RNA–Protein interactions for RNA: ENST00000346162.10

SRPK1-201, Transcript of SRSF protein kinase 1, humanhuman

TSL 2

Gene SRPK1, Length 4,762 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRPK1-201ENST00000346162 NOP14P78316 857 aaKnown RBP16.41■□□□□ 0.22
SRPK1-201ENST00000346162 CYTH1Q15438 398 aa16.41■□□□□ 0.22
SRPK1-201ENST00000346162 ITFG2Q969R8 447 aa16.41■□□□□ 0.22
SRPK1-201ENST00000346162 NRBF2Q96F24 287 aa16.41■□□□□ 0.22
SRPK1-201ENST00000346162 CATSPER2Q96P56 530 aa16.41■□□□□ 0.22
SRPK1-201ENST00000346162 EFHD1Q9BUP0 239 aa16.41■□□□□ 0.22
SRPK1-201ENST00000346162 DCLRE1BQ9H816 532 aa16.41■□□□□ 0.22
SRPK1-201ENST00000346162 HOXC10Q9NYD6 342 aa16.41■□□□□ 0.22
SRPK1-201ENST00000346162 OPLAHO14841 1288 aa16.4■□□□□ 0.22
SRPK1-201ENST00000346162 CFLARO15519 480 aa16.4■□□□□ 0.22
SRPK1-201ENST00000346162 ZNF394Q53GI3 561 aa16.4■□□□□ 0.22
SRPK1-201ENST00000346162 KRT39Q6A163 491 aa16.4■□□□□ 0.22
SRPK1-201ENST00000346162 PDZD4Q76G19 769 aaPredicted RBP16.4■□□□□ 0.22
SRPK1-201ENST00000346162 SYNJ2BP-COX16A0A087WUM0 186 aa16.4■□□□□ 0.22
SRPK1-201ENST00000346162 E7ENQ6 273 aa16.4■□□□□ 0.22
SRPK1-201ENST00000346162 NCAPHQ15003 741 aa16.4■□□□□ 0.22
SRPK1-201ENST00000346162 CRELD2Q6UXH1 353 aaPredicted RBP16.4■□□□□ 0.22
SRPK1-201ENST00000346162 RFFLQ8WZ73 363 aa16.4■□□□□ 0.22
SRPK1-201ENST00000346162 TTC17Q96AE7 1141 aa16.4■□□□□ 0.22
SRPK1-201ENST00000346162 CCDC124Q96CT7 223 aaKnown RBP16.4■□□□□ 0.22
SRPK1-201ENST00000346162 GORASP1Q9BQQ3 440 aa16.4■□□□□ 0.22
SRPK1-201ENST00000346162 NDUFA13Q9P0J0 144 aa16.4■□□□□ 0.22
SRPK1-201ENST00000346162 COX16Q9P0S2 106 aa16.4■□□□□ 0.22
SRPK1-201ENST00000346162 CHRM1P11229 460 aaPredicted RBP16.4■□□□□ 0.22
SRPK1-201ENST00000346162 OSBPP22059 807 aa16.4■□□□□ 0.22
SRPK1-201ENST00000346162 SOX5P35711 763 aa16.4■□□□□ 0.22
SRPK1-201ENST00000346162 DAB2IPQ5VWQ8 1189 aa16.4■□□□□ 0.22
SRPK1-201ENST00000346162 SWSAP1Q6NVH7 229 aa16.4■□□□□ 0.22
SRPK1-201ENST00000346162 TMBIM4Q9HC24 238 aa16.4■□□□□ 0.22
SRPK1-201ENST00000346162 PRR12Q9ULL5 1215 aa16.4■□□□□ 0.22
SRPK1-201ENST00000346162 TTI1O43156 1089 aa16.39■□□□□ 0.22
SRPK1-201ENST00000346162 XPOTO43592 962 aaKnown RBP16.39■□□□□ 0.22
SRPK1-201ENST00000346162 ENTPD3O75355 529 aa16.39■□□□□ 0.22
SRPK1-201ENST00000346162 EDRF1Q3B7T1 1238 aa16.39■□□□□ 0.22
SRPK1-201ENST00000346162 ERICH1Q86X53 443 aa16.39■□□□□ 0.22
SRPK1-201ENST00000346162 C7orf31Q8N865 590 aa16.39■□□□□ 0.22
SRPK1-201ENST00000346162 FGFR4P22455 802 aa16.39■□□□□ 0.21
SRPK1-201ENST00000346162 SLC12A2P55011 1212 aa16.39■□□□□ 0.21
SRPK1-201ENST00000346162 KLC3Q6P597 504 aa16.39■□□□□ 0.21
SRPK1-201ENST00000346162 SERPINI1Q99574 410 aa16.39■□□□□ 0.21
SRPK1-201ENST00000346162 ATP6V1B1P15313 513 aa16.39■□□□□ 0.21
SRPK1-201ENST00000346162 BASP1P80723 227 aaKnown RBP16.39■□□□□ 0.21
SRPK1-201ENST00000346162 ATP9AO75110 1047 aa16.39■□□□□ 0.21
SRPK1-201ENST00000346162 PLS3P13797 630 aa16.39■□□□□ 0.21
SRPK1-201ENST00000346162 UCHL3P15374 230 aa16.39■□□□□ 0.21
SRPK1-201ENST00000346162 NCF2P19878 526 aaPredicted RBP16.39■□□□□ 0.21
SRPK1-201ENST00000346162 RFX1P22670 979 aa16.39■□□□□ 0.21
SRPK1-201ENST00000346162 TARSP26639 723 aaKnown RBP16.39■□□□□ 0.21
SRPK1-201ENST00000346162 PKN1Q16512 942 aa16.39■□□□□ 0.21
SRPK1-201ENST00000346162 ILDR1Q86SU0 546 aaPredicted RBP16.39■□□□□ 0.21
SRPK1-201ENST00000346162 CCDC117Q8IWD4 279 aaPredicted RBP16.39■□□□□ 0.21
SRPK1-201ENST00000346162 ISCUQ9H1K1 167 aa16.39■□□□□ 0.21
SRPK1-201ENST00000346162 RPF1Q9H9Y2 349 aaKnown RBP16.39■□□□□ 0.21
SRPK1-201ENST00000346162 SEPT10Q9P0V9 454 aa16.39■□□□□ 0.21
SRPK1-201ENST00000346162 ERVK-24P63145 666 aa16.38■□□□□ 0.21
SRPK1-201ENST00000346162 PAPD7Q5XG87 772 aaKnown RBP16.38■□□□□ 0.21
SRPK1-201ENST00000346162 OR6B2Q6IFH4 312 aa16.38■□□□□ 0.21
SRPK1-201ENST00000346162 TMEM270Q6UE05 265 aa16.38■□□□□ 0.21
SRPK1-201ENST00000346162 OLFML1Q6UWY5 402 aa16.38■□□□□ 0.21
SRPK1-201ENST00000346162 NDEL1Q9GZM8 345 aa16.38■□□□□ 0.21
SRPK1-201ENST00000346162 LRCH1Q9Y2L9 728 aa16.38■□□□□ 0.21
SRPK1-201ENST00000346162 SHPRHQ149N8 1683 aa16.38■□□□□ 0.21
SRPK1-201ENST00000346162 TMEM120BA0PK00 339 aa16.38■□□□□ 0.21
SRPK1-201ENST00000346162 SFSWAPQ12872 951 aaKnown RBP16.38■□□□□ 0.21
SRPK1-201ENST00000346162 ZNF564Q8TBZ8 553 aaPredicted RBP16.38■□□□□ 0.21
SRPK1-201ENST00000346162 ERGIC2Q96RQ1 377 aa16.38■□□□□ 0.21
SRPK1-201ENST00000346162 C11orf70Q9BRQ4 267 aa16.38■□□□□ 0.21
SRPK1-201ENST00000346162 UBAP1Q9NZ09 502 aa16.38■□□□□ 0.21
SRPK1-201ENST00000346162 FBXO40Q9UH90 709 aa16.38■□□□□ 0.21
SRPK1-201ENST00000346162 GOLGA8QA0A0J9YX86 632 aa16.38■□□□□ 0.21
SRPK1-201ENST00000346162 GOLGA8OA6NCC3 632 aa16.38■□□□□ 0.21
SRPK1-201ENST00000346162 GOLGA8NF8WBI6 632 aa16.38■□□□□ 0.21
SRPK1-201ENST00000346162 ACTN1P12814 892 aa16.38■□□□□ 0.21
SRPK1-201ENST00000346162 KLK7P49862 253 aa16.38■□□□□ 0.21
SRPK1-201ENST00000346162 CAV1Q03135 178 aa16.38■□□□□ 0.21
SRPK1-201ENST00000346162 ASPHQ12797 758 aa16.38■□□□□ 0.21
SRPK1-201ENST00000346162 CNGA3Q16281 694 aa16.38■□□□□ 0.21
SRPK1-201ENST00000346162 MAPK6Q16659 721 aa16.38■□□□□ 0.21
SRPK1-201ENST00000346162 TMEM35BQ8NCS4 154 aa16.38■□□□□ 0.21
SRPK1-201ENST00000346162 PPP1R16BQ96T49 567 aa16.38■□□□□ 0.21
SRPK1-201ENST00000346162 SH2D3AQ9BRG2 576 aa16.38■□□□□ 0.21
SRPK1-201ENST00000346162 HEMGNQ9BXL5 484 aa16.38■□□□□ 0.21
SRPK1-201ENST00000346162 NACA2Q9H009 215 aa16.38■□□□□ 0.21
SRPK1-201ENST00000346162 MMADHCQ9H3L0 296 aaPredicted RBP16.38■□□□□ 0.21
SRPK1-201ENST00000346162 PCDHA10Q9Y5I2 948 aa16.38■□□□□ 0.21
SRPK1-201ENST00000346162 SALL1Q9NSC2 1324 aa16.37■□□□□ 0.21
SRPK1-201ENST00000346162 BAZ2BQ9UIF8 2168 aaKnown RBP16.37■□□□□ 0.21
SRPK1-201ENST00000346162 FDX1P10109 184 aa16.37■□□□□ 0.21
SRPK1-201ENST00000346162 RPA1P27694 616 aa16.37■□□□□ 0.21
SRPK1-201ENST00000346162 IREB2P48200 963 aaKnown RBP16.37■□□□□ 0.21
SRPK1-201ENST00000346162 ALDH5A1P51649 535 aaPredicted RBP16.37■□□□□ 0.21
SRPK1-201ENST00000346162 PASD1Q8IV76 773 aa16.37■□□□□ 0.21
SRPK1-201ENST00000346162 KCTD6Q8NC69 237 aa16.37■□□□□ 0.21
SRPK1-201ENST00000346162 WARS2Q9UGM6 360 aaKnown RBP16.37■□□□□ 0.21
SRPK1-201ENST00000346162 ZNF667Q5HYK9 610 aa16.37■□□□□ 0.21
SRPK1-201ENST00000346162 ATG16L1Q676U5 607 aa16.37■□□□□ 0.21
SRPK1-201ENST00000346162 ZCWPW1Q9H0M4 648 aa16.37■□□□□ 0.21
SRPK1-201ENST00000346162 HAO1Q9UJM8 370 aa16.37■□□□□ 0.21
SRPK1-201ENST00000346162 SLC16A3O15427 465 aaKnown RBP16.37■□□□□ 0.21
SRPK1-201ENST00000346162 NEK2P51955 445 aa16.37■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms