RNA–Protein interactions for RNA: ENST00000351808.9

IFT88-202, Transcript of intraflagellar transport 88, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene IFT88, Length 2,856 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT88-202ENST00000351808 USH1GQ495M9 461 aa14.08□□□□□ -0.16
IFT88-202ENST00000351808 C1orf228Q6PIY5 440 aa14.08□□□□□ -0.16
IFT88-202ENST00000351808 RFWD2Q8NHY2 731 aa14.08□□□□□ -0.16
IFT88-202ENST00000351808 RFFLQ8WZ73 363 aa14.08□□□□□ -0.16
IFT88-202ENST00000351808 STK33Q9BYT3 514 aa14.08□□□□□ -0.16
IFT88-202ENST00000351808 CYLDQ9NQC7 956 aa14.08□□□□□ -0.16
IFT88-202ENST00000351808 PPM1HQ9ULR3 514 aa14.08□□□□□ -0.16
IFT88-202ENST00000351808 TRAF3IP3Q9Y228 551 aa14.08□□□□□ -0.16
IFT88-202ENST00000351808 PDE5AO76074 875 aa14.08□□□□□ -0.16
IFT88-202ENST00000351808 CTNNA2P26232 953 aa14.08□□□□□ -0.16
IFT88-202ENST00000351808 PRKCIP41743 596 aa14.08□□□□□ -0.16
IFT88-202ENST00000351808 SERPINB8P50452 374 aa14.08□□□□□ -0.16
IFT88-202ENST00000351808 PDK4Q16654 411 aa14.08□□□□□ -0.16
IFT88-202ENST00000351808 LETM2Q2VYF4 491 aa14.08□□□□□ -0.16
IFT88-202ENST00000351808 DPY19L2P1Q6NXN4 242 aa14.08□□□□□ -0.16
IFT88-202ENST00000351808 CYFIP1Q7L576 1253 aa14.08□□□□□ -0.16
IFT88-202ENST00000351808 DENND1AQ8TEH3 1009 aa14.08□□□□□ -0.16
IFT88-202ENST00000351808 ARHGEF26Q96DR7 871 aa14.08□□□□□ -0.16
IFT88-202ENST00000351808 ZNF512BQ96KM6 892 aaPredicted RBP14.08□□□□□ -0.16
IFT88-202ENST00000351808 LGALS13Q9UHV8 139 aa14.08□□□□□ -0.16
IFT88-202ENST00000351808 MARF1Q9Y4F3 1742 aaKnown RBP14.08□□□□□ -0.16
IFT88-202ENST00000351808 TIAM2Q8IVF5 1701 aa14.07□□□□□ -0.16
IFT88-202ENST00000351808 A0A0G2JND7 137 aa14.07□□□□□ -0.16
IFT88-202ENST00000351808 RGL2O15211 777 aa14.07□□□□□ -0.16
IFT88-202ENST00000351808 TOM1O60784 492 aa14.07□□□□□ -0.16
IFT88-202ENST00000351808 ESRRAP11474 423 aaPredicted RBP14.07□□□□□ -0.16
IFT88-202ENST00000351808 PCSK6P29122 969 aa14.07□□□□□ -0.16
IFT88-202ENST00000351808 CCR3P51677 355 aa14.07□□□□□ -0.16
IFT88-202ENST00000351808 COG7P83436 770 aa14.07□□□□□ -0.16
IFT88-202ENST00000351808 GRB10Q13322 594 aa14.07□□□□□ -0.16
IFT88-202ENST00000351808 GJB7Q6PEY0 223 aa14.07□□□□□ -0.16
IFT88-202ENST00000351808 NANOGNBQ7Z5D8 188 aa14.07□□□□□ -0.16
IFT88-202ENST00000351808 GLYCTKQ8IVS8 523 aa14.07□□□□□ -0.16
IFT88-202ENST00000351808 LNX1Q8TBB1 728 aaPredicted RBP14.07□□□□□ -0.16
IFT88-202ENST00000351808 FNDC8Q8TC99 324 aa14.07□□□□□ -0.16
IFT88-202ENST00000351808 LARP4BQ92615 738 aaKnown RBP14.07□□□□□ -0.16
IFT88-202ENST00000351808 DDX12PQ92771 950 aa14.07□□□□□ -0.16
IFT88-202ENST00000351808 SPZ1Q9BXG8 430 aa14.07□□□□□ -0.16
IFT88-202ENST00000351808 FGFBP2Q9BYJ0 223 aa14.07□□□□□ -0.16
IFT88-202ENST00000351808 EPB41L1Q9H4G0 881 aa14.07□□□□□ -0.16
IFT88-202ENST00000351808 FBXO6Q9NRD1 293 aaPredicted RBP14.07□□□□□ -0.16
IFT88-202ENST00000351808 FAIMQ9NVQ4 179 aa14.07□□□□□ -0.16
IFT88-202ENST00000351808 LTN1O94822 1766 aa14.07□□□□□ -0.16
IFT88-202ENST00000351808 LSM1O15116 133 aaKnown RBP14.07□□□□□ -0.16
IFT88-202ENST00000351808 GRM2Q14416 872 aa14.07□□□□□ -0.16
IFT88-202ENST00000351808 SLC1A5Q15758 541 aa14.07□□□□□ -0.16
IFT88-202ENST00000351808 SFT2D3Q587I9 215 aa14.07□□□□□ -0.16
IFT88-202ENST00000351808 ZNF362Q5T0B9 420 aaPredicted RBP14.07□□□□□ -0.16
IFT88-202ENST00000351808 OR6Y1Q8NGX8 325 aa14.07□□□□□ -0.16
IFT88-202ENST00000351808 RIN3Q8TB24 985 aa14.07□□□□□ -0.16
IFT88-202ENST00000351808 FAM89AQ96GI7 184 aa14.07□□□□□ -0.16
IFT88-202ENST00000351808 SRPK1Q96SB4 655 aaKnown RBP14.07□□□□□ -0.16
IFT88-202ENST00000351808 TUT1Q9H6E5 874 aaKnown RBP14.07□□□□□ -0.16
IFT88-202ENST00000351808 TIMMDC1Q9NPL8 285 aa14.07□□□□□ -0.16
IFT88-202ENST00000351808 CNNM1Q9NRU3 951 aa14.07□□□□□ -0.16
IFT88-202ENST00000351808 NINJ2Q9NZG7 142 aa14.07□□□□□ -0.16
IFT88-202ENST00000351808 RIC1Q4ADV7 1423 aa14.07□□□□□ -0.16
IFT88-202ENST00000351808 DIP2BQ9P265 1576 aa14.07□□□□□ -0.16
IFT88-202ENST00000351808 SIPA1L3O60292 1781 aaPredicted RBP14.06□□□□□ -0.16
IFT88-202ENST00000351808 SLIT3O75094 1523 aa14.06□□□□□ -0.16
IFT88-202ENST00000351808 LAD1O00515 517 aa14.06□□□□□ -0.16
IFT88-202ENST00000351808 CCNT1O60563 726 aaKnown RBP14.06□□□□□ -0.16
IFT88-202ENST00000351808 CAPN15O75808 1086 aa14.06□□□□□ -0.16
IFT88-202ENST00000351808 DDAH1O94760 285 aa14.06□□□□□ -0.16
IFT88-202ENST00000351808 RPA3P35244 121 aaPredicted RBP14.06□□□□□ -0.16
IFT88-202ENST00000351808 AP2B1P63010 937 aa14.06□□□□□ -0.16
IFT88-202ENST00000351808 TBL3Q12788 808 aaKnown RBP14.06□□□□□ -0.16
IFT88-202ENST00000351808 DLG1Q12959 904 aa14.06□□□□□ -0.16
IFT88-202ENST00000351808 CC2D2BQ6DHV5 1058 aa14.06□□□□□ -0.16
IFT88-202ENST00000351808 RIPOR1Q6ZS17 1223 aa14.06□□□□□ -0.16
IFT88-202ENST00000351808 RGS9BPQ6ZS82 235 aa14.06□□□□□ -0.16
IFT88-202ENST00000351808 ZBED8Q8IZ13 594 aa14.06□□□□□ -0.16
IFT88-202ENST00000351808 C4orf33Q8N1A6 199 aa14.06□□□□□ -0.16
IFT88-202ENST00000351808 CLPTM1LQ96KA5 538 aa14.06□□□□□ -0.16
IFT88-202ENST00000351808 PRICKLE1Q96MT3 831 aaPredicted RBP14.06□□□□□ -0.16
IFT88-202ENST00000351808 ALG6Q9Y672 507 aa14.06□□□□□ -0.16
IFT88-202ENST00000351808 WDR91A4D1P6 747 aa14.06□□□□□ -0.16
IFT88-202ENST00000351808 M0R2N6 131 aa14.06□□□□□ -0.16
IFT88-202ENST00000351808 BUD23O43709 281 aaKnown RBP14.06□□□□□ -0.16
IFT88-202ENST00000351808 HALP42357 657 aa14.06□□□□□ -0.16
IFT88-202ENST00000351808 ZBTB16Q05516 673 aa14.06□□□□□ -0.16
IFT88-202ENST00000351808 HNRNPDQ14103 355 aaKnown RBP14.06□□□□□ -0.16
IFT88-202ENST00000351808 FYB2Q5VWT5 728 aa14.06□□□□□ -0.16
IFT88-202ENST00000351808 LRRC6Q86X45 466 aa14.06□□□□□ -0.16
IFT88-202ENST00000351808 SLC25A41Q8N5S1 370 aa14.06□□□□□ -0.16
IFT88-202ENST00000351808 SYT2Q8N9I0 419 aaPredicted RBP14.06□□□□□ -0.16
IFT88-202ENST00000351808 SPATA5Q8NB90 893 aa14.06□□□□□ -0.16
IFT88-202ENST00000351808 ZNF75CPQ92670 426 aaPredicted RBP14.06□□□□□ -0.16
IFT88-202ENST00000351808 ADAM33Q9BZ11 813 aa14.06□□□□□ -0.16
IFT88-202ENST00000351808 ACTL7BQ9Y614 415 aa14.06□□□□□ -0.16
IFT88-202ENST00000351808 SYNGAP1Q96PV0 1343 aa14.06□□□□□ -0.16
IFT88-202ENST00000351808 TXNDC9O14530 226 aa14.05□□□□□ -0.16
IFT88-202ENST00000351808 TCEA3O75764 348 aa14.05□□□□□ -0.16
IFT88-202ENST00000351808 COL6A2P12110 1019 aa14.05□□□□□ -0.16
IFT88-202ENST00000351808 PON1P27169 355 aa14.05□□□□□ -0.16
IFT88-202ENST00000351808 PSMD7P51665 324 aa14.05□□□□□ -0.16
IFT88-202ENST00000351808 TRIP13Q15645 432 aaPredicted RBP14.05□□□□□ -0.16
IFT88-202ENST00000351808 PDSS2Q86YH6 399 aa14.05□□□□□ -0.16
IFT88-202ENST00000351808 HELBQ8NG08 1087 aaPredicted RBP14.05□□□□□ -0.16
IFT88-202ENST00000351808 MAML1Q92585 1016 aa14.05□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms