RNA–Protein interactions for RNA: ENST00000352818.8

CD44-205, Transcript of CD44 molecule (Indian blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD44, Length 1,023 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-205ENST00000352818 BAG1Q99933 345 aaPredicted RBP9.02□□□□□ -0.97
CD44-205ENST00000352818 MAF1Q9H063 256 aa9.02□□□□□ -0.97
CD44-205ENST00000352818 BMP2KQ9NSY1 1161 aaPredicted RBP9.02□□□□□ -0.97
CD44-205ENST00000352818 MAGEC2Q9UBF1 373 aaPredicted RBP9.02□□□□□ -0.97
CD44-205ENST00000352818 USP27XA6NNY8 438 aa9.01□□□□□ -0.97
CD44-205ENST00000352818 ZSCAN12O43309 604 aa9.01□□□□□ -0.97
CD44-205ENST00000352818 KIF20AO95235 890 aa9.01□□□□□ -0.97
CD44-205ENST00000352818 TOP3BO95985 862 aaKnown RBP9.01□□□□□ -0.97
CD44-205ENST00000352818 GYPCP04921 128 aa9.01□□□□□ -0.97
CD44-205ENST00000352818 PLA2G4BP0C869 781 aa9.01□□□□□ -0.97
CD44-205ENST00000352818 GHRP10912 638 aa9.01□□□□□ -0.97
CD44-205ENST00000352818 CYP11B2P19099 503 aa9.01□□□□□ -0.97
CD44-205ENST00000352818 DNM2P50570 870 aa9.01□□□□□ -0.97
CD44-205ENST00000352818 SLC12A3P55017 1021 aa9.01□□□□□ -0.97
CD44-205ENST00000352818 CSTF1Q05048 431 aaKnown RBP9.01□□□□□ -0.97
CD44-205ENST00000352818 PPP2R5CQ13362 524 aa9.01□□□□□ -0.97
CD44-205ENST00000352818 LPIN1Q14693 890 aa9.01□□□□□ -0.97
CD44-205ENST00000352818 ZCWPW2Q504Y3 356 aa9.01□□□□□ -0.97
CD44-205ENST00000352818 FAM26FQ5R3K3 315 aa9.01□□□□□ -0.97
CD44-205ENST00000352818 RARS2Q5T160 578 aaKnown RBP9.01□□□□□ -0.97
CD44-205ENST00000352818 CEP135Q66GS9 1140 aa9.01□□□□□ -0.97
CD44-205ENST00000352818 CES5AQ6NT32 575 aa9.01□□□□□ -0.97
CD44-205ENST00000352818 CCDC65Q8IXS2 484 aa9.01□□□□□ -0.97
CD44-205ENST00000352818 DHX37Q8IY37 1157 aaKnown RBP9.01□□□□□ -0.97
CD44-205ENST00000352818 CSGALNACT2Q8N6G5 542 aa9.01□□□□□ -0.97
CD44-205ENST00000352818 PJA1Q8NG27 643 aa9.01□□□□□ -0.97
CD44-205ENST00000352818 SLC5A5Q92911 643 aa9.01□□□□□ -0.97
CD44-205ENST00000352818 ATP6V0A1Q93050 837 aa9.01□□□□□ -0.97
CD44-205ENST00000352818 SECISBP2LQ93073 1101 aaKnown RBP9.01□□□□□ -0.97
CD44-205ENST00000352818 EMID1Q96A84 441 aaPredicted RBP9.01□□□□□ -0.97
CD44-205ENST00000352818 C16orf70Q9BSU1 422 aa9.01□□□□□ -0.97
CD44-205ENST00000352818 KATNAL1Q9BW62 490 aa9.01□□□□□ -0.97
CD44-205ENST00000352818 SRRTQ9BXP5 876 aaKnown RBP9.01□□□□□ -0.97
CD44-205ENST00000352818 TUFT1Q9NNX1 390 aa9.01□□□□□ -0.97
CD44-205ENST00000352818 CACNA2D2Q9NY47 1150 aa9.01□□□□□ -0.97
CD44-205ENST00000352818 TAB2Q9NYJ8 693 aa9.01□□□□□ -0.97
CD44-205ENST00000352818 FBXO4Q9UKT5 387 aa9.01□□□□□ -0.97
CD44-205ENST00000352818 CCPG1Q9ULG6 757 aa9.01□□□□□ -0.97
CD44-205ENST00000352818 ZNF462Q96JM2 2506 aa9.01□□□□□ -0.97
CD44-205ENST00000352818 CFAP46Q8IYW2 2715 aa9.01□□□□□ -0.97
CD44-205ENST00000352818 TBC1D4O60343 1298 aa9□□□□□ -0.97
CD44-205ENST00000352818 CAND2O75155 1236 aa9□□□□□ -0.97
CD44-205ENST00000352818 PSMD10O75832 226 aa9□□□□□ -0.97
CD44-205ENST00000352818 CFBP00751 764 aa9□□□□□ -0.97
CD44-205ENST00000352818 SPATA31C1P0DKV0 1188 aa9□□□□□ -0.97
CD44-205ENST00000352818 SRGAP2BP0DMP2 458 aa9□□□□□ -0.97
CD44-205ENST00000352818 HOXA13P31271 388 aaPredicted RBP9□□□□□ -0.97
CD44-205ENST00000352818 MGAT3Q09327 533 aa9□□□□□ -0.97
CD44-205ENST00000352818 SYCP1Q15431 976 aa9□□□□□ -0.97
CD44-205ENST00000352818 LPAL2Q16609 132 aa9□□□□□ -0.97
CD44-205ENST00000352818 CEP55Q53EZ4 464 aa9□□□□□ -0.97
CD44-205ENST00000352818 FIGNQ5HY92 759 aa9□□□□□ -0.97
CD44-205ENST00000352818 ANKRD40Q6AI12 368 aa9□□□□□ -0.97
CD44-205ENST00000352818 TSSK4Q6SA08 328 aa9□□□□□ -0.97
CD44-205ENST00000352818 B3GNT9Q6UX72 402 aa9□□□□□ -0.97
CD44-205ENST00000352818 PRR23CQ6ZRP0 262 aa9□□□□□ -0.97
CD44-205ENST00000352818 GPBP1Q86WP2 473 aa9□□□□□ -0.97
CD44-205ENST00000352818 ZC3H3Q8IXZ2 948 aaKnown RBP9□□□□□ -0.97
CD44-205ENST00000352818 SYT2Q8N9I0 419 aaPredicted RBP9□□□□□ -0.97
CD44-205ENST00000352818 ATRIPQ8WXE1 791 aa9□□□□□ -0.97
CD44-205ENST00000352818 CASP10Q92851 521 aa9□□□□□ -0.97
CD44-205ENST00000352818 BORCS6Q96GS4 357 aa9□□□□□ -0.97
CD44-205ENST00000352818 CNOT6LQ96LI5 555 aaKnown RBP9□□□□□ -0.97
CD44-205ENST00000352818 ERGIC2Q96RQ1 377 aa9□□□□□ -0.97
CD44-205ENST00000352818 TSG101Q99816 390 aa9□□□□□ -0.97
CD44-205ENST00000352818 RNPEPQ9H4A4 650 aa9□□□□□ -0.97
CD44-205ENST00000352818 SEMA4GQ9NTN9 838 aa9□□□□□ -0.97
CD44-205ENST00000352818 PANK4Q9NVE7 773 aa9□□□□□ -0.97
CD44-205ENST00000352818 ZSCAN32Q9NX65 697 aa9□□□□□ -0.97
CD44-205ENST00000352818 DDX41Q9UJV9 622 aaKnown RBP9□□□□□ -0.97
CD44-205ENST00000352818 DBR1Q9UK59 544 aaKnown RBP9□□□□□ -0.97
CD44-205ENST00000352818 KIAA1024Q9UPX6 916 aa9□□□□□ -0.97
CD44-205ENST00000352818 MAPK8IP1Q9UQF2 711 aa9□□□□□ -0.97
CD44-205ENST00000352818 PCDHA2Q9Y5H9 948 aa9□□□□□ -0.97
CD44-205ENST00000352818 PHLPP2Q6ZVD8 1323 aa9□□□□□ -0.97
CD44-205ENST00000352818 A0A1W2PQJ5 194 aa8.99□□□□□ -0.97
CD44-205ENST00000352818 C17orf102A2RUQ5 167 aa8.99□□□□□ -0.97
CD44-205ENST00000352818 E9PMD0 336 aa8.99□□□□□ -0.97
CD44-205ENST00000352818 MEIS1O00470 390 aa8.99□□□□□ -0.97
CD44-205ENST00000352818 CLASP2O75122 1294 aaKnown RBP8.99□□□□□ -0.97
CD44-205ENST00000352818 SMIM10L2AP0DMW4 78 aa8.99□□□□□ -0.97
CD44-205ENST00000352818 SMIM10L2BP0DMW5 78 aa8.99□□□□□ -0.97
CD44-205ENST00000352818 IDEP14735 1019 aa8.99□□□□□ -0.97
CD44-205ENST00000352818 ZNF76P36508 570 aa8.99□□□□□ -0.97
CD44-205ENST00000352818 ADKP55263 362 aaKnown RBP8.99□□□□□ -0.97
CD44-205ENST00000352818 RPS6P62753 249 aaKnown RBP8.99□□□□□ -0.97
CD44-205ENST00000352818 ADAM17P78536 824 aa8.99□□□□□ -0.97
CD44-205ENST00000352818 BMT2Q1RMZ1 405 aa8.99□□□□□ -0.97
CD44-205ENST00000352818 NCAPH2Q6IBW4 605 aa8.99□□□□□ -0.97
CD44-205ENST00000352818 PDE12Q6L8Q7 609 aaKnown RBP8.99□□□□□ -0.97
CD44-205ENST00000352818 XRRA1Q6P2D8 792 aa8.99□□□□□ -0.97
CD44-205ENST00000352818 LRRC55Q6ZSA7 311 aa8.99□□□□□ -0.97
CD44-205ENST00000352818 SEPT14Q6ZU15 432 aa8.99□□□□□ -0.97
CD44-205ENST00000352818 DYMQ7RTS9 669 aa8.99□□□□□ -0.97
CD44-205ENST00000352818 CATSPER3Q86XQ3 398 aa8.99□□□□□ -0.97
CD44-205ENST00000352818 REXO1L1PQ8IX06 675 aa8.99□□□□□ -0.97
CD44-205ENST00000352818 PPTC7Q8NI37 304 aa8.99□□□□□ -0.97
CD44-205ENST00000352818 KIF18AQ8NI77 898 aa8.99□□□□□ -0.97
CD44-205ENST00000352818 GPR152Q8TDT2 470 aa8.99□□□□□ -0.97
CD44-205ENST00000352818 GJA10Q969M2 543 aa8.99□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms