RNA–Protein interactions for RNA: ENST00000360280.7

VPS13A-203, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene VPS13A, Length 15,320 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-203ENST00000360280 SNPHO15079 494 aa9.77□□□□□ -0.84
VPS13A-203ENST00000360280 UBE3CQ15386 1083 aa9.77□□□□□ -0.84
VPS13A-203ENST00000360280 FKBP9O95302 570 aa9.77□□□□□ -0.84
VPS13A-203ENST00000360280 FKBP9P1Q75LS8 142 aa9.77□□□□□ -0.84
VPS13A-203ENST00000360280 LRRC8DQ7L1W4 858 aa9.77□□□□□ -0.84
VPS13A-203ENST00000360280 MCPH1Q8NEM0 835 aa9.77□□□□□ -0.84
VPS13A-203ENST00000360280 AFG1LQ8WV93 481 aa9.77□□□□□ -0.84
VPS13A-203ENST00000360280 PRRG3Q9BZD7 231 aa9.77□□□□□ -0.84
VPS13A-203ENST00000360280 PLOD1Q02809 727 aaPredicted RBP9.77□□□□□ -0.85
VPS13A-203ENST00000360280 TRIM25Q14258 630 aaKnown RBP9.77□□□□□ -0.85
VPS13A-203ENST00000360280 KCTD1Q719H9 257 aa9.77□□□□□ -0.85
VPS13A-203ENST00000360280 ZBTB38Q8NAP3 1195 aaPredicted RBP9.77□□□□□ -0.85
VPS13A-203ENST00000360280 TRABDQ9H4I3 376 aa9.77□□□□□ -0.85
VPS13A-203ENST00000360280 BCAR1P56945 870 aa9.77□□□□□ -0.85
VPS13A-203ENST00000360280 KBTBD12Q3ZCT8 623 aa9.77□□□□□ -0.85
VPS13A-203ENST00000360280 ANKRD49Q8WVL7 239 aa9.77□□□□□ -0.85
VPS13A-203ENST00000360280 AFF4Q9UHB7 1163 aaKnown RBP9.77□□□□□ -0.85
VPS13A-203ENST00000360280 PDCD10Q9BUL8 212 aa9.77□□□□□ -0.85
VPS13A-203ENST00000360280 STK32BQ9NY57 414 aa9.77□□□□□ -0.85
VPS13A-203ENST00000360280 COPB2P35606 906 aa9.77□□□□□ -0.85
VPS13A-203ENST00000360280 PTH1RQ03431 593 aa9.77□□□□□ -0.85
VPS13A-203ENST00000360280 ZCWPW2Q504Y3 356 aa9.77□□□□□ -0.85
VPS13A-203ENST00000360280 PDXDC2PQ6P474 469 aa9.77□□□□□ -0.85
VPS13A-203ENST00000360280 DSTYKQ6XUX3 929 aa9.77□□□□□ -0.85
VPS13A-203ENST00000360280 UNC13DQ70J99 1090 aa9.77□□□□□ -0.85
VPS13A-203ENST00000360280 G2E3Q7L622 706 aa9.77□□□□□ -0.85
VPS13A-203ENST00000360280 PPP1R36Q96LQ0 422 aa9.77□□□□□ -0.85
VPS13A-203ENST00000360280 ANKRD27Q96NW4 1050 aa9.77□□□□□ -0.85
VPS13A-203ENST00000360280 CCT8L2Q96SF2 557 aa9.77□□□□□ -0.85
VPS13A-203ENST00000360280 FBXL5Q9UKA1 691 aa9.77□□□□□ -0.85
VPS13A-203ENST00000360280 GRIN2AQ12879 1464 aa9.77□□□□□ -0.85
VPS13A-203ENST00000360280 MAGEA13PA6NCF6 341 aa9.77□□□□□ -0.85
VPS13A-203ENST00000360280 ASNA1O43681 348 aa9.77□□□□□ -0.85
VPS13A-203ENST00000360280 EYA1Q99502 592 aa9.77□□□□□ -0.85
VPS13A-203ENST00000360280 TSC22D2O75157 780 aa9.77□□□□□ -0.85
VPS13A-203ENST00000360280 KRT76Q01546 638 aa9.77□□□□□ -0.85
VPS13A-203ENST00000360280 NCAPHQ15003 741 aa9.77□□□□□ -0.85
VPS13A-203ENST00000360280 E4F1Q66K89 784 aaPredicted RBP9.77□□□□□ -0.85
VPS13A-203ENST00000360280 HEMGNQ9BXL5 484 aa9.77□□□□□ -0.85
VPS13A-203ENST00000360280 DTNAQ9Y4J8 743 aa9.77□□□□□ -0.85
VPS13A-203ENST00000360280 SMIM31A0A1B0GVY4 71 aa9.77□□□□□ -0.85
VPS13A-203ENST00000360280 APOL1O14791 398 aa9.77□□□□□ -0.85
VPS13A-203ENST00000360280 PSMC3P17980 439 aa9.77□□□□□ -0.85
VPS13A-203ENST00000360280 ITGAXP20702 1163 aa9.77□□□□□ -0.85
VPS13A-203ENST00000360280 ZNF235Q14590 738 aa9.77□□□□□ -0.85
VPS13A-203ENST00000360280 ATAD3BQ5T9A4 648 aa9.77□□□□□ -0.85
VPS13A-203ENST00000360280 FBXW10Q5XX13 1052 aa9.77□□□□□ -0.85
VPS13A-203ENST00000360280 CCDC60Q8IWA6 550 aaPredicted RBP9.77□□□□□ -0.85
VPS13A-203ENST00000360280 SULF1Q8IWU6 871 aa9.77□□□□□ -0.85
VPS13A-203ENST00000360280 LINC00301Q8NCQ3 95 aa9.77□□□□□ -0.85
VPS13A-203ENST00000360280 ABCC4O15439 1325 aa9.77□□□□□ -0.85
VPS13A-203ENST00000360280 SPAG6O75602 509 aa9.77□□□□□ -0.85
VPS13A-203ENST00000360280 IL6P05231 212 aa9.77□□□□□ -0.85
VPS13A-203ENST00000360280 GNAT1P11488 350 aa9.77□□□□□ -0.85
VPS13A-203ENST00000360280 HOXC9P31274 260 aa9.77□□□□□ -0.85
VPS13A-203ENST00000360280 COX10Q12887 443 aa9.77□□□□□ -0.85
VPS13A-203ENST00000360280 ORC2Q13416 577 aaPredicted RBP9.77□□□□□ -0.85
VPS13A-203ENST00000360280 IZUMO3Q5VZ72 239 aa9.77□□□□□ -0.85
VPS13A-203ENST00000360280 CC2D2BQ6DHV5 1058 aa9.77□□□□□ -0.85
VPS13A-203ENST00000360280 LRIG3Q6UXM1 1119 aa9.77□□□□□ -0.85
VPS13A-203ENST00000360280 KRT78Q8N1N4 520 aa9.77□□□□□ -0.85
VPS13A-203ENST00000360280 SPATA2Q9UM82 520 aa9.77□□□□□ -0.85
VPS13A-203ENST00000360280 EVPLLA8MZ36 301 aa9.77□□□□□ -0.85
VPS13A-203ENST00000360280 XPO1O14980 1071 aaKnown RBP9.77□□□□□ -0.85
VPS13A-203ENST00000360280 MLNP12872 115 aa9.77□□□□□ -0.85
VPS13A-203ENST00000360280 PHKA2P46019 1235 aa9.77□□□□□ -0.85
VPS13A-203ENST00000360280 CCDC81Q6ZN84 652 aa9.77□□□□□ -0.85
VPS13A-203ENST00000360280 GRAMD1CQ8IYS0 662 aa9.77□□□□□ -0.85
VPS13A-203ENST00000360280 DCUN1D1Q96GG9 259 aa9.77□□□□□ -0.85
VPS13A-203ENST00000360280 TSPOAP1O95153 1857 aa9.77□□□□□ -0.85
VPS13A-203ENST00000360280 YEATS2Q9ULM3 1422 aa9.77□□□□□ -0.85
VPS13A-203ENST00000360280 DFFAO00273 331 aa9.76□□□□□ -0.85
VPS13A-203ENST00000360280 MRPS25P82663 173 aaKnown RBP9.76□□□□□ -0.85
VPS13A-203ENST00000360280 PKP1Q13835 747 aa9.76□□□□□ -0.85
VPS13A-203ENST00000360280 CABLES1Q8TDN4 633 aa9.76□□□□□ -0.85
VPS13A-203ENST00000360280 EPC1Q9H2F5 836 aa9.76□□□□□ -0.85
VPS13A-203ENST00000360280 PSMD3O43242 534 aa9.76□□□□□ -0.85
VPS13A-203ENST00000360280 CYP2C19P33261 490 aa9.76□□□□□ -0.85
VPS13A-203ENST00000360280 EAPPQ56P03 285 aaPredicted RBP9.76□□□□□ -0.85
VPS13A-203ENST00000360280 PAGE5Q96GU1 130 aa9.76□□□□□ -0.85
VPS13A-203ENST00000360280 FOXP3Q9BZS1 431 aa9.76□□□□□ -0.85
VPS13A-203ENST00000360280 TAS2R42Q7RTR8 314 aa9.76□□□□□ -0.85
VPS13A-203ENST00000360280 DLGAP2Q9P1A6 1054 aa9.76□□□□□ -0.85
VPS13A-203ENST00000360280 USP1O94782 785 aa9.76□□□□□ -0.85
VPS13A-203ENST00000360280 GCP02774 474 aa9.76□□□□□ -0.85
VPS13A-203ENST00000360280 UBTFL6P0CB48 400 aaPredicted RBP9.76□□□□□ -0.85
VPS13A-203ENST00000360280 TTC39BQ5VTQ0 682 aaPredicted RBP9.76□□□□□ -0.85
VPS13A-203ENST00000360280 PRPF39Q86UA1 669 aaKnown RBP9.76□□□□□ -0.85
VPS13A-203ENST00000360280 SSH3Q8TE77 659 aa9.76□□□□□ -0.85
VPS13A-203ENST00000360280 LGALS16A8MUM7 142 aa9.76□□□□□ -0.85
VPS13A-203ENST00000360280 SERPINB9P50453 376 aa9.76□□□□□ -0.85
VPS13A-203ENST00000360280 GTF2IP78347 998 aa9.76□□□□□ -0.85
VPS13A-203ENST00000360280 SPATA16Q9BXB7 569 aa9.76□□□□□ -0.85
VPS13A-203ENST00000360280 OSBPL8Q9BZF1 889 aa9.76□□□□□ -0.85
VPS13A-203ENST00000360280 SRGAP2O75044 1071 aa9.76□□□□□ -0.85
VPS13A-203ENST00000360280 HSD17B4P51659 736 aa9.76□□□□□ -0.85
VPS13A-203ENST00000360280 GFPT1Q06210 699 aaPredicted RBP9.76□□□□□ -0.85
VPS13A-203ENST00000360280 XXYLT1Q8NBI6 393 aa9.76□□□□□ -0.85
VPS13A-203ENST00000360280 DCPSQ96C86 337 aaKnown RBP9.76□□□□□ -0.85
VPS13A-203ENST00000360280 PGBD4Q96DM1 585 aa9.76□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms