RNA–Protein interactions for RNA: ENST00000367279.8

PTPN7-202, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPN7, Length 3,265 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-202ENST00000367279 RMDN3Q96TC7 470 aa13.19□□□□□ -0.3
PTPN7-202ENST00000367279 KLHL11Q9NVR0 708 aa13.19□□□□□ -0.3
PTPN7-202ENST00000367279 GTF3C4Q9UKN8 822 aa13.19□□□□□ -0.3
PTPN7-202ENST00000367279 PCDHA3Q9Y5H8 950 aa13.19□□□□□ -0.3
PTPN7-202ENST00000367279 SLX4Q8IY92 1834 aa13.19□□□□□ -0.3
PTPN7-202ENST00000367279 CCT8L1PA6NM43 557 aa13.19□□□□□ -0.3
PTPN7-202ENST00000367279 P4HA2O15460 535 aa13.19□□□□□ -0.3
PTPN7-202ENST00000367279 DHX15O43143 795 aaKnown RBP13.19□□□□□ -0.3
PTPN7-202ENST00000367279 ICAM1P05362 532 aa13.19□□□□□ -0.3
PTPN7-202ENST00000367279 PAEPP09466 180 aa13.19□□□□□ -0.3
PTPN7-202ENST00000367279 HARSP12081 509 aaKnown RBP13.19□□□□□ -0.3
PTPN7-202ENST00000367279 GZMAP12544 262 aa13.19□□□□□ -0.3
PTPN7-202ENST00000367279 ADSSP30520 456 aa13.19□□□□□ -0.3
PTPN7-202ENST00000367279 MMP13P45452 471 aa13.19□□□□□ -0.3
PTPN7-202ENST00000367279 NPTX2P47972 431 aa13.19□□□□□ -0.3
PTPN7-202ENST00000367279 RPS6P62753 249 aaKnown RBP13.19□□□□□ -0.3
PTPN7-202ENST00000367279 AUHQ13825 339 aaKnown RBP13.19□□□□□ -0.3
PTPN7-202ENST00000367279 CAPN12Q6ZSI9 719 aa13.19□□□□□ -0.3
PTPN7-202ENST00000367279 SEPT14Q6ZU15 432 aa13.19□□□□□ -0.3
PTPN7-202ENST00000367279 TBC1D1Q86TI0 1168 aaPredicted RBP13.19□□□□□ -0.3
PTPN7-202ENST00000367279 PRUNE1Q86TP1 453 aa13.19□□□□□ -0.3
PTPN7-202ENST00000367279 PARP9Q8IXQ6 854 aa13.19□□□□□ -0.3
PTPN7-202ENST00000367279 NSRP1Q9H0G5 558 aaKnown RBP13.19□□□□□ -0.3
PTPN7-202ENST00000367279 NRXN2Q9P2S2 1712 aa13.18□□□□□ -0.3
PTPN7-202ENST00000367279 ASTN2O75129 1339 aaPredicted RBP13.18□□□□□ -0.3
PTPN7-202ENST00000367279 GGPS1O95749 300 aa13.18□□□□□ -0.3
PTPN7-202ENST00000367279 RARGP13631 454 aa13.18□□□□□ -0.3
PTPN7-202ENST00000367279 DRG2P55039 364 aaKnown RBP13.18□□□□□ -0.3
PTPN7-202ENST00000367279 GTF2BQ00403 316 aa13.18□□□□□ -0.3
PTPN7-202ENST00000367279 DRP2Q13474 957 aa13.18□□□□□ -0.3
PTPN7-202ENST00000367279 MYBPC2Q14324 1141 aa13.18□□□□□ -0.3
PTPN7-202ENST00000367279 HP1BP3Q5SSJ5 553 aaPredicted RBP13.18□□□□□ -0.3
PTPN7-202ENST00000367279 SV2AQ7L0J3 742 aa13.18□□□□□ -0.3
PTPN7-202ENST00000367279 PARD3BQ8TEW8 1205 aa13.18□□□□□ -0.3
PTPN7-202ENST00000367279 SHC3Q92529 594 aa13.18□□□□□ -0.3
PTPN7-202ENST00000367279 VTI1AQ96AJ9 217 aa13.18□□□□□ -0.3
PTPN7-202ENST00000367279 IWS1Q96ST2 819 aa13.18□□□□□ -0.3
PTPN7-202ENST00000367279 GGA2Q9UJY4 613 aa13.18□□□□□ -0.3
PTPN7-202ENST00000367279 TCP11X1B4DZS4 312 aa13.18□□□□□ -0.3
PTPN7-202ENST00000367279 ATF2P15336 505 aa13.18□□□□□ -0.3
PTPN7-202ENST00000367279 RRM1P23921 792 aa13.18□□□□□ -0.3
PTPN7-202ENST00000367279 GBP1P32455 592 aa13.18□□□□□ -0.3
PTPN7-202ENST00000367279 KAZNQ674X7 775 aa13.18□□□□□ -0.3
PTPN7-202ENST00000367279 NUGGCQ68CJ6 796 aa13.18□□□□□ -0.3
PTPN7-202ENST00000367279 ACAD10Q6JQN1 1059 aa13.18□□□□□ -0.3
PTPN7-202ENST00000367279 FUKQ8N0W3 1084 aa13.18□□□□□ -0.3
PTPN7-202ENST00000367279 C3orf20Q8ND61 904 aa13.18□□□□□ -0.3
PTPN7-202ENST00000367279 ATXN2LQ8WWM7 1075 aaKnown RBP13.18□□□□□ -0.3
PTPN7-202ENST00000367279 RUNDC3BQ96NL0 473 aa13.18□□□□□ -0.3
PTPN7-202ENST00000367279 ADAM7Q9H2U9 754 aa13.18□□□□□ -0.3
PTPN7-202ENST00000367279 C1orf112Q9NSG2 853 aa13.18□□□□□ -0.3
PTPN7-202ENST00000367279 CHUKO15111 745 aa13.17□□□□□ -0.3
PTPN7-202ENST00000367279 NF2P35240 595 aa13.17□□□□□ -0.3
PTPN7-202ENST00000367279 MAP2K2P36507 400 aa13.17□□□□□ -0.3
PTPN7-202ENST00000367279 ITGA8P53708 1063 aa13.17□□□□□ -0.3
PTPN7-202ENST00000367279 PSMC5P62195 406 aa13.17□□□□□ -0.3
PTPN7-202ENST00000367279 SPOPLQ6IQ16 392 aa13.17□□□□□ -0.3
PTPN7-202ENST00000367279 CYP4F22Q6NT55 531 aa13.17□□□□□ -0.3
PTPN7-202ENST00000367279 RSBN1LQ6PCB5 846 aaPredicted RBP13.17□□□□□ -0.3
PTPN7-202ENST00000367279 B3GNT9Q6UX72 402 aa13.17□□□□□ -0.3
PTPN7-202ENST00000367279 MCF2L2Q86YR7 1114 aa13.17□□□□□ -0.3
PTPN7-202ENST00000367279 SYTL5Q8TDW5 730 aaPredicted RBP13.17□□□□□ -0.3
PTPN7-202ENST00000367279 ART4Q93070 314 aa13.17□□□□□ -0.3
PTPN7-202ENST00000367279 THOC1Q96FV9 657 aaKnown RBP13.17□□□□□ -0.3
PTPN7-202ENST00000367279 C11orf70Q9BRQ4 267 aa13.17□□□□□ -0.3
PTPN7-202ENST00000367279 TMEM8AQ9HCN3 771 aa13.17□□□□□ -0.3
PTPN7-202ENST00000367279 HOMER3Q9NSC5 361 aa13.17□□□□□ -0.3
PTPN7-202ENST00000367279 FGFR1OP2Q9NVK5 253 aa13.17□□□□□ -0.3
PTPN7-202ENST00000367279 GABBR1Q9UBS5 961 aa13.17□□□□□ -0.3
PTPN7-202ENST00000367279 ANAPC5Q9UJX4 755 aa13.17□□□□□ -0.3
PTPN7-202ENST00000367279 TMEM120BA0PK00 339 aa13.17□□□□□ -0.3
PTPN7-202ENST00000367279 C5orf60A6NFR6 353 aa13.17□□□□□ -0.3
PTPN7-202ENST00000367279 ONECUT3O60422 494 aaPredicted RBP13.17□□□□□ -0.3
PTPN7-202ENST00000367279 NSFP46459 744 aaKnown RBP13.17□□□□□ -0.3
PTPN7-202ENST00000367279 HADHBP55084 474 aaKnown RBP13.17□□□□□ -0.3
PTPN7-202ENST00000367279 IRX3P78415 501 aaPredicted RBP13.17□□□□□ -0.3
PTPN7-202ENST00000367279 ZNF365Q70YC5 407 aa13.17□□□□□ -0.3
PTPN7-202ENST00000367279 CYFIP1Q7L576 1253 aa13.17□□□□□ -0.3
PTPN7-202ENST00000367279 NLRX1Q86UT6 975 aa13.17□□□□□ -0.3
PTPN7-202ENST00000367279 EXOC3L1Q86VI1 746 aa13.17□□□□□ -0.3
PTPN7-202ENST00000367279 HELQQ8TDG4 1101 aa13.17□□□□□ -0.3
PTPN7-202ENST00000367279 CCT6BQ92526 530 aa13.17□□□□□ -0.3
PTPN7-202ENST00000367279 FNBP1Q96RU3 617 aa13.17□□□□□ -0.3
PTPN7-202ENST00000367279 UVRAGQ9P2Y5 699 aa13.17□□□□□ -0.3
PTPN7-202ENST00000367279 SEPT9Q9UHD8 586 aaPredicted RBP13.17□□□□□ -0.3
PTPN7-202ENST00000367279 WDR64B1ANS9 1081 aa13.17□□□□□ -0.3
PTPN7-202ENST00000367279 GJB6O95452 261 aa13.17□□□□□ -0.3
PTPN7-202ENST00000367279 GAS8O95995 478 aa13.17□□□□□ -0.3
PTPN7-202ENST00000367279 CYP1A2P05177 515 aa13.17□□□□□ -0.3
PTPN7-202ENST00000367279 ASNSP08243 561 aa13.17□□□□□ -0.3
PTPN7-202ENST00000367279 CD58P19256 250 aa13.17□□□□□ -0.3
PTPN7-202ENST00000367279 CCDC63Q8NA47 563 aa13.17□□□□□ -0.3
PTPN7-202ENST00000367279 BSNDQ8WZ55 320 aa13.17□□□□□ -0.3
PTPN7-202ENST00000367279 ZKSCAN4Q969J2 545 aaPredicted RBP13.17□□□□□ -0.3
PTPN7-202ENST00000367279 C9orf72Q96LT7 481 aa13.17□□□□□ -0.3
PTPN7-202ENST00000367279 ZNF317Q96PQ6 595 aaPredicted RBP13.17□□□□□ -0.3
PTPN7-202ENST00000367279 ADAM33Q9BZ11 813 aa13.17□□□□□ -0.3
PTPN7-202ENST00000367279 TBC1D22BQ9NU19 505 aa13.17□□□□□ -0.3
PTPN7-202ENST00000367279 RASSF9O75901 435 aa13.16□□□□□ -0.3
PTPN7-202ENST00000367279 CCNE2O96020 404 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms