RNA–Protein interactions for RNA: ENST00000366857.9

CNIH4-202, Transcript of cornichon family AMPA receptor auxiliary protein 4, humanhuman

TSL 1 (best) BASIC

Gene CNIH4, Length 3,963 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNIH4-202ENST00000366857 KRT39Q6A163 491 aa10.07□□□□□ -0.8
CNIH4-202ENST00000366857 C11orf63Q6NUN7 778 aa10.07□□□□□ -0.8
CNIH4-202ENST00000366857 SRGAP1Q7Z6B7 1085 aa10.07□□□□□ -0.8
CNIH4-202ENST00000366857 SLC47A2Q86VL8 602 aa10.07□□□□□ -0.8
CNIH4-202ENST00000366857 DNAAF5Q86Y56 855 aa10.07□□□□□ -0.8
CNIH4-202ENST00000366857 NEK11Q8NG66 645 aa10.07□□□□□ -0.8
CNIH4-202ENST00000366857 CDT1Q9H211 546 aa10.07□□□□□ -0.8
CNIH4-202ENST00000366857 ERAP1Q9NZ08 941 aa10.07□□□□□ -0.8
CNIH4-202ENST00000366857 CNTN3Q9P232 1028 aa10.07□□□□□ -0.8
CNIH4-202ENST00000366857 SMIM35A0A1B0GVV1 85 aa10.06□□□□□ -0.8
CNIH4-202ENST00000366857 H0YCG3 227 aa10.06□□□□□ -0.8
CNIH4-202ENST00000366857 TXNP10599 105 aaKnown RBP10.06□□□□□ -0.8
CNIH4-202ENST00000366857 TRIM21P19474 475 aaKnown RBP10.06□□□□□ -0.8
CNIH4-202ENST00000366857 CYP3A5P20815 502 aa10.06□□□□□ -0.8
CNIH4-202ENST00000366857 PLCB2Q00722 1185 aa10.06□□□□□ -0.8
CNIH4-202ENST00000366857 TTLL4Q14679 1199 aa10.06□□□□□ -0.8
CNIH4-202ENST00000366857 FKBP15Q5T1M5 1219 aa10.06□□□□□ -0.8
CNIH4-202ENST00000366857 FBXO38Q6PIJ6 1188 aa10.06□□□□□ -0.8
CNIH4-202ENST00000366857 C7orf31Q8N865 590 aa10.06□□□□□ -0.8
CNIH4-202ENST00000366857 NOA1Q8NC60 698 aaKnown RBP10.06□□□□□ -0.8
CNIH4-202ENST00000366857 ACTRT1Q8TDG2 376 aa10.06□□□□□ -0.8
CNIH4-202ENST00000366857 SAAL1Q96ER3 474 aa10.06□□□□□ -0.8
CNIH4-202ENST00000366857 CRACR2AQ9BSW2 395 aa10.06□□□□□ -0.8
CNIH4-202ENST00000366857 JRKLQ9Y4A0 524 aa10.06□□□□□ -0.8
CNIH4-202ENST00000366857 TMEM88BA6NKF7 163 aa10.06□□□□□ -0.8
CNIH4-202ENST00000366857 ASAP2O43150 1006 aa10.06□□□□□ -0.8
CNIH4-202ENST00000366857 SLU7O95391 586 aaKnown RBP10.06□□□□□ -0.8
CNIH4-202ENST00000366857 GH1P01241 217 aa10.06□□□□□ -0.8
CNIH4-202ENST00000366857 INSRRP14616 1297 aa10.06□□□□□ -0.8
CNIH4-202ENST00000366857 NF2P35240 595 aa10.06□□□□□ -0.8
CNIH4-202ENST00000366857 EFNA5P52803 228 aa10.06□□□□□ -0.8
CNIH4-202ENST00000366857 MYL7Q01449 175 aa10.06□□□□□ -0.8
CNIH4-202ENST00000366857 CYP1B1Q16678 543 aa10.06□□□□□ -0.8
CNIH4-202ENST00000366857 LMBR1Q8WVP7 490 aa10.06□□□□□ -0.8
CNIH4-202ENST00000366857 TRIB2Q92519 343 aa10.06□□□□□ -0.8
CNIH4-202ENST00000366857 RUBCNQ92622 972 aa10.06□□□□□ -0.8
CNIH4-202ENST00000366857 KHSRPQ92945 711 aaKnown RBP eCLIP10.06□□□□□ -0.81e-11■■■■□ 19.9
CNIH4-202ENST00000366857 SPATA33Q96N06 139 aa10.06□□□□□ -0.8
CNIH4-202ENST00000366857 TSGA10Q9BZW7 698 aa10.06□□□□□ -0.8
CNIH4-202ENST00000366857 ARHGAP39Q9C0H5 1083 aa10.06□□□□□ -0.8
CNIH4-202ENST00000366857 PCIF1Q9H4Z3 704 aa10.06□□□□□ -0.8
CNIH4-202ENST00000366857 N4BP1O75113 896 aaKnown RBP10.06□□□□□ -0.8
CNIH4-202ENST00000366857 PTMAP06454 111 aaKnown RBP10.06□□□□□ -0.8
CNIH4-202ENST00000366857 CYP11B1P15538 503 aa10.06□□□□□ -0.8
CNIH4-202ENST00000366857 KRT83P78385 493 aa10.06□□□□□ -0.8
CNIH4-202ENST00000366857 EIF4EBP2Q13542 120 aaPredicted RBP10.06□□□□□ -0.8
CNIH4-202ENST00000366857 PCBP1Q15365 356 aaKnown RBP eCLIP10.06□□□□□ -0.8
CNIH4-202ENST00000366857 FAM160B1Q5W0V3 765 aa10.06□□□□□ -0.8
CNIH4-202ENST00000366857 EEF1DP3Q658K8 133 aa10.06□□□□□ -0.8
CNIH4-202ENST00000366857 EXOC8Q8IYI6 725 aa10.06□□□□□ -0.8
CNIH4-202ENST00000366857 FAM71BQ8TC56 605 aa10.06□□□□□ -0.8
CNIH4-202ENST00000366857 PKMYT1Q99640 499 aa10.06□□□□□ -0.8
CNIH4-202ENST00000366857 KCNG1Q9UIX4 513 aa10.06□□□□□ -0.8
CNIH4-202ENST00000366857 MTERF2Q49AM1 385 aa10.05□□□□□ -0.8
CNIH4-202ENST00000366857 ARFGAP1Q8N6T3 406 aa10.05□□□□□ -0.8
CNIH4-202ENST00000366857 CALR3Q96L12 384 aaKnown RBP10.05□□□□□ -0.8
CNIH4-202ENST00000366857 ZMAT2Q96NC0 199 aaKnown RBP10.05□□□□□ -0.8
CNIH4-202ENST00000366857 AGPAT1Q99943 283 aa10.05□□□□□ -0.8
CNIH4-202ENST00000366857 ACP6Q9NPH0 428 aa10.05□□□□□ -0.8
CNIH4-202ENST00000366857 TARSL2A2RTX5 802 aaKnown RBP10.05□□□□□ -0.8
CNIH4-202ENST00000366857 ZNF185O15231 689 aa10.05□□□□□ -0.8
CNIH4-202ENST00000366857 FERP16591 822 aa10.05□□□□□ -0.8
CNIH4-202ENST00000366857 KLF1Q13351 362 aaPredicted RBP10.05□□□□□ -0.8
CNIH4-202ENST00000366857 DSC3Q14574 896 aa10.05□□□□□ -0.8
CNIH4-202ENST00000366857 BEND6Q5SZJ8 279 aaPredicted RBP10.05□□□□□ -0.8
CNIH4-202ENST00000366857 MPZL3Q6UWV2 235 aa10.05□□□□□ -0.8
CNIH4-202ENST00000366857 SUCLA2Q9P2R7 463 aaPredicted RBP10.05□□□□□ -0.8
CNIH4-202ENST00000366857 CA12O43570 354 aa10.05□□□□□ -0.8
CNIH4-202ENST00000366857 TBC1D8O95759 1140 aa10.05□□□□□ -0.8
CNIH4-202ENST00000366857 CTNNA2P26232 953 aa10.05□□□□□ -0.8
CNIH4-202ENST00000366857 AARSP49588 968 aaKnown RBP eCLIP10.05□□□□□ -0.89e-7■■■■■ 61.1
CNIH4-202ENST00000366857 CYP2J2P51589 502 aa10.05□□□□□ -0.8
CNIH4-202ENST00000366857 ARSEP51690 589 aa10.05□□□□□ -0.8
CNIH4-202ENST00000366857 CDR2Q01850 454 aa10.05□□□□□ -0.8
CNIH4-202ENST00000366857 WHAMMP3Q1A5X7 153 aa10.05□□□□□ -0.8
CNIH4-202ENST00000366857 CLEC16AQ2KHT3 1053 aa10.05□□□□□ -0.8
CNIH4-202ENST00000366857 LHX8Q68G74 356 aa10.05□□□□□ -0.8
CNIH4-202ENST00000366857 ZNF410Q86VK4 478 aa10.05□□□□□ -0.8
CNIH4-202ENST00000366857 PHF13Q86YI8 300 aaPredicted RBP10.05□□□□□ -0.8
CNIH4-202ENST00000366857 AFG1LQ8WV93 481 aa10.05□□□□□ -0.8
CNIH4-202ENST00000366857 PIK3R5Q8WYR1 880 aa10.05□□□□□ -0.8
CNIH4-202ENST00000366857 APBA2Q99767 749 aa10.05□□□□□ -0.8
CNIH4-202ENST00000366857 LZTFL1Q9NQ48 299 aa10.05□□□□□ -0.8
CNIH4-202ENST00000366857 GDF3Q9NR23 364 aa10.05□□□□□ -0.8
CNIH4-202ENST00000366857 DERAQ9Y315 318 aa10.05□□□□□ -0.8
CNIH4-202ENST00000366857 CLSTN1O94985 981 aa10.04□□□□□ -0.8
CNIH4-202ENST00000366857 ARF4P18085 180 aaPredicted RBP10.04□□□□□ -0.8
CNIH4-202ENST00000366857 KCTD2Q14681 263 aa10.04□□□□□ -0.8
CNIH4-202ENST00000366857 C1orf127Q8N9H9 656 aa10.04□□□□□ -0.8
CNIH4-202ENST00000366857 SMG8Q8ND04 991 aaKnown RBP10.04□□□□□ -0.8
CNIH4-202ENST00000366857 FBXL13Q8NEE6 735 aa10.04□□□□□ -0.8
CNIH4-202ENST00000366857 TCP11Q8WWU5 503 aa10.04□□□□□ -0.8
CNIH4-202ENST00000366857 HERPUD2Q9BSE4 406 aa10.04□□□□□ -0.8
CNIH4-202ENST00000366857 TARS2Q9BW92 718 aaKnown RBP10.04□□□□□ -0.8
CNIH4-202ENST00000366857 COL4A3Q01955 1670 aa10.04□□□□□ -0.8
CNIH4-202ENST00000366857 CAPN15O75808 1086 aa10.04□□□□□ -0.8
CNIH4-202ENST00000366857 MOCS3O95396 460 aa10.04□□□□□ -0.8
CNIH4-202ENST00000366857 GCLMP48507 274 aa10.04□□□□□ -0.8
CNIH4-202ENST00000366857 STXBP4Q6ZWJ1 553 aa10.04□□□□□ -0.8
CNIH4-202ENST00000366857 RABGGTAQ92696 567 aa10.04□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms