RNA–Protein interactions for RNA: ENST00000346569.6

ECM1-201, Transcript of extracellular matrix protein 1, humanhuman

TSL 1 (best) BASIC

Gene ECM1, Length 1,444 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECM1-201ENST00000346569 MEFVO15553 781 aaPredicted RBP11.88□□□□□ -0.51
ECM1-201ENST00000346569 NDUFA10O95299 355 aa11.88□□□□□ -0.51
ECM1-201ENST00000346569 VNN1O95497 513 aa11.88□□□□□ -0.51
ECM1-201ENST00000346569 CLTAP09496 248 aa11.88□□□□□ -0.51
ECM1-201ENST00000346569 HARSP12081 509 aaKnown RBP11.88□□□□□ -0.51
ECM1-201ENST00000346569 TNNI1P19237 187 aa11.88□□□□□ -0.51
ECM1-201ENST00000346569 FGFR4P22455 802 aa11.88□□□□□ -0.51
ECM1-201ENST00000346569 AXLP30530 894 aa11.88□□□□□ -0.51
ECM1-201ENST00000346569 PRKCIP41743 596 aa11.88□□□□□ -0.51
ECM1-201ENST00000346569 ACLYP53396 1101 aa11.88□□□□□ -0.51
ECM1-201ENST00000346569 AP3M2P53677 418 aa11.88□□□□□ -0.51
ECM1-201ENST00000346569 PTPN11Q06124 597 aaPredicted RBP11.88□□□□□ -0.51
ECM1-201ENST00000346569 SNX17Q15036 470 aa11.88□□□□□ -0.51
ECM1-201ENST00000346569 ENOX2Q16206 610 aaKnown RBP11.88□□□□□ -0.51
ECM1-201ENST00000346569 LMBRD2Q68DH5 695 aaPredicted RBP11.88□□□□□ -0.51
ECM1-201ENST00000346569 SERINC5Q86VE9 423 aa11.88□□□□□ -0.51
ECM1-201ENST00000346569 TMEM192Q8IY95 271 aa11.88□□□□□ -0.51
ECM1-201ENST00000346569 THNSL1Q8IYQ7 743 aa11.88□□□□□ -0.51
ECM1-201ENST00000346569 SLC43A3Q8NBI5 491 aa11.88□□□□□ -0.51
ECM1-201ENST00000346569 TMEM40Q8WWA1 233 aa11.88□□□□□ -0.51
ECM1-201ENST00000346569 VTI1AQ96AJ9 217 aa11.88□□□□□ -0.51
ECM1-201ENST00000346569 CELF4Q9BZC1 486 aaKnown RBP11.88□□□□□ -0.51
ECM1-201ENST00000346569 GPR88Q9GZN0 384 aa11.88□□□□□ -0.51
ECM1-201ENST00000346569 PTPN22Q9Y2R2 807 aa11.88□□□□□ -0.51
ECM1-201ENST00000346569 MOXD2PA6NHM9 499 aa11.87□□□□□ -0.51
ECM1-201ENST00000346569 EIF3CLB5ME19 914 aaKnown RBP11.87□□□□□ -0.51
ECM1-201ENST00000346569 CCP110O43303 1012 aa11.87□□□□□ -0.51
ECM1-201ENST00000346569 ZSCAN12O43309 604 aa11.87□□□□□ -0.51
ECM1-201ENST00000346569 ERLIN2O94905 339 aa11.87□□□□□ -0.51
ECM1-201ENST00000346569 LCA5LO95447 670 aa11.87□□□□□ -0.51
ECM1-201ENST00000346569 SERPING1P05155 500 aa11.87□□□□□ -0.51
ECM1-201ENST00000346569 RPLP2P05387 115 aaKnown RBP11.87□□□□□ -0.51
ECM1-201ENST00000346569 PLEKP08567 350 aaPredicted RBP11.87□□□□□ -0.51
ECM1-201ENST00000346569 STAG3L1P0CL83 205 aa11.87□□□□□ -0.51
ECM1-201ENST00000346569 RFX1P22670 979 aa11.87□□□□□ -0.51
ECM1-201ENST00000346569 EIF4A3P38919 411 aaKnown RBP11.87□□□□□ -0.51
ECM1-201ENST00000346569 ITGA7Q13683 1181 aa11.87□□□□□ -0.51
ECM1-201ENST00000346569 DRAP1Q14919 205 aaPredicted RBP11.87□□□□□ -0.51
ECM1-201ENST00000346569 KYAT1Q16773 422 aa11.87□□□□□ -0.51
ECM1-201ENST00000346569 TDRD10Q5VZ19 366 aaKnown RBP11.87□□□□□ -0.51
ECM1-201ENST00000346569 NYAP1Q6ZVC0 841 aa11.87□□□□□ -0.51
ECM1-201ENST00000346569 CATSPER4Q7RTX7 472 aa11.87□□□□□ -0.51
ECM1-201ENST00000346569 WDR49Q8IV35 697 aa11.87□□□□□ -0.51
ECM1-201ENST00000346569 ARHGEF19Q8IW93 802 aa11.87□□□□□ -0.51
ECM1-201ENST00000346569 OR5B17Q8NGF7 314 aa11.87□□□□□ -0.51
ECM1-201ENST00000346569 HELQQ8TDG4 1101 aa11.87□□□□□ -0.51
ECM1-201ENST00000346569 TATDN2Q93075 761 aa11.87□□□□□ -0.51
ECM1-201ENST00000346569 WNT8BQ93098 351 aa11.87□□□□□ -0.51
ECM1-201ENST00000346569 FAM84AQ96KN4 292 aa11.87□□□□□ -0.51
ECM1-201ENST00000346569 PPP1R13BQ96KQ4 1090 aa11.87□□□□□ -0.51
ECM1-201ENST00000346569 SCLT1Q96NL6 688 aa11.87□□□□□ -0.51
ECM1-201ENST00000346569 SPAG5Q96R06 1193 aa11.87□□□□□ -0.51
ECM1-201ENST00000346569 EIF3CQ99613 913 aaKnown RBP11.87□□□□□ -0.51
ECM1-201ENST00000346569 UBE2TQ9NPD8 197 aaPredicted RBP11.87□□□□□ -0.51
ECM1-201ENST00000346569 REXO2Q9Y3B8 237 aaKnown RBP11.87□□□□□ -0.51
ECM1-201ENST00000346569 LACTBL1A8MY62 500 aa11.86□□□□□ -0.51
ECM1-201ENST00000346569 FOXN3O00409 490 aaPredicted RBP11.86□□□□□ -0.51
ECM1-201ENST00000346569 ZNF263O14978 683 aa11.86□□□□□ -0.51
ECM1-201ENST00000346569 ZC3H11AO75152 810 aaKnown RBP eCLIP11.86□□□□□ -0.51
ECM1-201ENST00000346569 IL18RAPO95256 599 aa11.86□□□□□ -0.51
ECM1-201ENST00000346569 CST3P01034 146 aaPredicted RBP11.86□□□□□ -0.51
ECM1-201ENST00000346569 HLA-DRAP01903 254 aa11.86□□□□□ -0.51
ECM1-201ENST00000346569 CYLC1P35663 651 aaPredicted RBP11.86□□□□□ -0.51
ECM1-201ENST00000346569 SOX5P35711 763 aa11.86□□□□□ -0.51
ECM1-201ENST00000346569 STAT1P42224 750 aa11.86□□□□□ -0.51
ECM1-201ENST00000346569 MRPS6P82932 125 aaKnown RBP11.86□□□□□ -0.51
ECM1-201ENST00000346569 NCBP1Q09161 790 aaKnown RBP11.86□□□□□ -0.51
ECM1-201ENST00000346569 MGAT3Q09327 533 aa11.86□□□□□ -0.51
ECM1-201ENST00000346569 RAPGEF1Q13905 1077 aa11.86□□□□□ -0.51
ECM1-201ENST00000346569 DUOXA2Q1HG44 320 aa11.86□□□□□ -0.51
ECM1-201ENST00000346569 TMEM132AQ24JP5 1023 aa11.86□□□□□ -0.51
ECM1-201ENST00000346569 SLC10A6Q3KNW5 377 aa11.86□□□□□ -0.51
ECM1-201ENST00000346569 SLC9C1Q4G0N8 1177 aa11.86□□□□□ -0.51
ECM1-201ENST00000346569 SCARA3Q6AZY7 606 aa11.86□□□□□ -0.51
ECM1-201ENST00000346569 TRAPPC11Q7Z392 1133 aa11.86□□□□□ -0.51
ECM1-201ENST00000346569 ARRDC4Q8NCT1 418 aa11.86□□□□□ -0.51
ECM1-201ENST00000346569 ACRBPQ8NEB7 543 aa11.86□□□□□ -0.51
ECM1-201ENST00000346569 CCDC42Q96M95 316 aa11.86□□□□□ -0.51
ECM1-201ENST00000346569 KREMEN1Q96MU8 473 aa11.86□□□□□ -0.51
ECM1-201ENST00000346569 DESI2Q9BSY9 194 aa11.86□□□□□ -0.51
ECM1-201ENST00000346569 ASB7Q9H672 318 aa11.86□□□□□ -0.51
ECM1-201ENST00000346569 RPF1Q9H9Y2 349 aaKnown RBP11.86□□□□□ -0.51
ECM1-201ENST00000346569 GINS2Q9Y248 185 aa11.86□□□□□ -0.51
ECM1-201ENST00000346569 BZW2Q9Y6E2 419 aaKnown RBP11.86□□□□□ -0.51
ECM1-201ENST00000346569 F8VZ95 297 aa11.86□□□□□ -0.51
ECM1-201ENST00000346569 CHRNA1P02708 482 aa11.86□□□□□ -0.51
ECM1-201ENST00000346569 CCDC175P0C221 793 aa11.86□□□□□ -0.51
ECM1-201ENST00000346569 GRM5P41594 1212 aa11.86□□□□□ -0.51
ECM1-201ENST00000346569 OSTNP61366 133 aa11.86□□□□□ -0.51
ECM1-201ENST00000346569 PTK7Q13308 1070 aa11.86□□□□□ -0.51
ECM1-201ENST00000346569 ASIC2Q16515 512 aa11.86□□□□□ -0.51
ECM1-201ENST00000346569 TRIM71Q2Q1W2 868 aaKnown RBP11.86□□□□□ -0.51
ECM1-201ENST00000346569 DCAF4L1Q3SXM0 396 aa11.86□□□□□ -0.51
ECM1-201ENST00000346569 FAM47CQ5HY64 1035 aa11.86□□□□□ -0.51
ECM1-201ENST00000346569 NOTUMQ6P988 496 aa11.86□□□□□ -0.51
ECM1-201ENST00000346569 SLC27A1Q6PCB7 646 aa11.86□□□□□ -0.51
ECM1-201ENST00000346569 ZNF662Q6ZS27 426 aa11.86□□□□□ -0.51
ECM1-201ENST00000346569 RSPH3Q86UC2 560 aa11.86□□□□□ -0.51
ECM1-201ENST00000346569 EFCAB13Q8IY85 973 aa11.86□□□□□ -0.51
ECM1-201ENST00000346569 OLIG1Q8TAK6 271 aa11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms