RNA–Protein interactions for RNA: ENST00000367478.8

TPR-201, Transcript of translocated promoter region, nuclear basket protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TPR, Length 9,708 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPR-201ENST00000367478 C19orf18Q8NEA5 215 aa13.07□□□□□ -0.32
TPR-201ENST00000367478 TMA16Q96EY4 203 aaKnown RBP13.07□□□□□ -0.32
TPR-201ENST00000367478 COQ7Q99807 217 aa13.07□□□□□ -0.32
TPR-201ENST00000367478 COPRSQ9NQ92 184 aa13.07□□□□□ -0.32
TPR-201ENST00000367478 CENPXA8MT69 81 aa13.07□□□□□ -0.32
TPR-201ENST00000367478 MYO1GB0I1T2 1018 aa13.07□□□□□ -0.32
TPR-201ENST00000367478 FKBP9O95302 570 aa13.07□□□□□ -0.32
TPR-201ENST00000367478 MYL2P10916 166 aa13.07□□□□□ -0.32
TPR-201ENST00000367478 FKBP9P1Q75LS8 142 aa13.07□□□□□ -0.32
TPR-201ENST00000367478 TAS2R42Q7RTR8 314 aa13.07□□□□□ -0.32
TPR-201ENST00000367478 RAD21L1Q9H4I0 556 aa13.07□□□□□ -0.32
TPR-201ENST00000367478 OSBPL3Q9H4L5 887 aa13.07□□□□□ -0.32
TPR-201ENST00000367478 TBC1D22BQ9NU19 505 aa13.07□□□□□ -0.32
TPR-201ENST00000367478 PSMC3IPQ9P2W1 217 aaPredicted RBP13.07□□□□□ -0.32
TPR-201ENST00000367478 TRIM24O15164 1050 aa13.07□□□□□ -0.32
TPR-201ENST00000367478 GUCA1AP43080 201 aaPredicted RBP13.07□□□□□ -0.32
TPR-201ENST00000367478 BCAMP50895 628 aa13.07□□□□□ -0.32
TPR-201ENST00000367478 Q3C1V9 767 aa13.07□□□□□ -0.32
TPR-201ENST00000367478 CATSPER4Q7RTX7 472 aa13.07□□□□□ -0.32
TPR-201ENST00000367478 TTC30BQ8N4P2 665 aa13.07□□□□□ -0.32
TPR-201ENST00000367478 AFG1LQ8WV93 481 aa13.07□□□□□ -0.32
TPR-201ENST00000367478 MLNP12872 115 aa13.07□□□□□ -0.32
TPR-201ENST00000367478 RGS2P41220 211 aa13.07□□□□□ -0.32
TPR-201ENST00000367478 RFFLQ8WZ73 363 aa13.07□□□□□ -0.32
TPR-201ENST00000367478 XPO6Q96QU8 1125 aaKnown RBP13.07□□□□□ -0.32
TPR-201ENST00000367478 TEX28O15482 410 aa13.07□□□□□ -0.32
TPR-201ENST00000367478 SFNP31947 248 aa13.07□□□□□ -0.32
TPR-201ENST00000367478 PPP1R18Q6NYC8 613 aa13.07□□□□□ -0.32
TPR-201ENST00000367478 MAP3K20Q9NYL2 800 aaKnown RBP13.07□□□□□ -0.32
TPR-201ENST00000367478 C6orf203Q9P0P8 240 aaPredicted RBP13.07□□□□□ -0.32
TPR-201ENST00000367478 HPS5Q9UPZ3 1129 aa13.07□□□□□ -0.32
TPR-201ENST00000367478 TRIM49P0CI25 452 aa13.06□□□□□ -0.32
TPR-201ENST00000367478 TRIM49CP0CI26 452 aa13.06□□□□□ -0.32
TPR-201ENST00000367478 ATXN8OSP0DMR3 200 aa13.06□□□□□ -0.32
TPR-201ENST00000367478 SERPINH1P50454 418 aaKnown RBP13.06□□□□□ -0.32
TPR-201ENST00000367478 ARSEP51690 589 aa13.06□□□□□ -0.32
TPR-201ENST00000367478 DSG1Q02413 1049 aa13.06□□□□□ -0.32
TPR-201ENST00000367478 TTC33Q6PID6 262 aaPredicted RBP13.06□□□□□ -0.32
TPR-201ENST00000367478 FAM180AQ6UWF9 173 aa13.06□□□□□ -0.32
TPR-201ENST00000367478 NUP93Q8N1F7 819 aa13.06□□□□□ -0.32
TPR-201ENST00000367478 PRMT1Q99873 361 aaKnown RBP13.06□□□□□ -0.32
TPR-201ENST00000367478 EXOSC4Q9NPD3 245 aaKnown RBP13.06□□□□□ -0.32
TPR-201ENST00000367478 TTC7AQ9ULT0 858 aaPredicted RBP13.06□□□□□ -0.32
TPR-201ENST00000367478 GPATCH8Q9UKJ3 1502 aaKnown RBP13.06□□□□□ -0.32
TPR-201ENST00000367478 C3orf70A6NLC5 250 aaPredicted RBP13.06□□□□□ -0.32
TPR-201ENST00000367478 IZUMO3Q5VZ72 239 aa13.06□□□□□ -0.32
TPR-201ENST00000367478 GPR141Q7Z602 305 aa13.06□□□□□ -0.32
TPR-201ENST00000367478 CXorf56Q9H5V9 222 aa13.06□□□□□ -0.32
TPR-201ENST00000367478 ERAP1Q9NZ08 941 aa13.06□□□□□ -0.32
TPR-201ENST00000367478 RGS5O15539 181 aa13.06□□□□□ -0.32
TPR-201ENST00000367478 SRP72O76094 671 aaKnown RBP13.06□□□□□ -0.32
TPR-201ENST00000367478 PEX3P56589 373 aa13.06□□□□□ -0.32
TPR-201ENST00000367478 MAPRE1Q15691 268 aaKnown RBP13.06□□□□□ -0.32
TPR-201ENST00000367478 C11orf88Q6PI97 169 aa13.06□□□□□ -0.32
TPR-201ENST00000367478 RCOR2Q8IZ40 523 aa13.06□□□□□ -0.32
TPR-201ENST00000367478 PPP1R37O75864 691 aa13.06□□□□□ -0.32
TPR-201ENST00000367478 MDH1P40925 334 aaKnown RBP13.06□□□□□ -0.32
TPR-201ENST00000367478 GYG1P46976 350 aa13.06□□□□□ -0.32
TPR-201ENST00000367478 PSMC6P62333 389 aa13.06□□□□□ -0.32
TPR-201ENST00000367478 C1DQ13901 141 aaKnown RBP13.06□□□□□ -0.32
TPR-201ENST00000367478 VEPH1Q14D04 833 aa13.06□□□□□ -0.32
TPR-201ENST00000367478 UNC45AQ9H3U1 944 aa13.06□□□□□ -0.32
TPR-201ENST00000367478 STON1Q9Y6Q2 735 aa13.06□□□□□ -0.32
TPR-201ENST00000367478 CDK17Q00537 523 aa13.06□□□□□ -0.32
TPR-201ENST00000367478 CUL4AQ13619 759 aa13.06□□□□□ -0.32
TPR-201ENST00000367478 SYTL3Q4VX76 610 aa13.06□□□□□ -0.32
TPR-201ENST00000367478 AGBL2Q5U5Z8 902 aa13.06□□□□□ -0.32
TPR-201ENST00000367478 TRPM8Q7Z2W7 1104 aa13.06□□□□□ -0.32
TPR-201ENST00000367478 FAM45AQ8TCE6 357 aa13.06□□□□□ -0.32
TPR-201ENST00000367478 PGBD4Q96DM1 585 aa13.06□□□□□ -0.32
TPR-201ENST00000367478 FRMD8Q9BZ67 464 aaPredicted RBP13.06□□□□□ -0.32
TPR-201ENST00000367478 PALD1Q9ULE6 856 aa13.06□□□□□ -0.32
TPR-201ENST00000367478 PDZK1P1A8MUH7 402 aa13.06□□□□□ -0.32
TPR-201ENST00000367478 KCNH2Q12809 1159 aa13.06□□□□□ -0.32
TPR-201ENST00000367478 PLA2G4AP47712 749 aa13.06□□□□□ -0.32
TPR-201ENST00000367478 DMAP1Q9NPF5 467 aaPredicted RBP13.06□□□□□ -0.32
TPR-201ENST00000367478 STK36Q9NRP7 1315 aa13.06□□□□□ -0.32
TPR-201ENST00000367478 CLASP1Q7Z460 1538 aa13.06□□□□□ -0.32
TPR-201ENST00000367478 VHLP40337 213 aa13.06□□□□□ -0.32
TPR-201ENST00000367478 OSTNP61366 133 aa13.06□□□□□ -0.32
TPR-201ENST00000367478 LRRC8DQ7L1W4 858 aa13.06□□□□□ -0.32
TPR-201ENST00000367478 FAM20AQ96MK3 541 aa13.06□□□□□ -0.32
TPR-201ENST00000367478 C17orf80Q9BSJ5 609 aa13.05□□□□□ -0.32
TPR-201ENST00000367478 MRPL4Q9BYD3 311 aaKnown RBP13.05□□□□□ -0.32
TPR-201ENST00000367478 VPS33BQ9H267 617 aa13.05□□□□□ -0.32
TPR-201ENST00000367478 PIGUQ9H490 435 aa13.05□□□□□ -0.32
TPR-201ENST00000367478 VAMP7P51809 220 aa13.05□□□□□ -0.32
TPR-201ENST00000367478 RCAN1P53805 252 aa13.05□□□□□ -0.32
TPR-201ENST00000367478 EIF4A1P60842 406 aaKnown RBP13.05□□□□□ -0.32
TPR-201ENST00000367478 CHRNDQ07001 517 aa13.05□□□□□ -0.32
TPR-201ENST00000367478 DCAF4Q8WV16 495 aa13.05□□□□□ -0.32
TPR-201ENST00000367478 CASP10Q92851 521 aa13.05□□□□□ -0.32
TPR-201ENST00000367478 CNDP1Q96KN2 507 aa13.05□□□□□ -0.32
TPR-201ENST00000367478 USP44Q9H0E7 712 aa13.05□□□□□ -0.32
TPR-201ENST00000367478 FBXO40Q9UH90 709 aa13.05□□□□□ -0.32
TPR-201ENST00000367478 TRPC5OSA6NMA1 111 aa13.05□□□□□ -0.32
TPR-201ENST00000367478 SH2B2O14492 632 aaPredicted RBP13.05□□□□□ -0.32
TPR-201ENST00000367478 KIAA0391O15091 583 aaKnown RBP13.05□□□□□ -0.32
TPR-201ENST00000367478 ENO3P13929 434 aaPredicted RBP13.05□□□□□ -0.32
TPR-201ENST00000367478 IREB2P48200 963 aaKnown RBP13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 57.6 ms