RNA–Protein interactions for RNA: ENST00000361309.5

CD47-202, Transcript of CD47 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD47, Length 1,285 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD47-202ENST00000361309 RECQL4O94761 1208 aa23.33■■□□□ 1.33
CD47-202ENST00000361309 LARGE1O95461 756 aa23.33■■□□□ 1.33
CD47-202ENST00000361309 C8AP07357 584 aa23.33■■□□□ 1.33
CD47-202ENST00000361309 HNRNPA1P09651 372 aaKnown RBP eCLIP23.33■■□□□ 1.33
CD47-202ENST00000361309 GPC5P78333 572 aa23.33■■□□□ 1.33
CD47-202ENST00000361309 TMEM132AQ24JP5 1023 aa23.33■■□□□ 1.33
CD47-202ENST00000361309 CATSPER3Q86XQ3 398 aa23.33■■□□□ 1.33
CD47-202ENST00000361309 PJA1Q8NG27 643 aa23.33■■□□□ 1.33
CD47-202ENST00000361309 TMEM60Q9H2L4 133 aa23.33■■□□□ 1.33
CD47-202ENST00000361309 PATJQ8NI35 1801 aa23.33■■□□□ 1.32
CD47-202ENST00000361309 CCL16O15467 120 aa23.32■■□□□ 1.32
CD47-202ENST00000361309 MED24O75448 989 aa23.32■■□□□ 1.32
CD47-202ENST00000361309 SP9P0CG40 484 aa23.32■■□□□ 1.32
CD47-202ENST00000361309 GLULP15104 373 aa23.32■■□□□ 1.32
CD47-202ENST00000361309 STARD6P59095 220 aa23.32■■□□□ 1.32
CD47-202ENST00000361309 PRPF4BQ13523 1007 aaKnown RBP23.32■■□□□ 1.32
CD47-202ENST00000361309 NAB2Q15742 525 aa23.32■■□□□ 1.32
CD47-202ENST00000361309 ME3Q16798 604 aa23.32■■□□□ 1.32
CD47-202ENST00000361309 NOSTRINQ8IVI9 506 aa23.32■■□□□ 1.32
CD47-202ENST00000361309 C1orf210Q8IVY1 113 aa23.32■■□□□ 1.32
CD47-202ENST00000361309 BSNDQ8WZ55 320 aa23.32■■□□□ 1.32
CD47-202ENST00000361309 TUFT1Q9NNX1 390 aa23.32■■□□□ 1.32
CD47-202ENST00000361309 POLIQ9UNA4 740 aa23.32■■□□□ 1.32
CD47-202ENST00000361309 USP20Q9Y2K6 914 aa23.32■■□□□ 1.32
CD47-202ENST00000361309 HOXA9P31269 272 aa23.31■■□□□ 1.32
CD47-202ENST00000361309 NSUN7Q8NE18 718 aaKnown RBP23.31■■□□□ 1.32
CD47-202ENST00000361309 FGF13Q92913 245 aa23.31■■□□□ 1.32
CD47-202ENST00000361309 GTF3C6Q969F1 213 aa23.31■■□□□ 1.32
CD47-202ENST00000361309 C2orf40Q9H1Z8 148 aa23.31■■□□□ 1.32
CD47-202ENST00000361309 XYLBO75191 536 aa23.3■■□□□ 1.32
CD47-202ENST00000361309 LRRN2O75325 713 aa23.3■■□□□ 1.32
CD47-202ENST00000361309 EDN1P05305 212 aa23.3■■□□□ 1.32
CD47-202ENST00000361309 PRKCBP05771 671 aa23.3■■□□□ 1.32
CD47-202ENST00000361309 LIG1P18858 919 aa23.3■■□□□ 1.32
CD47-202ENST00000361309 ELAVL2Q12926 359 aaKnown RBP23.3■■□□□ 1.32
CD47-202ENST00000361309 SNW1Q13573 536 aaKnown RBP23.3■■□□□ 1.32
CD47-202ENST00000361309 MAPK6Q16659 721 aa23.3■■□□□ 1.32
CD47-202ENST00000361309 PDXDC1Q6P996 788 aa23.3■■□□□ 1.32
CD47-202ENST00000361309 ZC3H14Q6PJT7 736 aaKnown RBP23.3■■□□□ 1.32
CD47-202ENST00000361309 MTSS1LQ765P7 747 aa23.3■■□□□ 1.32
CD47-202ENST00000361309 ITFG1Q8TB96 612 aa23.3■■□□□ 1.32
CD47-202ENST00000361309 SLC7A14Q8TBB6 771 aa23.3■■□□□ 1.32
CD47-202ENST00000361309 SHDQ96IW2 340 aa23.3■■□□□ 1.32
CD47-202ENST00000361309 NACC1Q96RE7 527 aa23.3■■□□□ 1.32
CD47-202ENST00000361309 ADPGKQ9BRR6 497 aa23.3■■□□□ 1.32
CD47-202ENST00000361309 GDAQ9Y2T3 454 aa23.3■■□□□ 1.32
CD47-202ENST00000361309 CEP250Q9BV73 2442 aa23.3■■□□□ 1.32
CD47-202ENST00000361309 ACKR2O00590 384 aa23.29■■□□□ 1.32
CD47-202ENST00000361309 JAK2O60674 1132 aa23.29■■□□□ 1.32
CD47-202ENST00000361309 MCM7P33993 719 aa23.29■■□□□ 1.32
CD47-202ENST00000361309 ANAPC15P60006 121 aa23.29■■□□□ 1.32
CD47-202ENST00000361309 TRIM29Q14134 588 aa23.29■■□□□ 1.32
CD47-202ENST00000361309 AXDND1Q5T1B0 1012 aaPredicted RBP23.29■■□□□ 1.32
CD47-202ENST00000361309 EEF1DP3Q658K8 133 aa23.29■■□□□ 1.32
CD47-202ENST00000361309 KIAA2013Q8IYS2 634 aa23.29■■□□□ 1.32
CD47-202ENST00000361309 POLR3CQ9BUI4 534 aaPredicted RBP23.29■■□□□ 1.32
CD47-202ENST00000361309 CCDC113Q9H0I3 377 aa23.29■■□□□ 1.32
CD47-202ENST00000361309 IGFBP6P24592 240 aaPredicted RBP23.28■■□□□ 1.32
CD47-202ENST00000361309 OR1D2P34982 312 aa23.28■■□□□ 1.32
CD47-202ENST00000361309 RAB33AQ14088 237 aa23.28■■□□□ 1.32
CD47-202ENST00000361309 PADI6Q6TGC4 694 aa23.28■■□□□ 1.32
CD47-202ENST00000361309 PDZRN4Q6ZMN7 1036 aaPredicted RBP23.28■■□□□ 1.32
CD47-202ENST00000361309 DEPTORQ8TB45 409 aa23.28■■□□□ 1.32
CD47-202ENST00000361309 HCFC1R1Q9NWW0 138 aa23.28■■□□□ 1.32
CD47-202ENST00000361309 DNAH14Q0VDD8 3507 aa23.28■■□□□ 1.32
CD47-202ENST00000361309 CITO14578 2027 aa23.27■■□□□ 1.32
CD47-202ENST00000361309 KANSL1LA0AUZ9 987 aa23.27■■□□□ 1.32
CD47-202ENST00000361309 CYP11B2P19099 503 aa23.27■■□□□ 1.32
CD47-202ENST00000361309 NAMPTP43490 491 aa23.27■■□□□ 1.32
CD47-202ENST00000361309 MLF2Q15773 248 aaPredicted RBP23.27■■□□□ 1.32
CD47-202ENST00000361309 UVSSAQ2YD98 709 aa23.27■■□□□ 1.32
CD47-202ENST00000361309 SLC44A4Q53GD3 710 aa23.27■■□□□ 1.32
CD47-202ENST00000361309 MAML2Q8IZL2 1156 aaPredicted RBP23.27■■□□□ 1.32
CD47-202ENST00000361309 RMDN1Q96DB5 314 aa23.27■■□□□ 1.32
CD47-202ENST00000361309 HINFPQ9BQA5 517 aa23.27■■□□□ 1.32
CD47-202ENST00000361309 ARHGEF35A5YM69 484 aa23.26■■□□□ 1.31
CD47-202ENST00000361309 FGFR3P22607 806 aa23.26■■□□□ 1.31
CD47-202ENST00000361309 GLRA4Q5JXX5 417 aa23.26■■□□□ 1.31
CD47-202ENST00000361309 RSPO2Q6UXX9 243 aaPredicted RBP23.26■■□□□ 1.31
CD47-202ENST00000361309 KXD1Q9BQD3 176 aa23.26■■□□□ 1.31
CD47-202ENST00000361309 DDX23Q9BUQ8 820 aaKnown RBP23.26■■□□□ 1.31
CD47-202ENST00000361309 KIFC3Q9BVG8 833 aa23.26■■□□□ 1.31
CD47-202ENST00000361309 POLD4Q9HCU8 107 aa23.26■■□□□ 1.31
CD47-202ENST00000361309 DNMT3BQ9UBC3 853 aaKnown RBP23.26■■□□□ 1.31
CD47-202ENST00000361309 MTRRQ9UBK8 725 aa23.26■■□□□ 1.31
CD47-202ENST00000361309 MTF2Q9Y483 593 aaPredicted RBP23.26■■□□□ 1.31
CD47-202ENST00000361309 TMEM189-UBE2V1I3L0A0 370 aa23.25■■□□□ 1.31
CD47-202ENST00000361309 B3GAT3O94766 335 aa23.25■■□□□ 1.31
CD47-202ENST00000361309 POU2F2P09086 479 aa23.25■■□□□ 1.31
CD47-202ENST00000361309 RPA1P27694 616 aa23.25■■□□□ 1.31
CD47-202ENST00000361309 CLCNKBP51801 687 aa23.25■■□□□ 1.31
CD47-202ENST00000361309 PRKCQQ04759 706 aa23.25■■□□□ 1.31
CD47-202ENST00000361309 UBXN2BQ14CS0 331 aa23.25■■□□□ 1.31
CD47-202ENST00000361309 PPP2R5AQ15172 486 aa23.25■■□□□ 1.31
CD47-202ENST00000361309 DCAF4L1Q3SXM0 396 aa23.25■■□□□ 1.31
CD47-202ENST00000361309 PABPC1LQ4VXU2 614 aaKnown RBP23.25■■□□□ 1.31
CD47-202ENST00000361309 NPAS3Q8IXF0 933 aa23.25■■□□□ 1.31
CD47-202ENST00000361309 ERMNQ8TAM6 284 aa23.25■■□□□ 1.31
CD47-202ENST00000361309 ING5Q8WYH8 240 aa23.25■■□□□ 1.31
CD47-202ENST00000361309 PPP1R10Q96QC0 940 aaKnown RBP23.25■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms