RNA–Protein interactions for RNA: ENST00000354822.6

NKX2-1-201, Transcript of NK2 homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene NKX2-1, Length 2,191 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-1-201ENST00000354822 FZD1Q9UP38 647 aa23.88■■□□□ 1.41
NKX2-1-201ENST00000354822 STYXL1Q9Y6J8 313 aa23.88■■□□□ 1.41
NKX2-1-201ENST00000354822 ARID2Q68CP9 1835 aa23.88■■□□□ 1.41
NKX2-1-201ENST00000354822 MYO1CO00159 1063 aa23.88■■□□□ 1.41
NKX2-1-201ENST00000354822 ZEB2O60315 1214 aa23.88■■□□□ 1.41
NKX2-1-201ENST00000354822 GRIN3BO60391 1043 aa23.88■■□□□ 1.41
NKX2-1-201ENST00000354822 ATG7O95352 703 aa23.88■■□□□ 1.41
NKX2-1-201ENST00000354822 PSMD6Q15008 389 aa23.88■■□□□ 1.41
NKX2-1-201ENST00000354822 WDR44Q5JSH3 913 aa23.88■■□□□ 1.41
NKX2-1-201ENST00000354822 NOL9Q5SY16 702 aaKnown RBP23.88■■□□□ 1.41
NKX2-1-201ENST00000354822 AGBL2Q5U5Z8 902 aa23.88■■□□□ 1.41
NKX2-1-201ENST00000354822 TAS1R3Q7RTX0 852 aa23.88■■□□□ 1.41
NKX2-1-201ENST00000354822 MAGOHBQ96A72 148 aaKnown RBP23.88■■□□□ 1.41
NKX2-1-201ENST00000354822 FNBP1Q96RU3 617 aa23.88■■□□□ 1.41
NKX2-1-201ENST00000354822 PARP2Q9UGN5 583 aa23.88■■□□□ 1.41
NKX2-1-201ENST00000354822 SRRM3A6NNA2 597 aaPredicted RBP23.87■■□□□ 1.41
NKX2-1-201ENST00000354822 EBAG9O00559 213 aa23.87■■□□□ 1.41
NKX2-1-201ENST00000354822 KRT5P13647 590 aa23.87■■□□□ 1.41
NKX2-1-201ENST00000354822 ATP1A2P50993 1020 aa23.87■■□□□ 1.41
NKX2-1-201ENST00000354822 POLGP54098 1239 aaPredicted RBP23.87■■□□□ 1.41
NKX2-1-201ENST00000354822 SP4Q02446 784 aa23.87■■□□□ 1.41
NKX2-1-201ENST00000354822 CLEC16AQ2KHT3 1053 aa23.87■■□□□ 1.41
NKX2-1-201ENST00000354822 MTERF2Q49AM1 385 aa23.87■■□□□ 1.41
NKX2-1-201ENST00000354822 SLFN12LQ6IEE8 588 aa23.87■■□□□ 1.41
NKX2-1-201ENST00000354822 PRELID2Q8N945 189 aa23.87■■□□□ 1.41
NKX2-1-201ENST00000354822 CHST13Q8NET6 341 aa23.87■■□□□ 1.41
NKX2-1-201ENST00000354822 DHX38Q92620 1227 aaKnown RBP23.87■■□□□ 1.41
NKX2-1-201ENST00000354822 MAFBQ9Y5Q3 323 aaPredicted RBP23.87■■□□□ 1.41
NKX2-1-201ENST00000354822 FAM170AA1A519 330 aa23.86■■□□□ 1.41
NKX2-1-201ENST00000354822 RWDD2BP57060 319 aa23.86■■□□□ 1.41
NKX2-1-201ENST00000354822 EMC2Q15006 297 aa23.86■■□□□ 1.41
NKX2-1-201ENST00000354822 CYP1B1Q16678 543 aa23.86■■□□□ 1.41
NKX2-1-201ENST00000354822 PSPC1Q8WXF1 523 aaKnown RBP23.86■■□□□ 1.41
NKX2-1-201ENST00000354822 GLG1Q92896 1179 aa23.86■■□□□ 1.41
NKX2-1-201ENST00000354822 TRIM11Q96F44 468 aa23.86■■□□□ 1.41
NKX2-1-201ENST00000354822 TXLNGYQ9BZA5 131 aa23.86■■□□□ 1.41
NKX2-1-201ENST00000354822 ZDHHC18Q9NUE0 388 aa23.86■■□□□ 1.41
NKX2-1-201ENST00000354822 PTGIRP43119 386 aa23.86■■□□□ 1.41
NKX2-1-201ENST00000354822 HIRAP54198 1017 aaPredicted RBP23.86■■□□□ 1.41
NKX2-1-201ENST00000354822 PDCLQ13371 301 aa23.86■■□□□ 1.41
NKX2-1-201ENST00000354822 TRIM31Q9BZY9 425 aa23.86■■□□□ 1.41
NKX2-1-201ENST00000354822 ZNF302Q9NR11 478 aa23.86■■□□□ 1.41
NKX2-1-201ENST00000354822 CNOT8Q9UFF9 292 aaKnown RBP23.86■■□□□ 1.41
NKX2-1-201ENST00000354822 PCDHB2Q9Y5E7 798 aa23.86■■□□□ 1.41
NKX2-1-201ENST00000354822 SSC5DA1L4H1 1573 aa23.86■■□□□ 1.41
NKX2-1-201ENST00000354822 SPDYE16A6NNV3 312 aaPredicted RBP23.85■■□□□ 1.41
NKX2-1-201ENST00000354822 ATMINO43313 823 aaPredicted RBP23.85■■□□□ 1.41
NKX2-1-201ENST00000354822 LDHAP00338 332 aaKnown RBP23.85■■□□□ 1.41
NKX2-1-201ENST00000354822 MYBL1P10243 752 aa23.85■■□□□ 1.41
NKX2-1-201ENST00000354822 PYGMP11217 842 aa23.85■■□□□ 1.41
NKX2-1-201ENST00000354822 MDH1P40925 334 aaKnown RBP23.85■■□□□ 1.41
NKX2-1-201ENST00000354822 MARCKSL1P49006 195 aa23.85■■□□□ 1.41
NKX2-1-201ENST00000354822 SLC13A5Q86YT5 568 aaPredicted RBP23.85■■□□□ 1.41
NKX2-1-201ENST00000354822 AFG3L2Q9Y4W6 797 aa23.85■■□□□ 1.41
NKX2-1-201ENST00000354822 PIGRP01833 764 aa23.85■■□□□ 1.41
NKX2-1-201ENST00000354822 NAMPTP43490 491 aa23.85■■□□□ 1.41
NKX2-1-201ENST00000354822 ZACNQ401N2 412 aa23.85■■□□□ 1.41
NKX2-1-201ENST00000354822 PORCNQ9H237 461 aa23.85■■□□□ 1.41
NKX2-1-201ENST00000354822 AVENQ9NQS1 362 aaPredicted RBP23.85■■□□□ 1.41
NKX2-1-201ENST00000354822 CHORDC1Q9UHD1 332 aaPredicted RBP23.85■■□□□ 1.41
NKX2-1-201ENST00000354822 LCMT1Q9UIC8 334 aa23.85■■□□□ 1.41
NKX2-1-201ENST00000354822 AGO2Q9UKV8 859 aaKnown RBP23.85■■□□□ 1.41
NKX2-1-201ENST00000354822 OATP04181 439 aa23.84■■□□□ 1.41
NKX2-1-201ENST00000354822 LSP1P33241 339 aa23.84■■□□□ 1.41
NKX2-1-201ENST00000354822 COPB2P35606 906 aa23.84■■□□□ 1.41
NKX2-1-201ENST00000354822 SH3D19Q5HYK7 790 aa23.84■■□□□ 1.41
NKX2-1-201ENST00000354822 TTC19Q6DKK2 380 aaPredicted RBP23.84■■□□□ 1.41
NKX2-1-201ENST00000354822 AADACL2Q6P093 401 aa23.84■■□□□ 1.41
NKX2-1-201ENST00000354822 CCDC137Q6PK04 289 aaKnown RBP23.84■■□□□ 1.41
NKX2-1-201ENST00000354822 ZNF516Q92618 1163 aa23.84■■□□□ 1.41
NKX2-1-201ENST00000354822 C18orf8Q96DM3 657 aa23.84■■□□□ 1.41
NKX2-1-201ENST00000354822 FAM129AQ9BZQ8 928 aa23.84■■□□□ 1.41
NKX2-1-201ENST00000354822 EPN3Q9H201 632 aa23.84■■□□□ 1.41
NKX2-1-201ENST00000354822 CENPHQ9H3R5 247 aa23.84■■□□□ 1.41
NKX2-1-201ENST00000354822 DHX33Q9H6R0 707 aaKnown RBP23.84■■□□□ 1.41
NKX2-1-201ENST00000354822 MYO1FO00160 1098 aa23.84■■□□□ 1.41
NKX2-1-201ENST00000354822 UNGP13051 313 aaPredicted RBP23.84■■□□□ 1.41
NKX2-1-201ENST00000354822 TNNI1P19237 187 aa23.84■■□□□ 1.41
NKX2-1-201ENST00000354822 CCT5P48643 541 aa23.84■■□□□ 1.41
NKX2-1-201ENST00000354822 OR2W6PQ8NHA6 318 aa23.84■■□□□ 1.41
NKX2-1-201ENST00000354822 NIFKQ9BYG3 293 aaKnown RBP23.84■■□□□ 1.41
NKX2-1-201ENST00000354822 TELO2Q9Y4R8 837 aa23.84■■□□□ 1.41
NKX2-1-201ENST00000354822 K7ERI5 159 aa23.83■■□□□ 1.41
NKX2-1-201ENST00000354822 C4BPAP04003 597 aaKnown RBP23.83■■□□□ 1.41
NKX2-1-201ENST00000354822 FNTAP49354 379 aa23.83■■□□□ 1.41
NKX2-1-201ENST00000354822 SP2Q02086 613 aa23.83■■□□□ 1.41
NKX2-1-201ENST00000354822 CYFIP1Q7L576 1253 aa23.83■■□□□ 1.41
NKX2-1-201ENST00000354822 DEPTORQ8TB45 409 aa23.83■■□□□ 1.41
NKX2-1-201ENST00000354822 PI4K2AQ9BTU6 479 aa23.83■■□□□ 1.41
NKX2-1-201ENST00000354822 ATP8A1Q9Y2Q0 1164 aa23.83■■□□□ 1.41
NKX2-1-201ENST00000354822 SLC1A1P43005 524 aa23.82■■□□□ 1.4
NKX2-1-201ENST00000354822 B4GALNT4Q76KP1 1039 aa23.82■■□□□ 1.4
NKX2-1-201ENST00000354822 C12orf50Q8NA57 414 aaPredicted RBP23.82■■□□□ 1.4
NKX2-1-201ENST00000354822 SLC7A3Q8WY07 619 aa23.82■■□□□ 1.4
NKX2-1-201ENST00000354822 MTRF1LQ9UGC7 380 aaKnown RBP23.82■■□□□ 1.4
NKX2-1-201ENST00000354822 SNX24Q9Y343 169 aa23.82■■□□□ 1.4
NKX2-1-201ENST00000354822 MYH9P35579 1960 aaKnown RBP23.82■■□□□ 1.4
NKX2-1-201ENST00000354822 NDUFAB1O14561 156 aa23.82■■□□□ 1.4
NKX2-1-201ENST00000354822 ATP4AP20648 1035 aa23.82■■□□□ 1.4
NKX2-1-201ENST00000354822 MAPK4P31152 587 aa23.82■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms