RNA–Protein interactions for RNA: ENST00000343253.11

CCDC18-201, Transcript of coiled-coil domain containing 18, humanhuman

APPRIS P2 TSL 5 BASIC

Gene CCDC18, Length 4,867 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC18-201ENST00000343253 ZCCHC18P0CG32 403 aa11.42□□□□□ -0.58
CCDC18-201ENST00000343253 STX5Q13190 355 aa11.42□□□□□ -0.58
CCDC18-201ENST00000343253 SZRD1Q7Z422 152 aa11.42□□□□□ -0.58
CCDC18-201ENST00000343253 ST13P5Q8NFI4 369 aaPredicted RBP11.42□□□□□ -0.58
CCDC18-201ENST00000343253 AGR3Q8TD06 166 aa11.42□□□□□ -0.58
CCDC18-201ENST00000343253 RSPH1Q8WYR4 309 aa11.42□□□□□ -0.58
CCDC18-201ENST00000343253 FAM20AQ96MK3 541 aa11.42□□□□□ -0.58
CCDC18-201ENST00000343253 TRIM51Q9BSJ1 452 aa11.42□□□□□ -0.58
CCDC18-201ENST00000343253 UNC45AQ9H3U1 944 aa11.42□□□□□ -0.58
CCDC18-201ENST00000343253 CCNL1Q9UK58 526 aaPredicted RBP11.42□□□□□ -0.58
CCDC18-201ENST00000343253 SOX13Q9UN79 622 aa11.42□□□□□ -0.58
CCDC18-201ENST00000343253 NEU2Q9Y3R4 380 aa11.42□□□□□ -0.58
CCDC18-201ENST00000343253 KIF21AQ7Z4S6 1674 aa11.42□□□□□ -0.58
CCDC18-201ENST00000343253 PLEKHG1Q9ULL1 1385 aa11.42□□□□□ -0.58
CCDC18-201ENST00000343253 PSAPP07602 524 aa11.41□□□□□ -0.58
CCDC18-201ENST00000343253 VAMP7P51809 220 aa11.41□□□□□ -0.58
CCDC18-201ENST00000343253 SLC20A2Q08357 652 aa11.41□□□□□ -0.58
CCDC18-201ENST00000343253 TP53BP2Q13625 1128 aa11.41□□□□□ -0.58
CCDC18-201ENST00000343253 TBC1D10BQ4KMP7 808 aaPredicted RBP11.41□□□□□ -0.58
CCDC18-201ENST00000343253 RWDD4Q6NW29 188 aaKnown RBP11.41□□□□□ -0.58
CCDC18-201ENST00000343253 PRPF39Q86UA1 669 aaKnown RBP11.41□□□□□ -0.58
CCDC18-201ENST00000343253 IFNEQ86WN2 208 aa11.41□□□□□ -0.58
CCDC18-201ENST00000343253 ZNF786Q8N393 782 aa11.41□□□□□ -0.58
CCDC18-201ENST00000343253 OR2W6PQ8NHA6 318 aa11.41□□□□□ -0.58
CCDC18-201ENST00000343253 PARVAQ9NVD7 372 aa11.41□□□□□ -0.58
CCDC18-201ENST00000343253 AKT3Q9Y243 479 aa11.41□□□□□ -0.58
CCDC18-201ENST00000343253 FHOD1Q9Y613 1164 aa11.41□□□□□ -0.58
CCDC18-201ENST00000343253 ADGRA3Q8IWK6 1321 aa11.41□□□□□ -0.58
CCDC18-201ENST00000343253 RAD51CO43502 376 aa11.41□□□□□ -0.58
CCDC18-201ENST00000343253 GHRP10912 638 aa11.41□□□□□ -0.58
CCDC18-201ENST00000343253 MLH1P40692 756 aa11.41□□□□□ -0.58
CCDC18-201ENST00000343253 CSTF3Q12996 717 aaKnown RBP11.41□□□□□ -0.58
CCDC18-201ENST00000343253 PFKFB3Q16875 520 aaPredicted RBP11.41□□□□□ -0.58
CCDC18-201ENST00000343253 FAM47CQ5HY64 1035 aa11.41□□□□□ -0.58
CCDC18-201ENST00000343253 SHC4Q6S5L8 630 aa11.41□□□□□ -0.58
CCDC18-201ENST00000343253 LRRC34Q8IZ02 419 aa11.41□□□□□ -0.58
CCDC18-201ENST00000343253 OR6P1Q8NGX9 317 aa11.41□□□□□ -0.58
CCDC18-201ENST00000343253 JADE3Q92613 823 aa11.41□□□□□ -0.58
CCDC18-201ENST00000343253 E2F7Q96AV8 911 aa11.41□□□□□ -0.58
CCDC18-201ENST00000343253 MTERF3Q96E29 417 aa11.41□□□□□ -0.58
CCDC18-201ENST00000343253 PUS3Q9BZE2 481 aaKnown RBP11.41□□□□□ -0.58
CCDC18-201ENST00000343253 POLD4Q9HCU8 107 aa11.41□□□□□ -0.58
CCDC18-201ENST00000343253 MARCOQ9UEW3 520 aaPredicted RBP11.41□□□□□ -0.58
CCDC18-201ENST00000343253 PCSK1NQ9UHG2 260 aa11.41□□□□□ -0.58
CCDC18-201ENST00000343253 GJA3Q9Y6H8 435 aa11.41□□□□□ -0.58
CCDC18-201ENST00000343253 ERVK-7P63135 1459 aa11.41□□□□□ -0.58
CCDC18-201ENST00000343253 DYTNA2CJ06 578 aa11.41□□□□□ -0.58
CCDC18-201ENST00000343253 H0YC42 278 aa11.41□□□□□ -0.58
CCDC18-201ENST00000343253 PRR29P0C7W0 189 aa11.41□□□□□ -0.58
CCDC18-201ENST00000343253 KCNQ4P56696 695 aa11.41□□□□□ -0.58
CCDC18-201ENST00000343253 PLOD1Q02809 727 aaPredicted RBP11.41□□□□□ -0.58
CCDC18-201ENST00000343253 NR1I3Q14994 352 aa11.41□□□□□ -0.58
CCDC18-201ENST00000343253 LVRNQ6Q4G3 990 aa11.41□□□□□ -0.58
CCDC18-201ENST00000343253 RCOR2Q8IZ40 523 aa11.41□□□□□ -0.58
CCDC18-201ENST00000343253 USP38Q8NB14 1042 aa11.41□□□□□ -0.58
CCDC18-201ENST00000343253 EGFL8Q99944 293 aa11.41□□□□□ -0.58
CCDC18-201ENST00000343253 MANSC1Q9H8J5 431 aa11.41□□□□□ -0.58
CCDC18-201ENST00000343253 CASS4Q9NQ75 786 aa11.41□□□□□ -0.58
CCDC18-201ENST00000343253 EIF4ENIF1Q9NRA8 985 aaKnown RBP11.41□□□□□ -0.58
CCDC18-201ENST00000343253 NIPSNAP3AQ9UFN0 247 aaPredicted RBP11.41□□□□□ -0.58
CCDC18-201ENST00000343253 SLC8A2Q9UPR5 921 aa11.41□□□□□ -0.58
CCDC18-201ENST00000343253 KANSL1LA0AUZ9 987 aa11.41□□□□□ -0.58
CCDC18-201ENST00000343253 E5RI56 91 aa11.41□□□□□ -0.58
CCDC18-201ENST00000343253 CAND2O75155 1236 aa11.41□□□□□ -0.58
CCDC18-201ENST00000343253 CCDC142Q17RM4 750 aa11.41□□□□□ -0.58
CCDC18-201ENST00000343253 MTERF2Q49AM1 385 aa11.41□□□□□ -0.58
CCDC18-201ENST00000343253 ZNF746Q6NUN9 644 aaPredicted RBP11.41□□□□□ -0.58
CCDC18-201ENST00000343253 USP17L2Q6R6M4 530 aa11.41□□□□□ -0.58
CCDC18-201ENST00000343253 RAD9BQ6WBX8 426 aa11.41□□□□□ -0.58
CCDC18-201ENST00000343253 CCDC80Q76M96 950 aa11.41□□□□□ -0.58
CCDC18-201ENST00000343253 AGBL1Q96MI9 1066 aa11.41□□□□□ -0.58
CCDC18-201ENST00000343253 FRMD8Q9BZ67 464 aaPredicted RBP11.41□□□□□ -0.58
CCDC18-201ENST00000343253 PABPC3Q9H361 631 aaKnown RBP11.41□□□□□ -0.58
CCDC18-201ENST00000343253 TMEM161AQ9NX61 479 aa11.41□□□□□ -0.58
CCDC18-201ENST00000343253 ZC3H7BQ9UGR2 993 aaKnown RBP11.41□□□□□ -0.58
CCDC18-201ENST00000343253 MAD2L2Q9UI95 211 aa11.41□□□□□ -0.58
CCDC18-201ENST00000343253 MKL2Q9ULH7 1088 aa11.41□□□□□ -0.58
CCDC18-201ENST00000343253 TBX22Q9Y458 520 aa11.41□□□□□ -0.58
CCDC18-201ENST00000343253 CSADQ9Y600 493 aa11.41□□□□□ -0.58
CCDC18-201ENST00000343253 MBD5Q9P267 1494 aa11.4□□□□□ -0.58
CCDC18-201ENST00000343253 POTECB2RU33 542 aa11.4□□□□□ -0.58
CCDC18-201ENST00000343253 H0YIN7 160 aa11.4□□□□□ -0.58
CCDC18-201ENST00000343253 USP1O94782 785 aa11.4□□□□□ -0.58
CCDC18-201ENST00000343253 OCM2P0CE71 109 aa11.4□□□□□ -0.58
CCDC18-201ENST00000343253 OCMP0CE72 109 aaPredicted RBP11.4□□□□□ -0.58
CCDC18-201ENST00000343253 TRIM49P0CI25 452 aa11.4□□□□□ -0.58
CCDC18-201ENST00000343253 TRIM49CP0CI26 452 aa11.4□□□□□ -0.58
CCDC18-201ENST00000343253 SCP2P22307 547 aa11.4□□□□□ -0.58
CCDC18-201ENST00000343253 FXR1P51114 621 aaKnown RBP eCLIP11.4□□□□□ -0.58
CCDC18-201ENST00000343253 KHDRBS1Q07666 443 aaKnown RBP eCLIP11.4□□□□□ -0.58
CCDC18-201ENST00000343253 ARMCX4Q5H9R4 360 aa11.4□□□□□ -0.58
CCDC18-201ENST00000343253 RINLQ6ZS11 566 aa11.4□□□□□ -0.58
CCDC18-201ENST00000343253 BARGINQ6ZT62 677 aa11.4□□□□□ -0.58
CCDC18-201ENST00000343253 IFT43Q96FT9 208 aa11.4□□□□□ -0.58
CCDC18-201ENST00000343253 MS4A14Q96JA4 679 aa11.4□□□□□ -0.58
CCDC18-201ENST00000343253 AGPAT1Q99943 283 aa11.4□□□□□ -0.58
CCDC18-201ENST00000343253 GREM2Q9H772 168 aa11.4□□□□□ -0.58
CCDC18-201ENST00000343253 HACD3Q9P035 362 aa11.4□□□□□ -0.58
CCDC18-201ENST00000343253 HMOX2P30519 316 aa11.4□□□□□ -0.58
CCDC18-201ENST00000343253 EIF3EP60228 445 aaKnown RBP11.4□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms