RNA–Protein interactions for RNA: ENST00000357348.9

RTFDC1-202, Transcript of Protein RTF2 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RTFDC1, Length 2,212 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-202ENST00000357348 GPIHBP1Q8IV16 184 aa13.65□□□□□ -0.22
RTFDC1-202ENST00000357348 MYCT1Q8N699 235 aa13.65□□□□□ -0.22
RTFDC1-202ENST00000357348 ZNF296Q8WUU4 475 aaPredicted RBP13.65□□□□□ -0.22
RTFDC1-202ENST00000357348 ZBTB10Q96DT7 871 aa13.65□□□□□ -0.22
RTFDC1-202ENST00000357348 OSBPL7Q9BZF2 842 aa13.65□□□□□ -0.22
RTFDC1-202ENST00000357348 MCM8Q9UJA3 840 aa13.65□□□□□ -0.22
RTFDC1-202ENST00000357348 RBM47A0AV96 593 aaKnown RBP13.64□□□□□ -0.23
RTFDC1-202ENST00000357348 LYPLA2O95372 231 aa13.64□□□□□ -0.23
RTFDC1-202ENST00000357348 OATP04181 439 aa13.64□□□□□ -0.23
RTFDC1-202ENST00000357348 MYCNP04198 464 aaPredicted RBP13.64□□□□□ -0.23
RTFDC1-202ENST00000357348 CASP5P51878 434 aa13.64□□□□□ -0.23
RTFDC1-202ENST00000357348 PPP2R2AP63151 447 aa13.64□□□□□ -0.23
RTFDC1-202ENST00000357348 LAMC2Q13753 1193 aa13.64□□□□□ -0.23
RTFDC1-202ENST00000357348 ASIC2Q16515 512 aa13.64□□□□□ -0.23
RTFDC1-202ENST00000357348 IFI16Q16666 785 aaKnown RBP13.64□□□□□ -0.23
RTFDC1-202ENST00000357348 FAM102BQ5T8I3 360 aa13.64□□□□□ -0.23
RTFDC1-202ENST00000357348 CCDC121Q6ZUS5 278 aa13.64□□□□□ -0.23
RTFDC1-202ENST00000357348 OTUD6AQ7L8S5 288 aa13.64□□□□□ -0.23
RTFDC1-202ENST00000357348 IRF2BP2Q7Z5L9 587 aa13.64□□□□□ -0.23
RTFDC1-202ENST00000357348 SLFN11Q7Z7L1 901 aa13.64□□□□□ -0.23
RTFDC1-202ENST00000357348 KSR1Q8IVT5 923 aa13.64□□□□□ -0.23
RTFDC1-202ENST00000357348 NELFCDQ8IXH7 590 aa13.64□□□□□ -0.23
RTFDC1-202ENST00000357348 KLHL7Q8IXQ5 586 aa13.64□□□□□ -0.23
RTFDC1-202ENST00000357348 GPATCH11Q8N954 259 aa13.64□□□□□ -0.23
RTFDC1-202ENST00000357348 NEUROG2Q9H2A3 272 aa13.64□□□□□ -0.23
RTFDC1-202ENST00000357348 ADAMTS1Q9UHI8 967 aa13.64□□□□□ -0.23
RTFDC1-202ENST00000357348 DBR1Q9UK59 544 aaKnown RBP13.64□□□□□ -0.23
RTFDC1-202ENST00000357348 STXBP5LQ9Y2K9 1186 aa13.64□□□□□ -0.23
RTFDC1-202ENST00000357348 IGKV6D-21A0A0A0MT36 114 aa13.64□□□□□ -0.23
RTFDC1-202ENST00000357348 TMCO5BA8MYB1 307 aa13.64□□□□□ -0.23
RTFDC1-202ENST00000357348 GHRP10912 638 aa13.64□□□□□ -0.23
RTFDC1-202ENST00000357348 BEX3Q00994 111 aa13.64□□□□□ -0.23
RTFDC1-202ENST00000357348 ANKRD20A8PQ5CZ79 823 aa13.64□□□□□ -0.23
RTFDC1-202ENST00000357348 XKR3Q5GH77 459 aa13.64□□□□□ -0.23
RTFDC1-202ENST00000357348 FAM160B1Q5W0V3 765 aa13.64□□□□□ -0.23
RTFDC1-202ENST00000357348 IQSEC1Q6DN90 963 aa13.64□□□□□ -0.23
RTFDC1-202ENST00000357348 CCDC50Q8IVM0 306 aa13.64□□□□□ -0.23
RTFDC1-202ENST00000357348 TRPV1Q8NER1 839 aa13.64□□□□□ -0.23
RTFDC1-202ENST00000357348 TRAPPC12Q8WVT3 735 aa13.64□□□□□ -0.23
RTFDC1-202ENST00000357348 EVPLQ92817 2033 aa13.64□□□□□ -0.23
RTFDC1-202ENST00000357348 TATDN2Q93075 761 aa13.64□□□□□ -0.23
RTFDC1-202ENST00000357348 JPH2Q9BR39 696 aaPredicted RBP13.64□□□□□ -0.23
RTFDC1-202ENST00000357348 BUD13Q9BRD0 619 aaKnown RBP eCLIP13.64□□□□□ -0.239e-7■□□□□ 10.7
RTFDC1-202ENST00000357348 SLITRK6Q9H5Y7 841 aa13.64□□□□□ -0.23
RTFDC1-202ENST00000357348 CD248Q9HCU0 757 aa13.64□□□□□ -0.23
RTFDC1-202ENST00000357348 PPANQ9NQ55 473 aaKnown RBP13.64□□□□□ -0.23
RTFDC1-202ENST00000357348 CYP26B1Q9NR63 512 aa13.64□□□□□ -0.23
RTFDC1-202ENST00000357348 UTP18Q9Y5J1 556 aaKnown RBP eCLIP13.64□□□□□ -0.23
RTFDC1-202ENST00000357348 BZW2Q9Y6E2 419 aaKnown RBP13.64□□□□□ -0.23
RTFDC1-202ENST00000357348 A0A0A6YYK5 440 aaPredicted RBP13.63□□□□□ -0.23
RTFDC1-202ENST00000357348 GOLGA6L7A0A1B0GV03 622 aa13.63□□□□□ -0.23
RTFDC1-202ENST00000357348 KCNK3O14649 394 aa13.63□□□□□ -0.23
RTFDC1-202ENST00000357348 SART1O43290 800 aaKnown RBP13.63□□□□□ -0.23
RTFDC1-202ENST00000357348 CHRM1P11229 460 aaPredicted RBP13.63□□□□□ -0.23
RTFDC1-202ENST00000357348 NMT1P30419 496 aaKnown RBP13.63□□□□□ -0.23
RTFDC1-202ENST00000357348 PRKCIP41743 596 aa13.63□□□□□ -0.23
RTFDC1-202ENST00000357348 IGBP1P78318 339 aa13.63□□□□□ -0.23
RTFDC1-202ENST00000357348 QPCTQ16769 361 aa13.63□□□□□ -0.23
RTFDC1-202ENST00000357348 TLK2Q86UE8 772 aa13.63□□□□□ -0.23
RTFDC1-202ENST00000357348 FUKQ8N0W3 1084 aa13.63□□□□□ -0.23
RTFDC1-202ENST00000357348 DAW1Q8N136 415 aa13.63□□□□□ -0.23
RTFDC1-202ENST00000357348 CENPTQ96BT3 561 aa13.63□□□□□ -0.23
RTFDC1-202ENST00000357348 SEC16BQ96JE7 1060 aa13.63□□□□□ -0.23
RTFDC1-202ENST00000357348 KCTD10Q9H3F6 313 aa13.63□□□□□ -0.23
RTFDC1-202ENST00000357348 RNPEPQ9H4A4 650 aa13.63□□□□□ -0.23
RTFDC1-202ENST00000357348 CNOT8Q9UFF9 292 aaKnown RBP13.63□□□□□ -0.23
RTFDC1-202ENST00000357348 TRPC6Q9Y210 931 aa13.63□□□□□ -0.23
RTFDC1-202ENST00000357348 KAT6AQ92794 2004 aa13.63□□□□□ -0.23
RTFDC1-202ENST00000357348 PGRMC1O00264 195 aaKnown RBP13.63□□□□□ -0.23
RTFDC1-202ENST00000357348 DNM1LO00429 736 aa13.63□□□□□ -0.23
RTFDC1-202ENST00000357348 DKC1O60832 514 aaKnown RBP eCLIP13.63□□□□□ -0.23
RTFDC1-202ENST00000357348 LGALS2P05162 132 aa13.63□□□□□ -0.23
RTFDC1-202ENST00000357348 HSPA6P17066 643 aa13.63□□□□□ -0.23
RTFDC1-202ENST00000357348 HPDP32754 393 aaPredicted RBP13.63□□□□□ -0.23
RTFDC1-202ENST00000357348 CTNNA1P35221 906 aaKnown RBP13.63□□□□□ -0.23
RTFDC1-202ENST00000357348 POU5F1Q01860 360 aaKnown RBP13.63□□□□□ -0.23
RTFDC1-202ENST00000357348 XRCC4Q13426 336 aa13.63□□□□□ -0.23
RTFDC1-202ENST00000357348 RAPGEF1Q13905 1077 aa13.63□□□□□ -0.23
RTFDC1-202ENST00000357348 HLTFQ14527 1009 aaKnown RBP eCLIP13.63□□□□□ -0.23
RTFDC1-202ENST00000357348 EDRF1Q3B7T1 1238 aa13.63□□□□□ -0.23
RTFDC1-202ENST00000357348 ZC2HC1CQ53FD0 456 aaPredicted RBP13.63□□□□□ -0.23
RTFDC1-202ENST00000357348 ODR4Q5SWX8 454 aa13.63□□□□□ -0.23
RTFDC1-202ENST00000357348 OR2W6PQ8NHA6 318 aa13.63□□□□□ -0.23
RTFDC1-202ENST00000357348 TLCD1Q96CP7 247 aa13.63□□□□□ -0.23
RTFDC1-202ENST00000357348 SGSM3Q96HU1 749 aa13.63□□□□□ -0.23
RTFDC1-202ENST00000357348 BEGAINQ9BUH8 593 aa13.63□□□□□ -0.23
RTFDC1-202ENST00000357348 TXLNGYQ9BZA5 131 aa13.63□□□□□ -0.23
RTFDC1-202ENST00000357348 IKZF4Q9H2S9 585 aa13.63□□□□□ -0.23
RTFDC1-202ENST00000357348 ANKEF1Q9NU02 776 aa13.63□□□□□ -0.23
RTFDC1-202ENST00000357348 DONSONQ9NYP3 566 aa13.63□□□□□ -0.23
RTFDC1-202ENST00000357348 TTC7AQ9ULT0 858 aaPredicted RBP13.63□□□□□ -0.23
RTFDC1-202ENST00000357348 KIF1CO43896 1103 aaKnown RBP13.62□□□□□ -0.23
RTFDC1-202ENST00000357348 GCNT3O95395 438 aa13.62□□□□□ -0.23
RTFDC1-202ENST00000357348 MMP3P08254 477 aa13.62□□□□□ -0.23
RTFDC1-202ENST00000357348 XRCC5P13010 732 aaKnown RBP13.62□□□□□ -0.23
RTFDC1-202ENST00000357348 POLGP54098 1239 aaPredicted RBP13.62□□□□□ -0.23
RTFDC1-202ENST00000357348 KCNA1Q09470 495 aa13.62□□□□□ -0.23
RTFDC1-202ENST00000357348 MAPK7Q13164 816 aa13.62□□□□□ -0.23
RTFDC1-202ENST00000357348 SPRED3Q2MJR0 410 aa13.62□□□□□ -0.23
RTFDC1-202ENST00000357348 MFSD14CQ5VZR4 134 aa13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms