RNA–Protein interactions for RNA: ENST00000359785.9

PTPN22-201, Transcript of protein tyrosine phosphatase, non-receptor type 22, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PTPN22, Length 3,654 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN22-201ENST00000359785 CDC42EP4Q9H3Q1 356 aaKnown RBP4.83□□□□□ -1.64
PTPN22-201ENST00000359785 KANSL3Q9P2N6 904 aa4.83□□□□□ -1.64
PTPN22-201ENST00000359785 TUBGCP4Q9UGJ1 667 aa4.83□□□□□ -1.64
PTPN22-201ENST00000359785 DMTF1Q9Y222 760 aa4.83□□□□□ -1.64
PTPN22-201ENST00000359785 CNTNAP1P78357 1384 aa4.83□□□□□ -1.64
PTPN22-201ENST00000359785 DDX3XO00571 662 aaKnown RBP eCLIP4.83□□□□□ -1.64
PTPN22-201ENST00000359785 CDH16O75309 829 aa4.83□□□□□ -1.64
PTPN22-201ENST00000359785 TTC4O95801 387 aa4.83□□□□□ -1.64
PTPN22-201ENST00000359785 CYP3A4P08684 503 aa4.83□□□□□ -1.64
PTPN22-201ENST00000359785 MARK3P27448 753 aa4.83□□□□□ -1.64
PTPN22-201ENST00000359785 SLC1A1P43005 524 aa4.83□□□□□ -1.64
PTPN22-201ENST00000359785 ZAP70P43403 619 aa4.83□□□□□ -1.64
PTPN22-201ENST00000359785 KCNJ2P63252 427 aa4.83□□□□□ -1.64
PTPN22-201ENST00000359785 AIMP1Q12904 312 aaKnown RBP4.83□□□□□ -1.64
PTPN22-201ENST00000359785 MYO1EQ12965 1108 aa4.83□□□□□ -1.64
PTPN22-201ENST00000359785 SEPT6Q14141 434 aa4.83□□□□□ -1.64
PTPN22-201ENST00000359785 WDR72Q3MJ13 1102 aa4.83□□□□□ -1.64
PTPN22-201ENST00000359785 LMBR1LQ6UX01 489 aa4.83□□□□□ -1.64
PTPN22-201ENST00000359785 MFSD6Q6ZSS7 791 aa4.83□□□□□ -1.64
PTPN22-201ENST00000359785 PDILTQ8N807 584 aa4.83□□□□□ -1.64
PTPN22-201ENST00000359785 NIPA2Q8N8Q9 360 aa4.83□□□□□ -1.64
PTPN22-201ENST00000359785 ZNF420Q8TAQ5 688 aaPredicted RBP4.83□□□□□ -1.64
PTPN22-201ENST00000359785 CERKQ8TCT0 537 aa4.83□□□□□ -1.64
PTPN22-201ENST00000359785 NRG4Q8WWG1 115 aa4.83□□□□□ -1.64
PTPN22-201ENST00000359785 LENG1Q96BZ8 264 aaPredicted RBP4.83□□□□□ -1.64
PTPN22-201ENST00000359785 VPS50Q96JG6 964 aa4.83□□□□□ -1.64
PTPN22-201ENST00000359785 UBXN10Q96LJ8 280 aa4.83□□□□□ -1.64
PTPN22-201ENST00000359785 ZSWIM1Q9BR11 485 aa4.83□□□□□ -1.64
PTPN22-201ENST00000359785 FRMD8Q9BZ67 464 aaPredicted RBP4.83□□□□□ -1.64
PTPN22-201ENST00000359785 NACAP1Q9BZK3 213 aa4.83□□□□□ -1.64
PTPN22-201ENST00000359785 FAM96AQ9H5X1 160 aa4.83□□□□□ -1.64
PTPN22-201ENST00000359785 GPHNQ9NQX3 736 aaPredicted RBP4.83□□□□□ -1.64
PTPN22-201ENST00000359785 MRGBPQ9NV56 204 aa4.83□□□□□ -1.64
PTPN22-201ENST00000359785 SCHIP1Q9P0W5 487 aaPredicted RBP4.83□□□□□ -1.64
PTPN22-201ENST00000359785 TELO2Q9Y4R8 837 aa4.83□□□□□ -1.64
PTPN22-201ENST00000359785 SNNO75324 88 aaPredicted RBP4.82□□□□□ -1.64
PTPN22-201ENST00000359785 DNAJB5O75953 348 aa4.82□□□□□ -1.64
PTPN22-201ENST00000359785 PARNO95453 639 aaKnown RBP4.82□□□□□ -1.64
PTPN22-201ENST00000359785 CYP1A1P04798 512 aaPredicted RBP4.82□□□□□ -1.64
PTPN22-201ENST00000359785 MYBL1P10243 752 aa4.82□□□□□ -1.64
PTPN22-201ENST00000359785 VDRP11473 427 aa4.82□□□□□ -1.64
PTPN22-201ENST00000359785 CDC25AP30304 524 aa4.82□□□□□ -1.64
PTPN22-201ENST00000359785 CCT8P50990 548 aa4.82□□□□□ -1.64
PTPN22-201ENST00000359785 SLC12A3P55017 1021 aa4.82□□□□□ -1.64
PTPN22-201ENST00000359785 GSTM4Q03013 218 aa4.82□□□□□ -1.64
PTPN22-201ENST00000359785 SPIRE1Q08AE8 756 aa4.82□□□□□ -1.64
PTPN22-201ENST00000359785 FAXCQ5TGI0 409 aa4.82□□□□□ -1.64
PTPN22-201ENST00000359785 NEPROQ6NW34 567 aa4.82□□□□□ -1.64
PTPN22-201ENST00000359785 FKBP9P1Q75LS8 142 aa4.82□□□□□ -1.64
PTPN22-201ENST00000359785 ZNF677Q86XU0 584 aa4.82□□□□□ -1.64
PTPN22-201ENST00000359785 KLHDC8BQ8IXV7 354 aa4.82□□□□□ -1.64
PTPN22-201ENST00000359785 GSPT2Q8IYD1 628 aaKnown RBP4.82□□□□□ -1.64
PTPN22-201ENST00000359785 NAT14Q8WUY8 206 aa4.82□□□□□ -1.64
PTPN22-201ENST00000359785 TTC9Q92623 222 aa4.82□□□□□ -1.64
PTPN22-201ENST00000359785 RTP4Q96DX8 246 aa4.82□□□□□ -1.64
PTPN22-201ENST00000359785 ZNF496Q96IT1 587 aaPredicted RBP4.82□□□□□ -1.64
PTPN22-201ENST00000359785 CENPKQ9BS16 269 aa4.82□□□□□ -1.64
PTPN22-201ENST00000359785 BTBD10Q9BSF8 475 aa4.82□□□□□ -1.64
PTPN22-201ENST00000359785 NOC4LQ9BVI4 516 aaKnown RBP4.82□□□□□ -1.64
PTPN22-201ENST00000359785 KLC2Q9H0B6 622 aa4.82□□□□□ -1.64
PTPN22-201ENST00000359785 TOMM22Q9NS69 142 aa4.82□□□□□ -1.64
PTPN22-201ENST00000359785 DNAAF2Q9NVR5 837 aaKnown RBP4.82□□□□□ -1.64
PTPN22-201ENST00000359785 SARDHQ9UL12 918 aa4.82□□□□□ -1.64
PTPN22-201ENST00000359785 GDAQ9Y2T3 454 aa4.82□□□□□ -1.64
PTPN22-201ENST00000359785 PCDHB2Q9Y5E7 798 aa4.82□□□□□ -1.64
PTPN22-201ENST00000359785 GTF3C5Q9Y5Q8 519 aaPredicted RBP4.82□□□□□ -1.64
PTPN22-201ENST00000359785 DUSP10Q9Y6W6 482 aa4.82□□□□□ -1.64
PTPN22-201ENST00000359785 COL4A2P08572 1712 aa4.82□□□□□ -1.64
PTPN22-201ENST00000359785 PASKQ96RG2 1323 aa4.82□□□□□ -1.64
PTPN22-201ENST00000359785 NVLO15381 856 aaKnown RBP4.82□□□□□ -1.64
PTPN22-201ENST00000359785 CBFA2T3O75081 653 aa4.82□□□□□ -1.64
PTPN22-201ENST00000359785 ZC3H11AO75152 810 aaKnown RBP eCLIP4.82□□□□□ -1.64
PTPN22-201ENST00000359785 TXNL4AP83876 142 aaKnown RBP4.82□□□□□ -1.64
PTPN22-201ENST00000359785 PPP3CAQ08209 521 aa4.82□□□□□ -1.64
PTPN22-201ENST00000359785 GRSF1Q12849 480 aaKnown RBP eCLIP4.82□□□□□ -1.64
PTPN22-201ENST00000359785 HERC3Q15034 1050 aa4.82□□□□□ -1.64
PTPN22-201ENST00000359785 FOXD4L6Q3SYB3 417 aaPredicted RBP4.82□□□□□ -1.64
PTPN22-201ENST00000359785 ZNF484Q5JVG2 852 aa4.82□□□□□ -1.64
PTPN22-201ENST00000359785 SLX4IPQ5VYV7 408 aa4.82□□□□□ -1.64
PTPN22-201ENST00000359785 FOXD4L3Q6VB84 417 aaPredicted RBP4.82□□□□□ -1.64
PTPN22-201ENST00000359785 BICDL1Q6ZP65 573 aa4.82□□□□□ -1.64
PTPN22-201ENST00000359785 RIC3Q7Z5B4 369 aa4.82□□□□□ -1.64
PTPN22-201ENST00000359785 C14orf37Q86TY3 774 aa4.82□□□□□ -1.64
PTPN22-201ENST00000359785 PALB2Q86YC2 1186 aa4.82□□□□□ -1.64
PTPN22-201ENST00000359785 LZTR1Q8N653 840 aa4.82□□□□□ -1.64
PTPN22-201ENST00000359785 PRELID2Q8N945 189 aa4.82□□□□□ -1.64
PTPN22-201ENST00000359785 ZFP28Q8NHY6 868 aa4.82□□□□□ -1.64
PTPN22-201ENST00000359785 WDR66Q8TBY9 1149 aa4.82□□□□□ -1.64
PTPN22-201ENST00000359785 GRK7Q8WTQ7 553 aa4.82□□□□□ -1.64
PTPN22-201ENST00000359785 DDI1Q8WTU0 396 aa4.82□□□□□ -1.64
PTPN22-201ENST00000359785 PYROXD1Q8WU10 500 aa4.82□□□□□ -1.64
PTPN22-201ENST00000359785 VCPIP1Q96JH7 1222 aa4.82□□□□□ -1.64
PTPN22-201ENST00000359785 CNDP1Q96KN2 507 aa4.82□□□□□ -1.64
PTPN22-201ENST00000359785 CRAMP1Q96RY5 1269 aa4.82□□□□□ -1.64
PTPN22-201ENST00000359785 SLC26A6Q9BXS9 759 aa4.82□□□□□ -1.64
PTPN22-201ENST00000359785 ZNF385DQ9H6B1 395 aa4.82□□□□□ -1.64
PTPN22-201ENST00000359785 KCNK13Q9HB14 408 aa4.82□□□□□ -1.64
PTPN22-201ENST00000359785 TMEM45AQ9NWC5 275 aa4.82□□□□□ -1.64
PTPN22-201ENST00000359785 SCOCQ9UIL1 159 aa4.82□□□□□ -1.64
PTPN22-201ENST00000359785 ANGPTL2Q9UKU9 493 aa4.82□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms