RNA–Protein interactions for RNA: ENST00000351677.6

PTPN11-201, Transcript of protein tyrosine phosphatase, non-receptor type 11, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PTPN11, Length 6,101 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN11-201ENST00000351677 APOL1O14791 398 aa16.94■□□□□ 0.3
PTPN11-201ENST00000351677 EEF1B2P24534 225 aaKnown RBP16.94■□□□□ 0.3
PTPN11-201ENST00000351677 FOXD4Q12950 439 aaPredicted RBP16.94■□□□□ 0.3
PTPN11-201ENST00000351677 C1orf146Q5VVC0 180 aa16.94■□□□□ 0.3
PTPN11-201ENST00000351677 PRAMEF18Q5VWM3 479 aa16.94■□□□□ 0.3
PTPN11-201ENST00000351677 DDX42Q86XP3 938 aaKnown RBP eCLIP16.94■□□□□ 0.3
PTPN11-201ENST00000351677 AGBL1Q96MI9 1066 aa16.94■□□□□ 0.3
PTPN11-201ENST00000351677 ACAP3Q96P50 834 aa16.94■□□□□ 0.3
PTPN11-201ENST00000351677 UVRAGQ9P2Y5 699 aa16.94■□□□□ 0.3
PTPN11-201ENST00000351677 PPP1R37O75864 691 aa16.94■□□□□ 0.3
PTPN11-201ENST00000351677 NR3C2P08235 984 aa16.94■□□□□ 0.3
PTPN11-201ENST00000351677 ATXN8OSP0DMR3 200 aa16.94■□□□□ 0.3
PTPN11-201ENST00000351677 VPS72Q15906 364 aa16.94■□□□□ 0.3
PTPN11-201ENST00000351677 REXO1L1PQ8IX06 675 aa16.94■□□□□ 0.3
PTPN11-201ENST00000351677 C18orf8Q96DM3 657 aa16.94■□□□□ 0.3
PTPN11-201ENST00000351677 CELF4Q9BZC1 486 aaKnown RBP16.94■□□□□ 0.3
PTPN11-201ENST00000351677 AGAP1Q9UPQ3 857 aa16.94■□□□□ 0.3
PTPN11-201ENST00000351677 CARSP49589 748 aaKnown RBP16.94■□□□□ 0.3
PTPN11-201ENST00000351677 RGS7P49802 495 aa16.94■□□□□ 0.3
PTPN11-201ENST00000351677 PHEXP78562 749 aa16.94■□□□□ 0.3
PTPN11-201ENST00000351677 INTS5Q6P9B9 1019 aaKnown RBP16.94■□□□□ 0.3
PTPN11-201ENST00000351677 LCA5Q86VQ0 697 aa16.94■□□□□ 0.3
PTPN11-201ENST00000351677 MCEEQ96PE7 176 aa16.94■□□□□ 0.3
PTPN11-201ENST00000351677 TEX13BQ9BXU2 312 aa16.94■□□□□ 0.3
PTPN11-201ENST00000351677 KIAA1210Q9ULL0 1709 aa16.94■□□□□ 0.3
PTPN11-201ENST00000351677 FSCBQ5H9T9 825 aa16.93■□□□□ 0.3
PTPN11-201ENST00000351677 KLHDC7AQ5VTJ3 777 aa16.93■□□□□ 0.3
PTPN11-201ENST00000351677 ACAD11Q709F0 780 aa16.93■□□□□ 0.3
PTPN11-201ENST00000351677 RBBP8NLQ8NC74 664 aaPredicted RBP16.93■□□□□ 0.3
PTPN11-201ENST00000351677 LPAR1Q92633 364 aa16.93■□□□□ 0.3
PTPN11-201ENST00000351677 CCDC138Q96M89 665 aa16.93■□□□□ 0.3
PTPN11-201ENST00000351677 VIPAS39Q9H9C1 493 aa16.93■□□□□ 0.3
PTPN11-201ENST00000351677 THEGQ9P2T0 379 aa16.93■□□□□ 0.3
PTPN11-201ENST00000351677 CFAP69A5D8W1 941 aa16.93■□□□□ 0.3
PTPN11-201ENST00000351677 ERVK-24P63145 666 aa16.93■□□□□ 0.3
PTPN11-201ENST00000351677 ELOA2Q8IYF1 753 aaPredicted RBP16.93■□□□□ 0.3
PTPN11-201ENST00000351677 MXRA8Q9BRK3 442 aa16.93■□□□□ 0.3
PTPN11-201ENST00000351677 PI4K2AQ9BTU6 479 aa16.93■□□□□ 0.3
PTPN11-201ENST00000351677 UPF3AQ9H1J1 476 aaKnown RBP16.93■□□□□ 0.3
PTPN11-201ENST00000351677 EIF2AK3Q9NZJ5 1116 aaKnown RBP16.93■□□□□ 0.3
PTPN11-201ENST00000351677 EHD2Q9NZN4 543 aa16.93■□□□□ 0.3
PTPN11-201ENST00000351677 KDM6AO15550 1401 aaPredicted RBP16.93■□□□□ 0.3
PTPN11-201ENST00000351677 CHUKO15111 745 aa16.93■□□□□ 0.3
PTPN11-201ENST00000351677 KCNN4O15554 427 aa16.93■□□□□ 0.3
PTPN11-201ENST00000351677 ESRRGP62508 458 aa16.93■□□□□ 0.3
PTPN11-201ENST00000351677 EPC2Q52LR7 807 aa16.93■□□□□ 0.3
PTPN11-201ENST00000351677 LRRC31Q6UY01 552 aa16.93■□□□□ 0.3
PTPN11-201ENST00000351677 TMEM39BQ9GZU3 492 aa16.93■□□□□ 0.3
PTPN11-201ENST00000351677 CNOT7Q9UIV1 285 aaKnown RBP16.93■□□□□ 0.3
PTPN11-201ENST00000351677 COMTP21964 271 aa16.93■□□□□ 0.3
PTPN11-201ENST00000351677 DRP2Q13474 957 aa16.93■□□□□ 0.3
PTPN11-201ENST00000351677 RCOR2Q8IZ40 523 aa16.93■□□□□ 0.3
PTPN11-201ENST00000351677 RMDN2Q96LZ7 410 aa16.93■□□□□ 0.3
PTPN11-201ENST00000351677 SENP7Q9BQF6 1050 aa16.93■□□□□ 0.3
PTPN11-201ENST00000351677 LMNAP02545 664 aaKnown RBP16.93■□□□□ 0.3
PTPN11-201ENST00000351677 CHN1P15882 459 aa16.93■□□□□ 0.3
PTPN11-201ENST00000351677 CDR2Q01850 454 aa16.93■□□□□ 0.3
PTPN11-201ENST00000351677 GRB10Q13322 594 aa16.93■□□□□ 0.3
PTPN11-201ENST00000351677 RFX8Q6ZV50 586 aa16.93■□□□□ 0.3
PTPN11-201ENST00000351677 AGR3Q8TD06 166 aa16.93■□□□□ 0.3
PTPN11-201ENST00000351677 AFG1LQ8WV93 481 aa16.93■□□□□ 0.3
PTPN11-201ENST00000351677 C9orf72Q96LT7 481 aa16.93■□□□□ 0.3
PTPN11-201ENST00000351677 KCND2Q9NZV8 630 aa16.93■□□□□ 0.3
PTPN11-201ENST00000351677 KRT10P13645 584 aa16.92■□□□□ 0.3
PTPN11-201ENST00000351677 STAT4Q14765 748 aa16.92■□□□□ 0.3
PTPN11-201ENST00000351677 EMC2Q15006 297 aa16.92■□□□□ 0.3
PTPN11-201ENST00000351677 SLC10A5Q5PT55 438 aa16.92■□□□□ 0.3
PTPN11-201ENST00000351677 PRKCEQ02156 737 aa16.92■□□□□ 0.3
PTPN11-201ENST00000351677 PID1Q7Z2X4 250 aa16.92■□□□□ 0.3
PTPN11-201ENST00000351677 RNF135Q8IUD6 432 aa16.92■□□□□ 0.3
PTPN11-201ENST00000351677 RAPGEF5Q92565 580 aa16.92■□□□□ 0.3
PTPN11-201ENST00000351677 TRABDQ9H4I3 376 aa16.92■□□□□ 0.3
PTPN11-201ENST00000351677 ITSN1Q15811 1721 aa16.92■□□□□ 0.3
PTPN11-201ENST00000351677 SCG3Q8WXD2 468 aaKnown RBP16.92■□□□□ 0.3
PTPN11-201ENST00000351677 BFARQ9NZS9 450 aa16.92■□□□□ 0.3
PTPN11-201ENST00000351677 POLIQ9UNA4 740 aa16.92■□□□□ 0.3
PTPN11-201ENST00000351677 H3BRJ5 948 aa16.92■□□□□ 0.3
PTPN11-201ENST00000351677 ATP9BO43861 1147 aa16.92■□□□□ 0.3
PTPN11-201ENST00000351677 BYSLQ13895 437 aaKnown RBP16.92■□□□□ 0.3
PTPN11-201ENST00000351677 ARHGEF6Q15052 776 aa16.92■□□□□ 0.3
PTPN11-201ENST00000351677 RGS9BPQ6ZS82 235 aa16.92■□□□□ 0.3
PTPN11-201ENST00000351677 FAM161BQ96MY7 647 aa16.92■□□□□ 0.3
PTPN11-201ENST00000351677 ERGIC2Q96RQ1 377 aa16.92■□□□□ 0.3
PTPN11-201ENST00000351677 RBM15Q96T37 977 aaKnown RBP eCLIP16.92■□□□□ 0.3
PTPN11-201ENST00000351677 EPN3Q9H201 632 aa16.92■□□□□ 0.3
PTPN11-201ENST00000351677 KRT82Q9NSB4 513 aa16.92■□□□□ 0.3
PTPN11-201ENST00000351677 APOEP02649 317 aa16.92■□□□□ 0.3
PTPN11-201ENST00000351677 TYK2P29597 1187 aa16.92■□□□□ 0.3
PTPN11-201ENST00000351677 NBPF9Q3BBW0 867 aa16.92■□□□□ 0.3
PTPN11-201ENST00000351677 FRA10AC1Q70Z53 315 aa16.92■□□□□ 0.3
PTPN11-201ENST00000351677 ZNF280CQ8ND82 737 aa16.92■□□□□ 0.3
PTPN11-201ENST00000351677 SUDS3Q9H7L9 328 aaPredicted RBP16.92■□□□□ 0.3
PTPN11-201ENST00000351677 HACD3Q9P035 362 aa16.92■□□□□ 0.3
PTPN11-201ENST00000351677 DIP2BQ9P265 1576 aa16.91■□□□□ 0.3
PTPN11-201ENST00000351677 EIF4E1BA6NMX2 242 aaKnown RBP16.91■□□□□ 0.3
PTPN11-201ENST00000351677 EIF3DO15371 548 aaKnown RBP eCLIP16.91■□□□□ 0.3
PTPN11-201ENST00000351677 COPB2P35606 906 aa16.91■□□□□ 0.3
PTPN11-201ENST00000351677 NPEPPSP55786 919 aa16.91■□□□□ 0.3
PTPN11-201ENST00000351677 TTC39CQ8N584 583 aa16.91■□□□□ 0.3
PTPN11-201ENST00000351677 CXorf38Q8TB03 319 aa16.91■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms