 0.85
LMNA-204ENST00000368298 ACOT2P49753 483 aa20.33■□□□□ 0.85
LMNA-204ENST00000368298 UBE3AQ05086 875 aa20.33■□□□□ 0.85
LMNA-204ENST00000368298 GPM6BQ13491 265 aa20.33■□□□□ 0.85
LMNA-204ENST00000368298 LRSAM1Q6UWE0 723 aa20.33■□□□□ 0.85
LMNA-204ENST00000368298 HS2ST1Q7LGA3 356 aa20.33■□□□□ 0.85
LMNA-204ENST00000368298 GOLGA5Q8TBA6 731 aa20.33■□□□□ 0.85
LMNA-204ENST00000368298 SPPL3Q8TCT6 385 aa20.33■□□□□ 0.85
LMNA-204ENST00000368298 FBXL18Q96ME1 805 aa20.33■□□□□ 0.85
LMNA-204ENST00000368298 ZMAT2Q96NC0 199 aaKnown RBP20.33■□□□□ 0.85
LMNA-204ENST00000368298 LMAN2LQ9H0V9 348 aa20.33■□□□□ 0.85
LMNA-204ENST00000368298 RPF1Q9H9Y2 349 aaKnown RBP20.33■□□□□ 0.85
LMNA-204ENST00000368298 LZTS1Q9Y250 596 aa20.33■□□□□ 0.85
LMNA-204ENST00000368298 GTF3C5Q9Y5Q8 519 aaPredicted RBP20.33■□□□□ 0.85
LMNA-204ENST00000368298 EXTL3O43909 919 aa20.32■□□□□ 0.84
LMNA-204ENST00000368298 ADGRE1Q14246 886 aa20.32■□□□□ 0.84
LMNA-204ENST00000368298 ZBTB6Q15916 424 aa20.32■□□□□ 0.84
LMNA-204ENST00000368298 GAS2L1Q99501 681 aaPredicted RBP20.32■□□□□ 0.84
LMNA-204ENST00000368298 CLSTN2Q9H4D0 955 aa20.32■□□□□ 0.84
LMNA-204ENST00000368298 ASB7Q9H672 318 aa20.32■□□□□ 0.84
LMNA-204ENST00000368298 KIAA1586Q9HCI6 787 aa20.32■□□□□ 0.84
LMNA-204ENST00000368298 SLC38A7Q9NVC3 462 aa20.32■□□□□ 0.84
LMNA-204ENST00000368298 TRAF3IP3Q9Y228 551 aa20.32■□□□□ 0.84
LMNA-204ENST00000368298 FAN1Q9Y2M0 1017 aa20.32■□□□□ 0.84
LMNA-204ENST00000368298 PLXNA4Q9HCM2 1894 aa20.32■□□□□ 0.84
LMNA-204ENST00000368298 NRP1O14786 923 aa20.31■□□□□ 0.84
LMNA-204ENST00000368298 PBX3P40426 434 aa20.31■□□□□ 0.84
LMNA-204ENST00000368298 PPP2R3AQ06190 1150 aa20.31■□□□□ 0.84
LMNA-204ENST00000368298 SLC9A9Q8IVB4 645 aa20.31■□□□□ 0.84
LMNA-204ENST00000368298 GPD1LQ8N335 351 aa20.31■□□□□ 0.84
LMNA-204ENST00000368298 GDPD5Q8WTR4 605 aa20.31■□□□□ 0.84
LMNA-204ENST00000368298 IGSF21Q96ID5 467 aa20.31■□□□□ 0.84
LMNA-204ENST00000368298 HSPBP1Q9NZL4 362 aa20.31■□□□□ 0.84
LMNA-204ENST00000368298 KIAA1468Q9P260 1216 aa20.31■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms