RNA–Protein interactions for RNA: ENST00000354098.7

SHMT1-203, Transcript of serine hydroxymethyltransferase 1, humanhuman

TSL 1 (best) BASIC

Gene SHMT1, Length 1,656 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT1-203ENST00000354098 MLKLQ8NB16 471 aa24.11■■□□□ 1.45
SHMT1-203ENST00000354098 URGCPQ8TCY9 931 aa24.11■■□□□ 1.45
SHMT1-203ENST00000354098 NELFBQ8WX92 580 aa24.11■■□□□ 1.45
SHMT1-203ENST00000354098 FAM212AQ96EL1 285 aa24.11■■□□□ 1.45
SHMT1-203ENST00000354098 EEF2KMTQ96G04 330 aa24.11■■□□□ 1.45
SHMT1-203ENST00000354098 FBXL18Q96ME1 805 aa24.11■■□□□ 1.45
SHMT1-203ENST00000354098 ZMAT2Q96NC0 199 aaKnown RBP24.11■■□□□ 1.45
SHMT1-203ENST00000354098 RPS6KC1Q96S38 1066 aa24.11■■□□□ 1.45
SHMT1-203ENST00000354098 LACTBL1A8MY62 500 aa24.11■■□□□ 1.45
SHMT1-203ENST00000354098 KIAA0391O15091 583 aaKnown RBP24.11■■□□□ 1.45
SHMT1-203ENST00000354098 EXOC3O60645 756 aa24.11■■□□□ 1.45
SHMT1-203ENST00000354098 DDHD2O94830 711 aa24.11■■□□□ 1.45
SHMT1-203ENST00000354098 PPP1R2P41236 205 aa24.11■■□□□ 1.45
SHMT1-203ENST00000354098 WNT7BP56706 349 aa24.11■■□□□ 1.45
SHMT1-203ENST00000354098 STX17P56962 302 aa24.11■■□□□ 1.45
SHMT1-203ENST00000354098 SLC9A9Q8IVB4 645 aa24.11■■□□□ 1.45
SHMT1-203ENST00000354098 LRRC43Q8N309 656 aa24.11■■□□□ 1.45
SHMT1-203ENST00000354098 TMEM174Q8WUU8 243 aa24.11■■□□□ 1.45
SHMT1-203ENST00000354098 CWH43Q9H720 699 aa24.11■■□□□ 1.45
SHMT1-203ENST00000354098 SMIM28A0A1B0GU29 152 aa24.1■■□□□ 1.45
SHMT1-203ENST00000354098 TULP1O00294 542 aaPredicted RBP24.1■■□□□ 1.45
SHMT1-203ENST00000354098 LINC00271P0C7V0 271 aa24.1■■□□□ 1.45
SHMT1-203ENST00000354098 NR2F2P24468 414 aa24.1■■□□□ 1.45
SHMT1-203ENST00000354098 CASP4P49662 377 aa24.1■■□□□ 1.45
SHMT1-203ENST00000354098 RNASELQ05823 741 aaKnown RBP24.1■■□□□ 1.45
SHMT1-203ENST00000354098 SASS6Q6UVJ0 657 aa24.1■■□□□ 1.45
SHMT1-203ENST00000354098 MRPL9Q9BYD2 267 aaKnown RBP24.1■■□□□ 1.45
SHMT1-203ENST00000354098 CNTN3Q9P232 1028 aa24.1■■□□□ 1.45
SHMT1-203ENST00000354098 ADRB2P07550 413 aa24.09■■□□□ 1.45
SHMT1-203ENST00000354098 TAP1Q03518 808 aa24.09■■□□□ 1.45
SHMT1-203ENST00000354098 PAK1Q13153 545 aa24.09■■□□□ 1.45
SHMT1-203ENST00000354098 ADAM9Q13443 819 aa24.09■■□□□ 1.45
SHMT1-203ENST00000354098 SNRNP35Q16560 246 aaKnown RBP24.09■■□□□ 1.45
SHMT1-203ENST00000354098 NFIL3Q16649 462 aa24.09■■□□□ 1.45
SHMT1-203ENST00000354098 EDRF1Q3B7T1 1238 aa24.09■■□□□ 1.45
SHMT1-203ENST00000354098 HABP4Q5JVS0 413 aaKnown RBP24.09■■□□□ 1.45
SHMT1-203ENST00000354098 TIFAQ96CG3 184 aa24.09■■□□□ 1.45
SHMT1-203ENST00000354098 LRCH3Q96II8 777 aa24.09■■□□□ 1.45
SHMT1-203ENST00000354098 MED15Q96RN5 788 aa24.09■■□□□ 1.45
SHMT1-203ENST00000354098 NRDE2Q9H7Z3 1164 aa24.09■■□□□ 1.45
SHMT1-203ENST00000354098 PLEKHA5Q9HAU0 1116 aa24.09■■□□□ 1.45
SHMT1-203ENST00000354098 RBAKQ9NYW8 714 aaPredicted RBP24.09■■□□□ 1.45
SHMT1-203ENST00000354098 KANSL3Q9P2N6 904 aa24.09■■□□□ 1.45
SHMT1-203ENST00000354098 DNAJB4Q9UDY4 337 aa24.09■■□□□ 1.45
SHMT1-203ENST00000354098 ZNF233A6NK53 670 aa24.08■■□□□ 1.45
SHMT1-203ENST00000354098 PPP2R3AQ06190 1150 aa24.08■■□□□ 1.45
SHMT1-203ENST00000354098 NAB2Q15742 525 aa24.08■■□□□ 1.45
SHMT1-203ENST00000354098 TTI2Q6NXR4 508 aa24.08■■□□□ 1.45
SHMT1-203ENST00000354098 BRSK2Q8IWQ3 736 aa24.08■■□□□ 1.45
SHMT1-203ENST00000354098 PPP1R10Q96QC0 940 aaKnown RBP24.08■■□□□ 1.45
SHMT1-203ENST00000354098 TSG101Q99816 390 aa24.08■■□□□ 1.45
SHMT1-203ENST00000354098 DUSP9Q99956 384 aaKnown RBP24.08■■□□□ 1.45
SHMT1-203ENST00000354098 KIAA1586Q9HCI6 787 aa24.08■■□□□ 1.45
SHMT1-203ENST00000354098 THP07101 528 aa24.08■■□□□ 1.44
SHMT1-203ENST00000354098 KCNE1P15382 129 aa24.08■■□□□ 1.44
SHMT1-203ENST00000354098 PBX3P40426 434 aa24.08■■□□□ 1.44
SHMT1-203ENST00000354098 LRRC63Q05C16 580 aa24.08■■□□□ 1.44
SHMT1-203ENST00000354098 GRIK3Q13003 919 aa24.08■■□□□ 1.44
SHMT1-203ENST00000354098 MYBPC2Q14324 1141 aa24.08■■□□□ 1.44
SHMT1-203ENST00000354098 SPOUT1Q5T280 376 aaKnown RBP24.08■■□□□ 1.44
SHMT1-203ENST00000354098 CEP135Q66GS9 1140 aa24.08■■□□□ 1.44
SHMT1-203ENST00000354098 PPP2R2DQ66LE6 453 aa24.08■■□□□ 1.44
SHMT1-203ENST00000354098 TMEM130Q8N3G9 435 aa24.08■■□□□ 1.44
SHMT1-203ENST00000354098 RSPH1Q8WYR4 309 aa24.08■■□□□ 1.44
SHMT1-203ENST00000354098 SLC28A3Q9HAS3 691 aa24.08■■□□□ 1.44
SHMT1-203ENST00000354098 CACNG4Q9UBN1 327 aa24.08■■□□□ 1.44
SHMT1-203ENST00000354098 RPL13P26373 211 aaKnown RBP24.07■■□□□ 1.44
SHMT1-203ENST00000354098 POU5F1Q01860 360 aaKnown RBP24.07■■□□□ 1.44
SHMT1-203ENST00000354098 CHD9Q3L8U1 2897 aa24.07■■□□□ 1.44
SHMT1-203ENST00000354098 CLP1Q92989 425 aaKnown RBP24.07■■□□□ 1.44
SHMT1-203ENST00000354098 C18orf25Q96B23 403 aaPredicted RBP24.07■■□□□ 1.44
SHMT1-203ENST00000354098 C17orf80Q9BSJ5 609 aa24.07■■□□□ 1.44
SHMT1-203ENST00000354098 CERS4Q9HA82 394 aa24.07■■□□□ 1.44
SHMT1-203ENST00000354098 PDE11AQ9HCR9 933 aa24.07■■□□□ 1.44
SHMT1-203ENST00000354098 MTUS1Q9ULD2 1270 aa24.07■■□□□ 1.44
SHMT1-203ENST00000354098 SYCE3A1L190 88 aa24.06■■□□□ 1.44
SHMT1-203ENST00000354098 ZC3H11AO75152 810 aaKnown RBP eCLIP24.06■■□□□ 1.44
SHMT1-203ENST00000354098 AKAP3O75969 853 aa24.06■■□□□ 1.44
SHMT1-203ENST00000354098 SOX4Q06945 474 aaPredicted RBP24.06■■□□□ 1.44
SHMT1-203ENST00000354098 DSC1Q08554 894 aa24.06■■□□□ 1.44
SHMT1-203ENST00000354098 JADE1Q6IE81 842 aa24.06■■□□□ 1.44
SHMT1-203ENST00000354098 COLGALT2Q8IYK4 626 aa24.06■■□□□ 1.44
SHMT1-203ENST00000354098 FAM193BQ96PV7 902 aaPredicted RBP24.06■■□□□ 1.44
SHMT1-203ENST00000354098 RWDD2AQ9UIY3 292 aa24.06■■□□□ 1.44
SHMT1-203ENST00000354098 CITO14578 2027 aa24.06■■□□□ 1.44
SHMT1-203ENST00000354098 TRIP11Q15643 1979 aa24.06■■□□□ 1.44
SHMT1-203ENST00000354098 NFICP08651 508 aa24.05■■□□□ 1.44
SHMT1-203ENST00000354098 TYRO3Q06418 890 aa24.05■■□□□ 1.44
SHMT1-203ENST00000354098 CYP24A1Q07973 514 aa24.05■■□□□ 1.44
SHMT1-203ENST00000354098 CD302Q8IX05 232 aa24.05■■□□□ 1.44
SHMT1-203ENST00000354098 ZC3H3Q8IXZ2 948 aaKnown RBP24.05■■□□□ 1.44
SHMT1-203ENST00000354098 RABGGTAQ92696 567 aa24.05■■□□□ 1.44
SHMT1-203ENST00000354098 KIF12Q96FN5 646 aa24.05■■□□□ 1.44
SHMT1-203ENST00000354098 FAM84AQ96KN4 292 aa24.05■■□□□ 1.44
SHMT1-203ENST00000354098 MFSD14AQ96MC6 490 aa24.05■■□□□ 1.44
SHMT1-203ENST00000354098 ASB7Q9H672 318 aa24.05■■□□□ 1.44
SHMT1-203ENST00000354098 GOLGA2P5Q9HBQ8 144 aa24.05■■□□□ 1.44
SHMT1-203ENST00000354098 BICDL2A1A5D9 508 aa24.05■■□□□ 1.44
SHMT1-203ENST00000354098 NT5C1B-RDH14C9J2C7 533 aa24.05■■□□□ 1.44
SHMT1-203ENST00000354098 IL18RAPO95256 599 aa24.05■■□□□ 1.44
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms