RNA–Protein interactions for RNA: ENST00000366764.6

CDC42BPA-202, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 1 (best) BASIC

Gene CDC42BPA, Length 10,445 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-202ENST00000366764 NVLO15381 856 aaKnown RBP12.48□□□□□ -0.41
CDC42BPA-202ENST00000366764 PYGBP11216 843 aa12.48□□□□□ -0.41
CDC42BPA-202ENST00000366764 SERPINB9P50453 376 aa12.48□□□□□ -0.41
CDC42BPA-202ENST00000366764 MEI1Q5TIA1 1274 aa12.48□□□□□ -0.41
CDC42BPA-202ENST00000366764 ZNF746Q6NUN9 644 aaPredicted RBP12.48□□□□□ -0.41
CDC42BPA-202ENST00000366764 ZC3H11AO75152 810 aaKnown RBP eCLIP12.48□□□□□ -0.414e-6■■□□□ 14.4
CDC42BPA-202ENST00000366764 NTSR2O95665 410 aa12.48□□□□□ -0.41
CDC42BPA-202ENST00000366764 TRIM51Q9BSJ1 452 aa12.48□□□□□ -0.41
CDC42BPA-202ENST00000366764 LPAR1Q92633 364 aa12.48□□□□□ -0.41
CDC42BPA-202ENST00000366764 NXF1Q9UBU9 619 aaKnown RBP12.48□□□□□ -0.41
CDC42BPA-202ENST00000366764 SCTRP47872 440 aa12.48□□□□□ -0.41
CDC42BPA-202ENST00000366764 CASP7P55210 303 aa12.48□□□□□ -0.41
CDC42BPA-202ENST00000366764 UBXN2AP68543 259 aa12.48□□□□□ -0.41
CDC42BPA-202ENST00000366764 HDAC11Q96DB2 347 aa12.48□□□□□ -0.41
CDC42BPA-202ENST00000366764 ZNF341Q9BYN7 854 aa12.48□□□□□ -0.41
CDC42BPA-202ENST00000366764 AFG3L2Q9Y4W6 797 aa12.48□□□□□ -0.41
CDC42BPA-202ENST00000366764 KPNB1Q14974 876 aaKnown RBP12.48□□□□□ -0.41
CDC42BPA-202ENST00000366764 SNRNP35Q16560 246 aaKnown RBP12.48□□□□□ -0.41
CDC42BPA-202ENST00000366764 SLC30A9Q6PML9 568 aa12.48□□□□□ -0.41
CDC42BPA-202ENST00000366764 PCDHA10Q9Y5I2 948 aa12.48□□□□□ -0.41
CDC42BPA-202ENST00000366764 GHRP10912 638 aa12.48□□□□□ -0.41
CDC42BPA-202ENST00000366764 SDC4P31431 198 aa12.48□□□□□ -0.41
CDC42BPA-202ENST00000366764 P3H1Q32P28 736 aa12.48□□□□□ -0.41
CDC42BPA-202ENST00000366764 RTKN2Q8IZC4 609 aa12.48□□□□□ -0.41
CDC42BPA-202ENST00000366764 CPVLQ9H3G5 476 aa12.48□□□□□ -0.41
CDC42BPA-202ENST00000366764 ZNF446Q9NWS9 450 aa12.48□□□□□ -0.41
CDC42BPA-202ENST00000366764 AKR1B1P15121 316 aa12.48□□□□□ -0.41
CDC42BPA-202ENST00000366764 NCF2P19878 526 aaPredicted RBP12.48□□□□□ -0.41
CDC42BPA-202ENST00000366764 PHKA2P46019 1235 aa12.48□□□□□ -0.41
CDC42BPA-202ENST00000366764 SUPT20HL1Q3ZLR7 823 aa12.48□□□□□ -0.41
CDC42BPA-202ENST00000366764 CD302Q8IX05 232 aa12.48□□□□□ -0.41
CDC42BPA-202ENST00000366764 SIX6OS1Q8N1H7 587 aa12.48□□□□□ -0.41
CDC42BPA-202ENST00000366764 RDM1Q8NG50 284 aa12.48□□□□□ -0.41
CDC42BPA-202ENST00000366764 SCG3Q8WXD2 468 aaKnown RBP12.48□□□□□ -0.41
CDC42BPA-202ENST00000366764 HEXIM2Q96MH2 286 aaKnown RBP12.48□□□□□ -0.41
CDC42BPA-202ENST00000366764 TSSK1BQ9BXA7 367 aa12.48□□□□□ -0.41
CDC42BPA-202ENST00000366764 PDP2Q9P2J9 529 aa12.48□□□□□ -0.41
CDC42BPA-202ENST00000366764 TRPC5Q9UL62 973 aaPredicted RBP12.48□□□□□ -0.41
CDC42BPA-202ENST00000366764 PARP4Q9UKK3 1724 aaKnown RBP12.48□□□□□ -0.41
CDC42BPA-202ENST00000366764 PLEKP08567 350 aaPredicted RBP12.48□□□□□ -0.41
CDC42BPA-202ENST00000366764 CD58P19256 250 aa12.48□□□□□ -0.41
CDC42BPA-202ENST00000366764 EIF2AK2P19525 551 aaKnown RBP12.48□□□□□ -0.41
CDC42BPA-202ENST00000366764 PTENP60484 403 aa12.48□□□□□ -0.41
CDC42BPA-202ENST00000366764 LLGL1Q15334 1064 aa12.48□□□□□ -0.41
CDC42BPA-202ENST00000366764 MAPRE2Q15555 327 aa12.48□□□□□ -0.41
CDC42BPA-202ENST00000366764 DCTN4Q9UJW0 460 aa12.48□□□□□ -0.41
CDC42BPA-202ENST00000366764 CNTNAP4Q9C0A0 1308 aa12.48□□□□□ -0.41
CDC42BPA-202ENST00000366764 IGSF9BQ9UPX0 1349 aa12.48□□□□□ -0.41
CDC42BPA-202ENST00000366764 SLC16A4O15374 487 aa12.47□□□□□ -0.41
CDC42BPA-202ENST00000366764 PGM1P36871 562 aa12.47□□□□□ -0.41
CDC42BPA-202ENST00000366764 C1orf54Q8WWF1 131 aa12.47□□□□□ -0.41
CDC42BPA-202ENST00000366764 MAGEB18Q96M61 343 aa12.47□□□□□ -0.41
CDC42BPA-202ENST00000366764 CRAMP1Q96RY5 1269 aa12.47□□□□□ -0.41
CDC42BPA-202ENST00000366764 MTRQ99707 1265 aa12.47□□□□□ -0.41
CDC42BPA-202ENST00000366764 KIFC3Q9BVG8 833 aa12.47□□□□□ -0.41
CDC42BPA-202ENST00000366764 HEMGNQ9BXL5 484 aa12.47□□□□□ -0.41
CDC42BPA-202ENST00000366764 MRPL4Q9BYD3 311 aaKnown RBP12.47□□□□□ -0.41
CDC42BPA-202ENST00000366764 SFI1A8K8P3 1242 aa12.47□□□□□ -0.41
CDC42BPA-202ENST00000366764 SASH3O75995 380 aa12.47□□□□□ -0.41
CDC42BPA-202ENST00000366764 DMGDHQ9UI17 866 aaKnown RBP12.47□□□□□ -0.41
CDC42BPA-202ENST00000366764 GJA3Q9Y6H8 435 aa12.47□□□□□ -0.41
CDC42BPA-202ENST00000366764 PIK3R2O00459 728 aa12.47□□□□□ -0.41
CDC42BPA-202ENST00000366764 COPB2P35606 906 aa12.47□□□□□ -0.41
CDC42BPA-202ENST00000366764 BCAR1P56945 870 aa12.47□□□□□ -0.41
CDC42BPA-202ENST00000366764 ITPRIPL1Q6GPH6 555 aa12.47□□□□□ -0.41
CDC42BPA-202ENST00000366764 TCRBV5S4A2TA0A5A2 114 aa12.47□□□□□ -0.41
CDC42BPA-202ENST00000366764 MORF4L2Q15014 288 aa12.47□□□□□ -0.41
CDC42BPA-202ENST00000366764 STILQ15468 1287 aa12.47□□□□□ -0.41
CDC42BPA-202ENST00000366764 SLC27A3Q5K4L6 730 aa12.47□□□□□ -0.41
CDC42BPA-202ENST00000366764 TRIM56Q9BRZ2 755 aaKnown RBP12.47□□□□□ -0.41
CDC42BPA-202ENST00000366764 FGFR2P21802 821 aa12.47□□□□□ -0.41
CDC42BPA-202ENST00000366764 CCNYQ8ND76 341 aa12.47□□□□□ -0.41
CDC42BPA-202ENST00000366764 TBRG4Q969Z0 631 aaKnown RBP eCLIP12.47□□□□□ -0.41
CDC42BPA-202ENST00000366764 NOD2Q9HC29 1040 aa12.47□□□□□ -0.41
CDC42BPA-202ENST00000366764 CHEK2O96017 543 aa12.47□□□□□ -0.41
CDC42BPA-202ENST00000366764 PSMC1P62191 440 aaKnown RBP12.47□□□□□ -0.41
CDC42BPA-202ENST00000366764 LARP7Q4G0J3 582 aaKnown RBP eCLIP12.47□□□□□ -0.41
CDC42BPA-202ENST00000366764 SLC13A5Q86YT5 568 aaPredicted RBP12.47□□□□□ -0.41
CDC42BPA-202ENST00000366764 PDZD8Q8NEN9 1154 aa12.47□□□□□ -0.41
CDC42BPA-202ENST00000366764 NACA2Q9H009 215 aa12.47□□□□□ -0.41
CDC42BPA-202ENST00000366764 ZWILCHQ9H900 591 aa12.47□□□□□ -0.41
CDC42BPA-202ENST00000366764 SRP68Q9UHB9 627 aaKnown RBP12.47□□□□□ -0.41
CDC42BPA-202ENST00000366764 SLC29A2Q14542 456 aa12.47□□□□□ -0.41
CDC42BPA-202ENST00000366764 LRRC4Q9HBW1 653 aa12.47□□□□□ -0.41
CDC42BPA-202ENST00000366764 A0A0G2JLW4 131 aa12.47□□□□□ -0.41
CDC42BPA-202ENST00000366764 GOLGA8IPA6NC78 632 aa12.47□□□□□ -0.41
CDC42BPA-202ENST00000366764 GOLGA8JA6NMD2 632 aa12.47□□□□□ -0.41
CDC42BPA-202ENST00000366764 S100BP04271 92 aaPredicted RBP12.47□□□□□ -0.41
CDC42BPA-202ENST00000366764 MTERF2Q49AM1 385 aa12.47□□□□□ -0.41
CDC42BPA-202ENST00000366764 FAM149B1Q96BN6 582 aa12.47□□□□□ -0.41
CDC42BPA-202ENST00000366764 BTBD6Q96KE9 485 aa12.47□□□□□ -0.41
CDC42BPA-202ENST00000366764 OLFML3Q9NRN5 406 aa12.47□□□□□ -0.41
CDC42BPA-202ENST00000366764 DNAJC17Q9NVM6 304 aaKnown RBP12.47□□□□□ -0.41
CDC42BPA-202ENST00000366764 RBAKQ9NYW8 714 aaPredicted RBP12.47□□□□□ -0.41
CDC42BPA-202ENST00000366764 MYCNP04198 464 aaPredicted RBP12.47□□□□□ -0.41
CDC42BPA-202ENST00000366764 PDHA1P08559 390 aa12.47□□□□□ -0.41
CDC42BPA-202ENST00000366764 PON1P27169 355 aa12.47□□□□□ -0.41
CDC42BPA-202ENST00000366764 CMTM5Q96DZ9 223 aa12.47□□□□□ -0.41
CDC42BPA-202ENST00000366764 TRIM62Q9BVG3 475 aa12.47□□□□□ -0.41
CDC42BPA-202ENST00000366764 SPC25Q9HBM1 224 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms