RNA–Protein interactions for RNA: ENST00000366216.6

CSNK1E-202, Transcript of casein kinase 1 epsilon, humanhuman

TSL 2

Gene CSNK1E, Length 1,005 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-202ENST00000366216 SMC1AQ14683 1233 aaKnown RBP12.33□□□□□ -0.44
CSNK1E-202ENST00000366216 ARSHQ5FYA8 562 aa12.33□□□□□ -0.44
CSNK1E-202ENST00000366216 RARS2Q5T160 578 aaKnown RBP12.33□□□□□ -0.44
CSNK1E-202ENST00000366216 ZNF746Q6NUN9 644 aaPredicted RBP12.33□□□□□ -0.44
CSNK1E-202ENST00000366216 TMC7Q7Z402 723 aa12.33□□□□□ -0.44
CSNK1E-202ENST00000366216 TPH2Q8IWU9 490 aa12.33□□□□□ -0.44
CSNK1E-202ENST00000366216 GUF1Q8N442 669 aaKnown RBP12.33□□□□□ -0.44
CSNK1E-202ENST00000366216 DCLK2Q8N568 766 aa12.33□□□□□ -0.44
CSNK1E-202ENST00000366216 KIAA0895Q8NCT3 520 aa12.33□□□□□ -0.44
CSNK1E-202ENST00000366216 NOC3LQ8WTT2 800 aaKnown RBP12.33□□□□□ -0.44
CSNK1E-202ENST00000366216 CELF4Q9BZC1 486 aaKnown RBP12.33□□□□□ -0.44
CSNK1E-202ENST00000366216 XPO4Q9C0E2 1151 aaKnown RBP12.33□□□□□ -0.44
CSNK1E-202ENST00000366216 ZSWIM4Q9H7M6 989 aa12.33□□□□□ -0.44
CSNK1E-202ENST00000366216 C1orf112Q9NSG2 853 aa12.33□□□□□ -0.44
CSNK1E-202ENST00000366216 SAMSN1Q9NSI8 373 aaKnown RBP12.33□□□□□ -0.44
CSNK1E-202ENST00000366216 KCND2Q9NZV8 630 aa12.33□□□□□ -0.44
CSNK1E-202ENST00000366216 IFNKQ9P0W0 207 aa12.33□□□□□ -0.44
CSNK1E-202ENST00000366216 TCEAL9Q9UHQ7 104 aa12.33□□□□□ -0.44
CSNK1E-202ENST00000366216 DUSP12Q9UNI6 340 aa12.33□□□□□ -0.44
CSNK1E-202ENST00000366216 ANKRD11Q6UB99 2663 aaPredicted RBP12.33□□□□□ -0.44
CSNK1E-202ENST00000366216 DENND3A2RUS2 1198 aa12.32□□□□□ -0.44
CSNK1E-202ENST00000366216 C2orf71A6NGG8 1288 aa12.32□□□□□ -0.44
CSNK1E-202ENST00000366216 RRN3P2A6NIE6 340 aa12.32□□□□□ -0.44
CSNK1E-202ENST00000366216 WDR64B1ANS9 1081 aa12.32□□□□□ -0.44
CSNK1E-202ENST00000366216 C9IYK1 514 aa12.32□□□□□ -0.44
CSNK1E-202ENST00000366216 DDX39AO00148 427 aaKnown RBP12.32□□□□□ -0.44
CSNK1E-202ENST00000366216 SERPINC1P01008 464 aa12.32□□□□□ -0.44
CSNK1E-202ENST00000366216 FGFR1P11362 822 aa12.32□□□□□ -0.44
CSNK1E-202ENST00000366216 IDEP14735 1019 aa12.32□□□□□ -0.44
CSNK1E-202ENST00000366216 CDK11BP21127 795 aaKnown RBP12.32□□□□□ -0.44
CSNK1E-202ENST00000366216 QARSP47897 775 aaKnown RBP12.32□□□□□ -0.44
CSNK1E-202ENST00000366216 KRT17Q04695 432 aa12.32□□□□□ -0.44
CSNK1E-202ENST00000366216 NFX1Q12986 1120 aaKnown RBP12.32□□□□□ -0.44
CSNK1E-202ENST00000366216 GIT2Q14161 759 aa12.32□□□□□ -0.44
CSNK1E-202ENST00000366216 TPD52L1Q16890 204 aaPredicted RBP12.32□□□□□ -0.44
CSNK1E-202ENST00000366216 ATAT1Q5SQI0 421 aa12.32□□□□□ -0.44
CSNK1E-202ENST00000366216 CENPPQ6IPU0 288 aa12.32□□□□□ -0.44
CSNK1E-202ENST00000366216 TTI2Q6NXR4 508 aa12.32□□□□□ -0.44
CSNK1E-202ENST00000366216 FAM43BQ6ZT52 329 aaPredicted RBP12.32□□□□□ -0.44
CSNK1E-202ENST00000366216 SLC24A5Q71RS6 500 aa12.32□□□□□ -0.44
CSNK1E-202ENST00000366216 DRC7Q8IY82 874 aa12.32□□□□□ -0.44
CSNK1E-202ENST00000366216 SMAP1Q8IYB5 467 aaPredicted RBP12.32□□□□□ -0.44
CSNK1E-202ENST00000366216 C12orf76Q8N812 135 aaPredicted RBP12.32□□□□□ -0.44
CSNK1E-202ENST00000366216 MRPL43Q8N983 215 aaKnown RBP12.32□□□□□ -0.44
CSNK1E-202ENST00000366216 RIN2Q8WYP3 895 aaPredicted RBP12.32□□□□□ -0.44
CSNK1E-202ENST00000366216 GLG1Q92896 1179 aa12.32□□□□□ -0.44
CSNK1E-202ENST00000366216 LXNQ9BS40 222 aa12.32□□□□□ -0.44
CSNK1E-202ENST00000366216 BHMT2Q9H2M3 363 aa12.32□□□□□ -0.44
CSNK1E-202ENST00000366216 IMPACTQ9P2X3 320 aa12.32□□□□□ -0.44
CSNK1E-202ENST00000366216 NOC2LQ9Y3T9 749 aaKnown RBP12.32□□□□□ -0.44
CSNK1E-202ENST00000366216 LRRC10BA6NIK2 292 aa12.31□□□□□ -0.44
CSNK1E-202ENST00000366216 CLASP2O75122 1294 aaKnown RBP12.31□□□□□ -0.44
CSNK1E-202ENST00000366216 KIF20AO95235 890 aa12.31□□□□□ -0.44
CSNK1E-202ENST00000366216 KRT18P05783 430 aaKnown RBP12.31□□□□□ -0.44
CSNK1E-202ENST00000366216 PYGBP11216 843 aa12.31□□□□□ -0.44
CSNK1E-202ENST00000366216 SDHBP21912 280 aa12.31□□□□□ -0.44
CSNK1E-202ENST00000366216 PPM1AP35813 382 aa12.31□□□□□ -0.44
CSNK1E-202ENST00000366216 FAM26FQ5R3K3 315 aa12.31□□□□□ -0.44
CSNK1E-202ENST00000366216 RINT1Q6NUQ1 792 aa12.31□□□□□ -0.44
CSNK1E-202ENST00000366216 KCNT2Q6UVM3 1135 aa12.31□□□□□ -0.44
CSNK1E-202ENST00000366216 C1orf186Q6ZWK4 172 aa12.31□□□□□ -0.44
CSNK1E-202ENST00000366216 ZSCAN30Q86W11 494 aa12.31□□□□□ -0.44
CSNK1E-202ENST00000366216 C4orf19Q8IY42 314 aa12.31□□□□□ -0.44
CSNK1E-202ENST00000366216 SPC24Q8NBT2 197 aa12.31□□□□□ -0.44
CSNK1E-202ENST00000366216 SEPT1Q8WYJ6 367 aa12.31□□□□□ -0.44
CSNK1E-202ENST00000366216 ACSF2Q96CM8 615 aaPredicted RBP12.31□□□□□ -0.44
CSNK1E-202ENST00000366216 ADAM2Q99965 735 aa12.31□□□□□ -0.44
CSNK1E-202ENST00000366216 SMARCAD1Q9H4L7 1026 aa12.31□□□□□ -0.44
CSNK1E-202ENST00000366216 THAP9Q9H5L6 903 aa12.31□□□□□ -0.44
CSNK1E-202ENST00000366216 SLC39A2Q9NP94 309 aa12.31□□□□□ -0.44
CSNK1E-202ENST00000366216 RGS18Q9NS28 235 aa12.31□□□□□ -0.44
CSNK1E-202ENST00000366216 DZANK1Q9NVP4 752 aa12.31□□□□□ -0.44
CSNK1E-202ENST00000366216 PKD2L1Q9P0L9 805 aa12.31□□□□□ -0.44
CSNK1E-202ENST00000366216 LIMA1Q9UHB6 759 aaKnown RBP12.31□□□□□ -0.44
CSNK1E-202ENST00000366216 MAPK8IP1Q9UQF2 711 aa12.31□□□□□ -0.44
CSNK1E-202ENST00000366216 PCDHA2Q9Y5H9 948 aa12.31□□□□□ -0.44
CSNK1E-202ENST00000366216 A0A1B0GTH6 734 aa12.3□□□□□ -0.44
CSNK1E-202ENST00000366216 DKC1O60832 514 aaKnown RBP eCLIP12.3□□□□□ -0.44
CSNK1E-202ENST00000366216 CCNE2O96020 404 aa12.3□□□□□ -0.44
CSNK1E-202ENST00000366216 SP9P0CG40 484 aa12.3□□□□□ -0.44
CSNK1E-202ENST00000366216 GAP43P17677 238 aa12.3□□□□□ -0.44
CSNK1E-202ENST00000366216 GUCY2CP25092 1073 aa12.3□□□□□ -0.44
CSNK1E-202ENST00000366216 PMS1P54277 932 aaKnown RBP12.3□□□□□ -0.44
CSNK1E-202ENST00000366216 PSMC5P62195 406 aa12.3□□□□□ -0.44
CSNK1E-202ENST00000366216 PLCB4Q15147 1175 aa12.3□□□□□ -0.44
CSNK1E-202ENST00000366216 APTXQ7Z2E3 356 aaKnown RBP12.3□□□□□ -0.44
CSNK1E-202ENST00000366216 ANKRD20A12PQ8NF67 263 aa12.3□□□□□ -0.44
CSNK1E-202ENST00000366216 PIGOQ8TEQ8 1089 aa12.3□□□□□ -0.44
CSNK1E-202ENST00000366216 ZNF558Q96NG5 402 aa12.3□□□□□ -0.44
CSNK1E-202ENST00000366216 REEP2Q9BRK0 252 aa12.3□□□□□ -0.44
CSNK1E-202ENST00000366216 RUSC1Q9BVN2 902 aa12.3□□□□□ -0.44
CSNK1E-202ENST00000366216 KCNK12Q9HB15 430 aa12.3□□□□□ -0.44
CSNK1E-202ENST00000366216 RYDENQ9NUL5 291 aaKnown RBP12.3□□□□□ -0.44
CSNK1E-202ENST00000366216 TMEM161AQ9NX61 479 aa12.3□□□□□ -0.44
CSNK1E-202ENST00000366216 SPG21Q9NZD8 308 aa12.3□□□□□ -0.44
CSNK1E-202ENST00000366216 WRAP73Q9P2S5 460 aaPredicted RBP12.3□□□□□ -0.44
CSNK1E-202ENST00000366216 ODF2LQ9ULJ1 636 aa12.3□□□□□ -0.44
CSNK1E-202ENST00000366216 ZKSCAN5Q9Y2L8 839 aa12.3□□□□□ -0.44
CSNK1E-202ENST00000366216 SAMM50Q9Y512 469 aa12.3□□□□□ -0.44
CSNK1E-202ENST00000366216 PCDHA10Q9Y5I2 948 aa12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms