RNA–Protein interactions for RNA: ENST00000342690.4

RBM38-201, Transcript of RNA binding motif protein 38, humanhuman

TSL 3

Gene RBM38, Length 852 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM38-201ENST00000342690 SAMD11Q96NU1 681 aa23.91■■□□□ 1.42
RBM38-201ENST00000342690 RPS6KC1Q96S38 1066 aa23.91■■□□□ 1.42
RBM38-201ENST00000342690 CBWD1Q9BRT8 395 aa23.91■■□□□ 1.42
RBM38-201ENST00000342690 NRDE2Q9H7Z3 1164 aa23.91■■□□□ 1.42
RBM38-201ENST00000342690 KANSL3Q9P2N6 904 aa23.91■■□□□ 1.42
RBM38-201ENST00000342690 PLAGL2Q9UPG8 496 aa23.91■■□□□ 1.42
RBM38-201ENST00000342690 TRAF3IP3Q9Y228 551 aa23.91■■□□□ 1.42
RBM38-201ENST00000342690 RWDD3Q9Y3V2 267 aa23.91■■□□□ 1.42
RBM38-201ENST00000342690 CHD9Q3L8U1 2897 aa23.9■■□□□ 1.42
RBM38-201ENST00000342690 CITO14578 2027 aa23.9■■□□□ 1.42
RBM38-201ENST00000342690 BICDL2A1A5D9 508 aa23.9■■□□□ 1.42
RBM38-201ENST00000342690 CLIC2O15247 247 aa23.9■■□□□ 1.42
RBM38-201ENST00000342690 B4GALT3O60512 393 aa23.9■■□□□ 1.42
RBM38-201ENST00000342690 LDHAP00338 332 aaKnown RBP23.9■■□□□ 1.42
RBM38-201ENST00000342690 CCNE1P24864 410 aa23.9■■□□□ 1.42
RBM38-201ENST00000342690 CTNNB1P35222 781 aa23.9■■□□□ 1.42
RBM38-201ENST00000342690 YARSP54577 528 aaKnown RBP23.9■■□□□ 1.42
RBM38-201ENST00000342690 RNASELQ05823 741 aaKnown RBP23.9■■□□□ 1.42
RBM38-201ENST00000342690 PAK1Q13153 545 aa23.9■■□□□ 1.42
RBM38-201ENST00000342690 ZSCAN23Q3MJ62 389 aa23.9■■□□□ 1.42
RBM38-201ENST00000342690 CENPPQ6IPU0 288 aa23.9■■□□□ 1.42
RBM38-201ENST00000342690 ZNF280BQ86YH2 543 aa23.9■■□□□ 1.42
RBM38-201ENST00000342690 C12orf56Q8IXR9 622 aa23.9■■□□□ 1.42
RBM38-201ENST00000342690 NELFBQ8WX92 580 aa23.9■■□□□ 1.42
RBM38-201ENST00000342690 PCIF1Q9H4Z3 704 aa23.9■■□□□ 1.42
RBM38-201ENST00000342690 TOPORSQ9NS56 1045 aaPredicted RBP23.9■■□□□ 1.42
RBM38-201ENST00000342690 CPSF3Q9UKF6 684 aaKnown RBP23.9■■□□□ 1.42
RBM38-201ENST00000342690 TRIP11Q15643 1979 aa23.89■■□□□ 1.42
RBM38-201ENST00000342690 SYCE3A1L190 88 aa23.89■■□□□ 1.41
RBM38-201ENST00000342690 DDHD2O94830 711 aa23.89■■□□□ 1.41
RBM38-201ENST00000342690 CLTAP09496 248 aa23.89■■□□□ 1.41
RBM38-201ENST00000342690 CCDC192P0DO97 292 aa23.89■■□□□ 1.41
RBM38-201ENST00000342690 CXCL8P10145 99 aa23.89■■□□□ 1.41
RBM38-201ENST00000342690 LAG3P18627 525 aa23.89■■□□□ 1.41
RBM38-201ENST00000342690 BMPR1AP36894 532 aa23.89■■□□□ 1.41
RBM38-201ENST00000342690 CYP2J2P51589 502 aa23.89■■□□□ 1.41
RBM38-201ENST00000342690 LRRC63Q05C16 580 aa23.89■■□□□ 1.41
RBM38-201ENST00000342690 TYRO3Q06418 890 aa23.89■■□□□ 1.41
RBM38-201ENST00000342690 GRIK3Q13003 919 aa23.89■■□□□ 1.41
RBM38-201ENST00000342690 GRIN2CQ14957 1233 aa23.89■■□□□ 1.41
RBM38-201ENST00000342690 XKR4Q5GH76 650 aa23.89■■□□□ 1.41
RBM38-201ENST00000342690 ALKAL1Q6UXT8 129 aa23.89■■□□□ 1.41
RBM38-201ENST00000342690 COLGALT1Q8NBJ5 622 aa23.89■■□□□ 1.41
RBM38-201ENST00000342690 ZSWIM2Q8NEG5 633 aa23.89■■□□□ 1.41
RBM38-201ENST00000342690 NOC3LQ8WTT2 800 aaKnown RBP23.89■■□□□ 1.41
RBM38-201ENST00000342690 HSPBP1Q9NZL4 362 aa23.89■■□□□ 1.41
RBM38-201ENST00000342690 C5orf67F2Z3F1 127 aa23.88■■□□□ 1.41
RBM38-201ENST00000342690 ZC3H11AO75152 810 aaKnown RBP eCLIP23.88■■□□□ 1.417e-6■■□□□ 13.7
RBM38-201ENST00000342690 NR3C1P04150 777 aa23.88■■□□□ 1.41
RBM38-201ENST00000342690 RPL13P26373 211 aaKnown RBP23.88■■□□□ 1.41
RBM38-201ENST00000342690 PBX3P40426 434 aa23.88■■□□□ 1.41
RBM38-201ENST00000342690 ACOT2P49753 483 aa23.88■■□□□ 1.41
RBM38-201ENST00000342690 EDRF1Q3B7T1 1238 aa23.88■■□□□ 1.41
RBM38-201ENST00000342690 SLC10A6Q3KNW5 377 aa23.88■■□□□ 1.41
RBM38-201ENST00000342690 ZCWPW2Q504Y3 356 aa23.88■■□□□ 1.41
RBM38-201ENST00000342690 GLRA4Q5JXX5 417 aa23.88■■□□□ 1.41
RBM38-201ENST00000342690 GPD1LQ8N335 351 aa23.88■■□□□ 1.41
RBM38-201ENST00000342690 DEFB123Q8N688 67 aa23.88■■□□□ 1.41
RBM38-201ENST00000342690 FBXO22Q8NEZ5 403 aa23.88■■□□□ 1.41
RBM38-201ENST00000342690 SAAL1Q96ER3 474 aa23.88■■□□□ 1.41
RBM38-201ENST00000342690 KIAA1586Q9HCI6 787 aa23.88■■□□□ 1.41
RBM38-201ENST00000342690 DNAJB4Q9UDY4 337 aa23.88■■□□□ 1.41
RBM38-201ENST00000342690 PDCD11Q14690 1871 aaKnown RBP23.87■■□□□ 1.41
RBM38-201ENST00000342690 RFXAPO00287 272 aa23.87■■□□□ 1.41
RBM38-201ENST00000342690 EXTL3O43909 919 aa23.87■■□□□ 1.41
RBM38-201ENST00000342690 DSC1Q08554 894 aa23.87■■□□□ 1.41
RBM38-201ENST00000342690 MYBPC2Q14324 1141 aa23.87■■□□□ 1.41
RBM38-201ENST00000342690 ENOX2Q16206 610 aaKnown RBP23.87■■□□□ 1.41
RBM38-201ENST00000342690 NFIL3Q16649 462 aa23.87■■□□□ 1.41
RBM38-201ENST00000342690 CT47A1Q5JQC4 288 aaPredicted RBP23.87■■□□□ 1.41
RBM38-201ENST00000342690 CRELD2Q6UXH1 353 aaPredicted RBP23.87■■□□□ 1.41
RBM38-201ENST00000342690 SLC9A9Q8IVB4 645 aa23.87■■□□□ 1.41
RBM38-201ENST00000342690 COLGALT2Q8IYK4 626 aa23.87■■□□□ 1.41
RBM38-201ENST00000342690 XXYLT1Q8NBI6 393 aa23.87■■□□□ 1.41
RBM38-201ENST00000342690 FAM213AQ9BRX8 229 aa23.87■■□□□ 1.41
RBM38-201ENST00000342690 PRDM12Q9H4Q4 367 aa23.87■■□□□ 1.41
RBM38-201ENST00000342690 RPF1Q9H9Y2 349 aaKnown RBP23.87■■□□□ 1.41
RBM38-201ENST00000342690 AAASQ9NRG9 546 aa23.87■■□□□ 1.41
RBM38-201ENST00000342690 CNTN3Q9P232 1028 aa23.87■■□□□ 1.41
RBM38-201ENST00000342690 RWDD2AQ9UIY3 292 aa23.87■■□□□ 1.41
RBM38-201ENST00000342690 GOLGA8IPA6NC78 632 aa23.86■■□□□ 1.41
RBM38-201ENST00000342690 GOLGA8JA6NMD2 632 aa23.86■■□□□ 1.41
RBM38-201ENST00000342690 THP07101 528 aa23.86■■□□□ 1.41
RBM38-201ENST00000342690 NR2F2P24468 414 aa23.86■■□□□ 1.41
RBM38-201ENST00000342690 BCAR1P56945 870 aa23.86■■□□□ 1.41
RBM38-201ENST00000342690 NAB2Q15742 525 aa23.86■■□□□ 1.41
RBM38-201ENST00000342690 ANKRD40Q6AI12 368 aa23.86■■□□□ 1.41
RBM38-201ENST00000342690 KCNT2Q6UVM3 1135 aa23.86■■□□□ 1.41
RBM38-201ENST00000342690 GDPD5Q8WTR4 605 aa23.86■■□□□ 1.41
RBM38-201ENST00000342690 ZMAT2Q96NC0 199 aaKnown RBP23.86■■□□□ 1.41
RBM38-201ENST00000342690 ZNF558Q96NG5 402 aa23.86■■□□□ 1.41
RBM38-201ENST00000342690 FAM193BQ96PV7 902 aaPredicted RBP23.86■■□□□ 1.41
RBM38-201ENST00000342690 PPP1R10Q96QC0 940 aaKnown RBP23.86■■□□□ 1.41
RBM38-201ENST00000342690 PLVAPQ9BX97 442 aa23.86■■□□□ 1.41
RBM38-201ENST00000342690 PCDHB12Q9Y5F1 795 aa23.86■■□□□ 1.41
RBM38-201ENST00000342690 ANK1P16157 1881 aa23.85■■□□□ 1.41
RBM38-201ENST00000342690 SMIM28A0A1B0GU29 152 aa23.85■■□□□ 1.41
RBM38-201ENST00000342690 TTC26A0AVF1 554 aa23.85■■□□□ 1.41
RBM38-201ENST00000342690 TRIM49BA6NDI0 452 aa23.85■■□□□ 1.41
RBM38-201ENST00000342690 EXOC3O60645 756 aa23.85■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms