RNA–Protein interactions for RNA: ENST00000357235.5

CDC42SE1-201, Transcript of CDC42 small effector 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42SE1, Length 3,045 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-201ENST00000357235 AGPAT3Q9NRZ7 376 aa8.8□□□□□ -1
CDC42SE1-201ENST00000357235 DLGAP2Q9P1A6 1054 aa8.8□□□□□ -1
CDC42SE1-201ENST00000357235 USP15Q9Y4E8 981 aaPredicted RBP8.8□□□□□ -1
CDC42SE1-201ENST00000357235 PCDHAC2Q9Y5I4 1007 aa8.8□□□□□ -1
CDC42SE1-201ENST00000357235 PASKQ96RG2 1323 aa8.79□□□□□ -1
CDC42SE1-201ENST00000357235 K7ENM7 598 aa8.79□□□□□ -1
CDC42SE1-201ENST00000357235 CYP26A1O43174 497 aa8.79□□□□□ -1
CDC42SE1-201ENST00000357235 THAP12O43422 761 aa8.79□□□□□ -1
CDC42SE1-201ENST00000357235 SNX3O60493 162 aa8.79□□□□□ -1
CDC42SE1-201ENST00000357235 EYA4O95677 639 aa8.79□□□□□ -1
CDC42SE1-201ENST00000357235 CALCAP01258 141 aa8.79□□□□□ -1
CDC42SE1-201ENST00000357235 GPC5P78333 572 aa8.79□□□□□ -1
CDC42SE1-201ENST00000357235 CETN1Q12798 172 aa8.79□□□□□ -1
CDC42SE1-201ENST00000357235 MPP3Q13368 585 aa8.79□□□□□ -1
CDC42SE1-201ENST00000357235 RASA3Q14644 834 aa8.79□□□□□ -1
CDC42SE1-201ENST00000357235 Q4G0T1 1027 aa8.79□□□□□ -1
CDC42SE1-201ENST00000357235 SGO2Q562F6 1265 aa8.79□□□□□ -1
CDC42SE1-201ENST00000357235 RNF220Q5VTB9 566 aa8.79□□□□□ -1
CDC42SE1-201ENST00000357235 FAM196AQ6ZSG2 479 aa8.79□□□□□ -1
CDC42SE1-201ENST00000357235 PIGWQ7Z7B1 504 aa8.79□□□□□ -1
CDC42SE1-201ENST00000357235 LCA5Q86VQ0 697 aa8.79□□□□□ -1
CDC42SE1-201ENST00000357235 ARHGEF19Q8IW93 802 aa8.79□□□□□ -1
CDC42SE1-201ENST00000357235 RPS6KC1Q96S38 1066 aa8.79□□□□□ -1
CDC42SE1-201ENST00000357235 NDNQ99608 321 aa8.79□□□□□ -1
CDC42SE1-201ENST00000357235 ZSWIM1Q9BR11 485 aa8.79□□□□□ -1
CDC42SE1-201ENST00000357235 TXLNGYQ9BZA5 131 aa8.79□□□□□ -1
CDC42SE1-201ENST00000357235 ATXN10Q9UBB4 475 aa8.79□□□□□ -1
CDC42SE1-201ENST00000357235 PARP2Q9UGN5 583 aa8.79□□□□□ -1
CDC42SE1-201ENST00000357235 COL22A1Q8NFW1 1626 aaPredicted RBP8.79□□□□□ -1
CDC42SE1-201ENST00000357235 PFASO15067 1338 aa8.79□□□□□ -1
CDC42SE1-201ENST00000357235 F5H6K3 240 aa8.79□□□□□ -1
CDC42SE1-201ENST00000357235 LGR5O75473 907 aa8.79□□□□□ -1
CDC42SE1-201ENST00000357235 SGPL1O95470 568 aa8.79□□□□□ -1
CDC42SE1-201ENST00000357235 RARAP10276 462 aa8.79□□□□□ -1
CDC42SE1-201ENST00000357235 BRAFP15056 766 aa8.79□□□□□ -1
CDC42SE1-201ENST00000357235 KRT17Q04695 432 aa8.79□□□□□ -1
CDC42SE1-201ENST00000357235 TMEM62Q0P6H9 643 aa8.79□□□□□ -1
CDC42SE1-201ENST00000357235 BFSP1Q12934 665 aa8.79□□□□□ -1
CDC42SE1-201ENST00000357235 ITIH4Q14624 930 aa8.79□□□□□ -1
CDC42SE1-201ENST00000357235 VPS72Q15906 364 aa8.79□□□□□ -1
CDC42SE1-201ENST00000357235 DAB2IPQ5VWQ8 1189 aa8.79□□□□□ -1
CDC42SE1-201ENST00000357235 PRR5LQ6MZQ0 368 aa8.79□□□□□ -1
CDC42SE1-201ENST00000357235 CYP4F22Q6NT55 531 aa8.79□□□□□ -1
CDC42SE1-201ENST00000357235 CCDC174Q6PII3 467 aa8.79□□□□□ -1
CDC42SE1-201ENST00000357235 RNF207Q6ZRF8 634 aa8.79□□□□□ -1
CDC42SE1-201ENST00000357235 FBF1Q8TES7 1133 aa8.79□□□□□ -1
CDC42SE1-201ENST00000357235 LENG9Q96B70 501 aa8.79□□□□□ -1
CDC42SE1-201ENST00000357235 CENPTQ96BT3 561 aa8.79□□□□□ -1
CDC42SE1-201ENST00000357235 ZNF653Q96CK0 615 aa8.79□□□□□ -1
CDC42SE1-201ENST00000357235 SLX1AQ9BQ83 275 aa8.79□□□□□ -1
CDC42SE1-201ENST00000357235 NUP85Q9BW27 656 aa8.79□□□□□ -1
CDC42SE1-201ENST00000357235 HEMGNQ9BXL5 484 aa8.79□□□□□ -1
CDC42SE1-201ENST00000357235 TRIM7Q9C029 511 aa8.79□□□□□ -1
CDC42SE1-201ENST00000357235 ZC3H12CQ9C0D7 883 aaKnown RBP8.79□□□□□ -1
CDC42SE1-201ENST00000357235 GPR88Q9GZN0 384 aa8.79□□□□□ -1
CDC42SE1-201ENST00000357235 DMAP1Q9NPF5 467 aaPredicted RBP8.79□□□□□ -1
CDC42SE1-201ENST00000357235 DIS3Q9Y2L1 958 aaKnown RBP8.79□□□□□ -1
CDC42SE1-201ENST00000357235 LRRC42Q9Y546 428 aa8.79□□□□□ -1
CDC42SE1-201ENST00000357235 RREB1Q92766 1687 aa8.79□□□□□ -1
CDC42SE1-201ENST00000357235 GAS7O60861 476 aa8.78□□□□□ -1
CDC42SE1-201ENST00000357235 ZNF189O75820 626 aaPredicted RBP8.78□□□□□ -1
CDC42SE1-201ENST00000357235 KRT16P08779 473 aa8.78□□□□□ -1
CDC42SE1-201ENST00000357235 SP100P23497 879 aaPredicted RBP8.78□□□□□ -1
CDC42SE1-201ENST00000357235 ANXA13P27216 316 aa8.78□□□□□ -1
CDC42SE1-201ENST00000357235 CHKAP35790 457 aa8.78□□□□□ -1
CDC42SE1-201ENST00000357235 COILP38432 576 aaPredicted RBP8.78□□□□□ -1
CDC42SE1-201ENST00000357235 RFC5P40937 340 aa8.78□□□□□ -1
CDC42SE1-201ENST00000357235 PTGIRP43119 386 aa8.78□□□□□ -1
CDC42SE1-201ENST00000357235 ZYXQ15942 572 aaKnown RBP8.78□□□□□ -1
CDC42SE1-201ENST00000357235 EPC2Q52LR7 807 aa8.78□□□□□ -1
CDC42SE1-201ENST00000357235 DPY19L2Q6NUT2 758 aa8.78□□□□□ -1
CDC42SE1-201ENST00000357235 CDC42EP5Q6NZY7 148 aa8.78□□□□□ -1
CDC42SE1-201ENST00000357235 RNF168Q8IYW5 571 aaPredicted RBP8.78□□□□□ -1
CDC42SE1-201ENST00000357235 SLC17A8Q8NDX2 589 aa8.78□□□□□ -1
CDC42SE1-201ENST00000357235 IFT74Q96LB3 600 aa8.78□□□□□ -1
CDC42SE1-201ENST00000357235 TGS1Q96RS0 853 aaKnown RBP8.78□□□□□ -1
CDC42SE1-201ENST00000357235 LBHD1Q9BQE6 289 aaPredicted RBP8.78□□□□□ -1
CDC42SE1-201ENST00000357235 GLT8D2Q9H1C3 349 aa8.78□□□□□ -1
CDC42SE1-201ENST00000357235 SDAD1Q9NVU7 687 aaKnown RBP eCLIP8.78□□□□□ -1
CDC42SE1-201ENST00000357235 ADAM22Q9P0K1 906 aa8.78□□□□□ -1
CDC42SE1-201ENST00000357235 TTC7AQ9ULT0 858 aaPredicted RBP8.78□□□□□ -1
CDC42SE1-201ENST00000357235 NENFQ9UMX5 172 aa8.78□□□□□ -1
CDC42SE1-201ENST00000357235 ZNF510Q9Y2H8 683 aa8.78□□□□□ -1
CDC42SE1-201ENST00000357235 NCANO14594 1321 aa8.78□□□□□ -1
CDC42SE1-201ENST00000357235 IGKV6D-41A0A0C4DH26 115 aa8.78□□□□□ -1
CDC42SE1-201ENST00000357235 A0A1W2PRG0 241 aa8.78□□□□□ -1
CDC42SE1-201ENST00000357235 GTPBP10A4D1E9 387 aaKnown RBP8.78□□□□□ -1
CDC42SE1-201ENST00000357235 ARHGEF35A5YM69 484 aa8.78□□□□□ -1
CDC42SE1-201ENST00000357235 SLITRK3O94933 977 aa8.78□□□□□ -1
CDC42SE1-201ENST00000357235 RARGP13631 454 aa8.78□□□□□ -1
CDC42SE1-201ENST00000357235 IL1R1P14778 569 aa8.78□□□□□ -1
CDC42SE1-201ENST00000357235 GBP1P32455 592 aa8.78□□□□□ -1
CDC42SE1-201ENST00000357235 ADCY8P40145 1251 aa8.78□□□□□ -1
CDC42SE1-201ENST00000357235 MSH2P43246 934 aa8.78□□□□□ -1
CDC42SE1-201ENST00000357235 PSMC4P43686 418 aa8.78□□□□□ -1
CDC42SE1-201ENST00000357235 NCALDP61601 193 aa8.78□□□□□ -1
CDC42SE1-201ENST00000357235 DEUP1Q05D60 604 aa8.78□□□□□ -1
CDC42SE1-201ENST00000357235 AP3B2Q13367 1082 aa8.78□□□□□ -1
CDC42SE1-201ENST00000357235 PABPC1LQ4VXU2 614 aaKnown RBP8.78□□□□□ -1
CDC42SE1-201ENST00000357235 ZNF720Q7Z2F6 126 aa8.78□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms