RNA–Protein interactions for RNA: ENST00000347968.7

MBD1-204, Transcript of methyl-CpG binding domain protein 1, humanhuman

TSL 1 (best) BASIC

Gene MBD1, Length 3,091 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-204ENST00000347968 TRIM50Q86XT4 487 aa17.26■□□□□ 0.35
MBD1-204ENST00000347968 ZBTB38Q8NAP3 1195 aaPredicted RBP17.26■□□□□ 0.35
MBD1-204ENST00000347968 LARP4BQ92615 738 aaKnown RBP17.26■□□□□ 0.35
MBD1-204ENST00000347968 BTBD10Q9BSF8 475 aa17.26■□□□□ 0.35
MBD1-204ENST00000347968 BRD8Q9H0E9 1235 aa17.26■□□□□ 0.35
MBD1-204ENST00000347968 SH3GLB1Q9Y371 365 aa17.26■□□□□ 0.35
MBD1-204ENST00000347968 PCDHA3Q9Y5H8 950 aa17.26■□□□□ 0.35
MBD1-204ENST00000347968 HEY1Q9Y5J3 304 aa17.26■□□□□ 0.35
MBD1-204ENST00000347968 GMEB1Q9Y692 573 aa17.26■□□□□ 0.35
MBD1-204ENST00000347968 SPEF2Q9C093 1822 aa17.25■□□□□ 0.35
MBD1-204ENST00000347968 POTEJP0CG39 1038 aa17.25■□□□□ 0.35
MBD1-204ENST00000347968 GOLGA8HP0CJ92 632 aa17.25■□□□□ 0.35
MBD1-204ENST00000347968 DLATP10515 647 aaKnown RBP17.25■□□□□ 0.35
MBD1-204ENST00000347968 VCAM1P19320 739 aa17.25■□□□□ 0.35
MBD1-204ENST00000347968 COG7P83436 770 aa17.25■□□□□ 0.35
MBD1-204ENST00000347968 ZBTB16Q05516 673 aa17.25■□□□□ 0.35
MBD1-204ENST00000347968 TRIM59Q8IWR1 403 aa17.25■□□□□ 0.35
MBD1-204ENST00000347968 ATG4AQ8WYN0 398 aa17.25■□□□□ 0.35
MBD1-204ENST00000347968 HEY2Q9UBP5 337 aa17.25■□□□□ 0.35
MBD1-204ENST00000347968 DOLKQ9UPQ8 538 aa17.25■□□□□ 0.35
MBD1-204ENST00000347968 NRAPQ86VF7 1730 aa17.25■□□□□ 0.35
MBD1-204ENST00000347968 ATRNO75882 1429 aa17.25■□□□□ 0.35
MBD1-204ENST00000347968 RPA3P35244 121 aaPredicted RBP17.25■□□□□ 0.35
MBD1-204ENST00000347968 MLH1P40692 756 aa17.25■□□□□ 0.35
MBD1-204ENST00000347968 SLC1A5Q15758 541 aa17.25■□□□□ 0.35
MBD1-204ENST00000347968 ZYXQ15942 572 aaKnown RBP17.25■□□□□ 0.35
MBD1-204ENST00000347968 LPCAT4Q643R3 524 aa17.25■□□□□ 0.35
MBD1-204ENST00000347968 MXD3Q9BW11 206 aa17.25■□□□□ 0.35
MBD1-204ENST00000347968 CDCA7Q9BWT1 371 aaPredicted RBP17.25■□□□□ 0.35
MBD1-204ENST00000347968 OXCT2Q9BYC2 517 aaPredicted RBP17.25■□□□□ 0.35
MBD1-204ENST00000347968 TAS2R1Q9NYW7 299 aa17.25■□□□□ 0.35
MBD1-204ENST00000347968 STARD13Q9Y3M8 1113 aa17.25■□□□□ 0.35
MBD1-204ENST00000347968 UMODL1Q5DID0 1318 aa17.25■□□□□ 0.35
MBD1-204ENST00000347968 FAM47DPA6NHR8 397 aa17.24■□□□□ 0.35
MBD1-204ENST00000347968 ATP6V1B1P15313 513 aa17.24■□□□□ 0.35
MBD1-204ENST00000347968 CA8P35219 290 aa17.24■□□□□ 0.35
MBD1-204ENST00000347968 BCAMP50895 628 aa17.24■□□□□ 0.35
MBD1-204ENST00000347968 CTC1Q2NKJ3 1217 aa17.24■□□□□ 0.35
MBD1-204ENST00000347968 ZNF653Q96CK0 615 aa17.24■□□□□ 0.35
MBD1-204ENST00000347968 GRAMD1AQ96CP6 724 aa17.24■□□□□ 0.35
MBD1-204ENST00000347968 BTBD6Q96KE9 485 aa17.24■□□□□ 0.35
MBD1-204ENST00000347968 PNMA5Q96PV4 448 aa17.24■□□□□ 0.35
MBD1-204ENST00000347968 ROPN1BQ9BZX4 212 aaPredicted RBP17.24■□□□□ 0.35
MBD1-204ENST00000347968 ROPN1Q9HAT0 212 aaPredicted RBP17.24■□□□□ 0.35
MBD1-204ENST00000347968 AKAP11Q9UKA4 1901 aa17.24■□□□□ 0.35
MBD1-204ENST00000347968 GSTTP1A0A1W2PQM5 241 aa17.24■□□□□ 0.35
MBD1-204ENST00000347968 CDK4P11802 303 aa17.24■□□□□ 0.35
MBD1-204ENST00000347968 ANPEPP15144 967 aa17.24■□□□□ 0.35
MBD1-204ENST00000347968 POLD1P28340 1107 aa17.24■□□□□ 0.35
MBD1-204ENST00000347968 SH2D4BQ5SQS7 431 aa17.24■□□□□ 0.35
MBD1-204ENST00000347968 CROCCP2Q86T23 111 aa17.24■□□□□ 0.35
MBD1-204ENST00000347968 ART4Q93070 314 aa17.24■□□□□ 0.35
MBD1-204ENST00000347968 NR1H4Q96RI1 486 aaPredicted RBP17.24■□□□□ 0.35
MBD1-204ENST00000347968 METTL14Q9HCE5 456 aaKnown RBP17.24■□□□□ 0.35
MBD1-204ENST00000347968 SLIT2O94813 1529 aa17.24■□□□□ 0.35
MBD1-204ENST00000347968 BTNL10A8MVZ5 291 aa17.24■□□□□ 0.35
MBD1-204ENST00000347968 CCDC22O60826 627 aa17.24■□□□□ 0.35
MBD1-204ENST00000347968 EDF1O60869 148 aaKnown RBP17.24■□□□□ 0.35
MBD1-204ENST00000347968 HAUS5O94927 633 aa17.24■□□□□ 0.35
MBD1-204ENST00000347968 ASMTLO95671 621 aa17.24■□□□□ 0.35
MBD1-204ENST00000347968 PCSK6P29122 969 aa17.24■□□□□ 0.35
MBD1-204ENST00000347968 PGM1P36871 562 aa17.24■□□□□ 0.35
MBD1-204ENST00000347968 HIPK4Q8NE63 616 aa17.24■□□□□ 0.35
MBD1-204ENST00000347968 RUNDC3BQ96NL0 473 aa17.24■□□□□ 0.35
MBD1-204ENST00000347968 SRPK1Q96SB4 655 aaKnown RBP17.24■□□□□ 0.35
MBD1-204ENST00000347968 KANSL3Q9P2N6 904 aa17.24■□□□□ 0.35
MBD1-204ENST00000347968 HDAC9Q9UKV0 1011 aa17.24■□□□□ 0.35
MBD1-204ENST00000347968 TTLL1O95922 423 aa17.23■□□□□ 0.35
MBD1-204ENST00000347968 CA4P22748 312 aa17.23■□□□□ 0.35
MBD1-204ENST00000347968 CALML3P27482 149 aa17.23■□□□□ 0.35
MBD1-204ENST00000347968 HIRAP54198 1017 aaPredicted RBP17.23■□□□□ 0.35
MBD1-204ENST00000347968 COASYQ13057 564 aa17.23■□□□□ 0.35
MBD1-204ENST00000347968 RASSF3Q86WH2 238 aa17.23■□□□□ 0.35
MBD1-204ENST00000347968 SLF2Q8IX21 1173 aa17.23■□□□□ 0.35
MBD1-204ENST00000347968 NME8Q8N427 588 aa17.23■□□□□ 0.35
MBD1-204ENST00000347968 STKLD1Q8NE28 680 aa17.23■□□□□ 0.35
MBD1-204ENST00000347968 CTNNBL1Q8WYA6 563 aaPredicted RBP17.23■□□□□ 0.35
MBD1-204ENST00000347968 OLFM3Q96PB7 478 aa17.23■□□□□ 0.35
MBD1-204ENST00000347968 UTP3Q9NQZ2 479 aaKnown RBP eCLIP17.23■□□□□ 0.356e-7■■■■■ 205.9
MBD1-204ENST00000347968 ALG6Q9Y672 507 aa17.23■□□□□ 0.35
MBD1-204ENST00000347968 MESDQ14696 234 aa17.23■□□□□ 0.35
MBD1-204ENST00000347968 GSTA3Q16772 222 aa17.23■□□□□ 0.35
MBD1-204ENST00000347968 TREML1Q86YW5 311 aa17.23■□□□□ 0.35
MBD1-204ENST00000347968 CATSPER2Q96P56 530 aa17.23■□□□□ 0.35
MBD1-204ENST00000347968 TAOK3Q9H2K8 898 aa17.23■□□□□ 0.35
MBD1-204ENST00000347968 NINJ2Q9NZG7 142 aa17.23■□□□□ 0.35
MBD1-204ENST00000347968 USP21Q9UK80 565 aa17.23■□□□□ 0.35
MBD1-204ENST00000347968 TP73O15350 636 aa17.22■□□□□ 0.35
MBD1-204ENST00000347968 PDE8BO95263 885 aa17.22■□□□□ 0.35
MBD1-204ENST00000347968 PABPC4LP0CB38 370 aaKnown RBP17.22■□□□□ 0.35
MBD1-204ENST00000347968 PON1P27169 355 aa17.22■□□□□ 0.35
MBD1-204ENST00000347968 ATP5DP30049 168 aa17.22■□□□□ 0.35
MBD1-204ENST00000347968 IL6STP40189 918 aaPredicted RBP17.22■□□□□ 0.35
MBD1-204ENST00000347968 PSMD7P51665 324 aa17.22■□□□□ 0.35
MBD1-204ENST00000347968 DLG1Q12959 904 aa17.22■□□□□ 0.35
MBD1-204ENST00000347968 SYDE2Q5VT97 1194 aa17.22■□□□□ 0.35
MBD1-204ENST00000347968 PPP1R21Q6ZMI0 780 aa17.22■□□□□ 0.35
MBD1-204ENST00000347968 SLC15A3Q8IY34 581 aa17.22■□□□□ 0.35
MBD1-204ENST00000347968 MIS12Q9H081 205 aa17.22■□□□□ 0.35
MBD1-204ENST00000347968 ACP6Q9NPH0 428 aa17.22■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 62.7 ms