RNA–Protein interactions for RNA: ENST00000359060.5

SSU72-202, Transcript of SSU72 homolog, RNA polymerase II CTD phosphatase, humanhuman

TSL 2 BASIC

Gene SSU72, Length 4,176 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72-202ENST00000359060 RHPN2Q8IUC4 686 aa11.95□□□□□ -0.5
SSU72-202ENST00000359060 RNF149Q8NC42 400 aa11.95□□□□□ -0.5
SSU72-202ENST00000359060 MLXIPLQ9NP71 852 aa11.95□□□□□ -0.5
SSU72-202ENST00000359060 HOMER3Q9NSC5 361 aa11.95□□□□□ -0.5
SSU72-202ENST00000359060 CDR2Q01850 454 aa11.95□□□□□ -0.5
SSU72-202ENST00000359060 SLMAPQ14BN4 828 aa11.95□□□□□ -0.5
SSU72-202ENST00000359060 MAPK6Q16659 721 aa11.95□□□□□ -0.5
SSU72-202ENST00000359060 TTMPQ5BVD1 217 aa11.95□□□□□ -0.5
SSU72-202ENST00000359060 HP1BP3Q5SSJ5 553 aaPredicted RBP11.95□□□□□ -0.5
SSU72-202ENST00000359060 FAM81BQ96LP2 452 aa11.95□□□□□ -0.5
SSU72-202ENST00000359060 MAK16Q9BXY0 300 aaKnown RBP11.95□□□□□ -0.5
SSU72-202ENST00000359060 UVRAGQ9P2Y5 699 aa11.95□□□□□ -0.5
SSU72-202ENST00000359060 GTF3C4Q9UKN8 822 aa11.95□□□□□ -0.5
SSU72-202ENST00000359060 TTC7AQ9ULT0 858 aaPredicted RBP11.95□□□□□ -0.5
SSU72-202ENST00000359060 CD2APQ9Y5K6 639 aa11.95□□□□□ -0.5
SSU72-202ENST00000359060 NRAPQ86VF7 1730 aa11.95□□□□□ -0.5
SSU72-202ENST00000359060 POC1B-GALNT4F8VUJ3 575 aa11.94□□□□□ -0.5
SSU72-202ENST00000359060 MAFGO15525 162 aa11.94□□□□□ -0.5
SSU72-202ENST00000359060 CCNE2O96020 404 aa11.94□□□□□ -0.5
SSU72-202ENST00000359060 ATP5DP30049 168 aa11.94□□□□□ -0.5
SSU72-202ENST00000359060 KRT17Q04695 432 aa11.94□□□□□ -0.5
SSU72-202ENST00000359060 ZKSCAN8Q15776 578 aaPredicted RBP11.94□□□□□ -0.5
SSU72-202ENST00000359060 MMS22LQ6ZRQ5 1243 aa11.94□□□□□ -0.5
SSU72-202ENST00000359060 NIPA1Q7RTP0 329 aa11.94□□□□□ -0.5
SSU72-202ENST00000359060 NLRP14Q86W24 1093 aa11.94□□□□□ -0.5
SSU72-202ENST00000359060 LRRC71Q8N4P6 559 aa11.94□□□□□ -0.5
SSU72-202ENST00000359060 ATG4AQ8WYN0 398 aa11.94□□□□□ -0.5
SSU72-202ENST00000359060 FBXO40Q9UH90 709 aa11.94□□□□□ -0.5
SSU72-202ENST00000359060 IVNS1ABPQ9Y6Y0 642 aa11.94□□□□□ -0.5
SSU72-202ENST00000359060 C19orf81C9J6K1 198 aa11.94□□□□□ -0.5
SSU72-202ENST00000359060 STAM2O75886 525 aa11.94□□□□□ -0.5
SSU72-202ENST00000359060 ZNF131P52739 623 aa11.94□□□□□ -0.5
SSU72-202ENST00000359060 IRX5P78411 483 aaPredicted RBP11.94□□□□□ -0.5
SSU72-202ENST00000359060 CNTN2Q02246 1040 aa11.94□□□□□ -0.5
SSU72-202ENST00000359060 CYP24A1Q07973 514 aa11.94□□□□□ -0.5
SSU72-202ENST00000359060 MAPK7Q13164 816 aa11.94□□□□□ -0.5
SSU72-202ENST00000359060 ENOSF1Q7L5Y1 443 aa11.94□□□□□ -0.5
SSU72-202ENST00000359060 EPS8L1Q8TE68 723 aa11.94□□□□□ -0.5
SSU72-202ENST00000359060 PSPC1Q8WXF1 523 aaKnown RBP11.94□□□□□ -0.5
SSU72-202ENST00000359060 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP11.94□□□□□ -0.5
SSU72-202ENST00000359060 PCDHB2Q9Y5E7 798 aa11.94□□□□□ -0.5
SSU72-202ENST00000359060 A0A087WUV0 522 aaPredicted RBP11.94□□□□□ -0.5
SSU72-202ENST00000359060 AGPSO00116 658 aa11.94□□□□□ -0.5
SSU72-202ENST00000359060 RRM1P23921 792 aa11.94□□□□□ -0.5
SSU72-202ENST00000359060 ANO5Q75V66 913 aa11.94□□□□□ -0.5
SSU72-202ENST00000359060 VSIG10LQ86VR7 867 aa11.94□□□□□ -0.5
SSU72-202ENST00000359060 SLC13A5Q86YT5 568 aaPredicted RBP11.94□□□□□ -0.5
SSU72-202ENST00000359060 CCDC60Q8IWA6 550 aaPredicted RBP11.94□□□□□ -0.5
SSU72-202ENST00000359060 EFCAB13Q8IY85 973 aa11.94□□□□□ -0.5
SSU72-202ENST00000359060 ZBTB45Q96K62 511 aaPredicted RBP11.94□□□□□ -0.5
SSU72-202ENST00000359060 LCMT1Q9UIC8 334 aa11.94□□□□□ -0.5
SSU72-202ENST00000359060 AKT3Q9Y243 479 aa11.94□□□□□ -0.5
SSU72-202ENST00000359060 VGLL3A8MV65 326 aa11.93□□□□□ -0.5
SSU72-202ENST00000359060 SGK1O00141 431 aa11.93□□□□□ -0.5
SSU72-202ENST00000359060 RPS12P25398 132 aaKnown RBP11.93□□□□□ -0.5
SSU72-202ENST00000359060 STX2P32856 288 aa11.93□□□□□ -0.5
SSU72-202ENST00000359060 GTF2BQ00403 316 aa11.93□□□□□ -0.5
SSU72-202ENST00000359060 NCOA4Q13772 614 aa11.93□□□□□ -0.5
SSU72-202ENST00000359060 SLC29A2Q14542 456 aa11.93□□□□□ -0.5
SSU72-202ENST00000359060 R3HDM1Q15032 1099 aaKnown RBP11.93□□□□□ -0.5
SSU72-202ENST00000359060 SLC9A9Q8IVB4 645 aa11.93□□□□□ -0.5
SSU72-202ENST00000359060 MSL3Q8N5Y2 521 aaKnown RBP11.93□□□□□ -0.5
SSU72-202ENST00000359060 CCDC89Q8N998 374 aa11.93□□□□□ -0.5
SSU72-202ENST00000359060 TMEM161BQ8NDZ6 487 aa11.93□□□□□ -0.5
SSU72-202ENST00000359060 ATP8B4Q8TF62 1192 aa11.93□□□□□ -0.5
SSU72-202ENST00000359060 CRYGNQ8WXF5 182 aa11.93□□□□□ -0.5
SSU72-202ENST00000359060 CLEC4DQ8WXI8 215 aa11.93□□□□□ -0.5
SSU72-202ENST00000359060 CCT8L2Q96SF2 557 aa11.93□□□□□ -0.5
SSU72-202ENST00000359060 A1CFQ9NQ94 594 aaKnown RBP11.93□□□□□ -0.5
SSU72-202ENST00000359060 KIAA1551Q9HCM1 1747 aa11.93□□□□□ -0.5
SSU72-202ENST00000359060 JAM2P57087 298 aa11.93□□□□□ -0.5
SSU72-202ENST00000359060 MKRN3Q13064 507 aaKnown RBP11.93□□□□□ -0.5
SSU72-202ENST00000359060 ZNF568Q3ZCX4 644 aa11.93□□□□□ -0.5
SSU72-202ENST00000359060 SCYL2Q6P3W7 929 aa11.93□□□□□ -0.5
SSU72-202ENST00000359060 ERICH1Q86X53 443 aa11.93□□□□□ -0.5
SSU72-202ENST00000359060 CEP57Q86XR8 500 aa11.93□□□□□ -0.5
SSU72-202ENST00000359060 TEX2Q8IWB9 1127 aa11.93□□□□□ -0.5
SSU72-202ENST00000359060 CCDC13Q8IYE1 715 aa11.93□□□□□ -0.5
SSU72-202ENST00000359060 RBBP8NLQ8NC74 664 aaPredicted RBP11.93□□□□□ -0.5
SSU72-202ENST00000359060 MDM1Q8TC05 714 aa11.93□□□□□ -0.5
SSU72-202ENST00000359060 C7orf43Q8WVR3 580 aa11.93□□□□□ -0.5
SSU72-202ENST00000359060 ALG3Q92685 438 aa11.93□□□□□ -0.5
SSU72-202ENST00000359060 ANKRD36BP1Q96IX9 119 aa11.93□□□□□ -0.5
SSU72-202ENST00000359060 LAMB1P07942 1786 aa11.93□□□□□ -0.5
SSU72-202ENST00000359060 LAMB2P55268 1798 aa11.93□□□□□ -0.5
SSU72-202ENST00000359060 GMNCA6NCL1 334 aa11.93□□□□□ -0.5
SSU72-202ENST00000359060 PYGMP11217 842 aa11.93□□□□□ -0.5
SSU72-202ENST00000359060 NOP14P78316 857 aaKnown RBP11.93□□□□□ -0.5
SSU72-202ENST00000359060 NEDD9Q14511 834 aa11.93□□□□□ -0.5
SSU72-202ENST00000359060 ACAD10Q6JQN1 1059 aa11.93□□□□□ -0.5
SSU72-202ENST00000359060 XRRA1Q6P2D8 792 aa11.93□□□□□ -0.5
SSU72-202ENST00000359060 LRRC57Q8N9N7 239 aa11.93□□□□□ -0.5
SSU72-202ENST00000359060 SLC16A10Q8TF71 515 aa11.93□□□□□ -0.5
SSU72-202ENST00000359060 CYFIP2Q96F07 1278 aa11.93□□□□□ -0.5
SSU72-202ENST00000359060 ZWILCHQ9H900 591 aa11.93□□□□□ -0.5
SSU72-202ENST00000359060 ELP3Q9H9T3 547 aa11.93□□□□□ -0.5
SSU72-202ENST00000359060 EXTL3O43909 919 aa11.93□□□□□ -0.5
SSU72-202ENST00000359060 MAPTP10636 758 aaKnown RBP11.93□□□□□ -0.5
SSU72-202ENST00000359060 GZMAP12544 262 aa11.93□□□□□ -0.5
SSU72-202ENST00000359060 POLR2BP30876 1174 aaKnown RBP11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms