RNA–Protein interactions for RNA: ENST00000342310.7

LMX1A-202, Transcript of LIM homeobox transcription factor 1 alpha, humanhuman

APPRIS P1 TSL 2 BASIC

Gene LMX1A, Length 3,545 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1A-202ENST00000342310 EXOC1LA0A1B0GW35 172 aa13.38□□□□□ -0.27
LMX1A-202ENST00000342310 INO80B-WBP1J3KQ70 363 aa13.38□□□□□ -0.27
LMX1A-202ENST00000342310 PHF2O75151 1096 aa13.38□□□□□ -0.27
LMX1A-202ENST00000342310 RTN2O75298 545 aa13.38□□□□□ -0.27
LMX1A-202ENST00000342310 GRAP2O75791 330 aa13.38□□□□□ -0.27
LMX1A-202ENST00000342310 KRT1P04264 644 aa13.38□□□□□ -0.27
LMX1A-202ENST00000342310 COILP38432 576 aaPredicted RBP13.38□□□□□ -0.27
LMX1A-202ENST00000342310 TRAF1Q13077 416 aa13.38□□□□□ -0.27
LMX1A-202ENST00000342310 SLC17A8Q8NDX2 589 aa13.38□□□□□ -0.27
LMX1A-202ENST00000342310 PLEKHO2Q8TD55 490 aa13.38□□□□□ -0.27
LMX1A-202ENST00000342310 KREMEN1Q96MU8 473 aa13.38□□□□□ -0.27
LMX1A-202ENST00000342310 WRNIP1Q96S55 665 aa13.38□□□□□ -0.27
LMX1A-202ENST00000342310 CCDC77Q9BR77 488 aa13.38□□□□□ -0.27
LMX1A-202ENST00000342310 INO80BQ9C086 356 aaPredicted RBP13.38□□□□□ -0.27
LMX1A-202ENST00000342310 PICK1Q9NRD5 415 aa13.38□□□□□ -0.27
LMX1A-202ENST00000342310 SYNJ2BP-COX16A0A087WUM0 186 aa13.38□□□□□ -0.27
LMX1A-202ENST00000342310 SPDYE2BA6NHP3 402 aa13.38□□□□□ -0.27
LMX1A-202ENST00000342310 DNM1LO00429 736 aa13.38□□□□□ -0.27
LMX1A-202ENST00000342310 CFHP08603 1231 aa13.38□□□□□ -0.27
LMX1A-202ENST00000342310 SPDYE6P0CI01 402 aa13.38□□□□□ -0.27
LMX1A-202ENST00000342310 CA4P22748 312 aa13.38□□□□□ -0.27
LMX1A-202ENST00000342310 PTENP60484 403 aa13.38□□□□□ -0.27
LMX1A-202ENST00000342310 USP37Q86T82 979 aa13.38□□□□□ -0.27
LMX1A-202ENST00000342310 LRRC71Q8N4P6 559 aa13.38□□□□□ -0.27
LMX1A-202ENST00000342310 POLR3FQ9H1D9 316 aaPredicted RBP13.38□□□□□ -0.27
LMX1A-202ENST00000342310 C12orf65Q9H3J6 166 aaKnown RBP13.38□□□□□ -0.27
LMX1A-202ENST00000342310 ABCF3Q9NUQ8 709 aa13.38□□□□□ -0.27
LMX1A-202ENST00000342310 COX16Q9P0S2 106 aa13.38□□□□□ -0.27
LMX1A-202ENST00000342310 RIPK3Q9Y572 518 aa13.38□□□□□ -0.27
LMX1A-202ENST00000342310 CYP3A7-CYP3A51PA0A087WV96 503 aa13.38□□□□□ -0.27
LMX1A-202ENST00000342310 ITIH3Q06033 890 aa13.38□□□□□ -0.27
LMX1A-202ENST00000342310 GPS1Q13098 491 aa13.38□□□□□ -0.27
LMX1A-202ENST00000342310 DNAJC3Q13217 504 aa13.38□□□□□ -0.27
LMX1A-202ENST00000342310 BBS9Q3SYG4 887 aa13.38□□□□□ -0.27
LMX1A-202ENST00000342310 PPP1R21Q6ZMI0 780 aa13.38□□□□□ -0.27
LMX1A-202ENST00000342310 PRCCQ92733 491 aaPredicted RBP13.38□□□□□ -0.27
LMX1A-202ENST00000342310 MKL1Q969V6 931 aa13.38□□□□□ -0.27
LMX1A-202ENST00000342310 HES6Q96HZ4 224 aa13.38□□□□□ -0.27
LMX1A-202ENST00000342310 GMCL1Q96IK5 515 aa13.38□□□□□ -0.27
LMX1A-202ENST00000342310 MSTO1Q9BUK6 570 aa13.38□□□□□ -0.27
LMX1A-202ENST00000342310 R3HDM2Q9Y2K5 976 aaKnown RBP13.38□□□□□ -0.27
LMX1A-202ENST00000342310 TMX2Q9Y320 296 aa13.38□□□□□ -0.27
LMX1A-202ENST00000342310 UBR2Q8IWV8 1755 aa13.37□□□□□ -0.27
LMX1A-202ENST00000342310 CHRNA3P32297 505 aa13.37□□□□□ -0.27
LMX1A-202ENST00000342310 BASP1P80723 227 aaKnown RBP13.37□□□□□ -0.27
LMX1A-202ENST00000342310 PPP2R5DQ14738 602 aa13.37□□□□□ -0.27
LMX1A-202ENST00000342310 P3H1Q32P28 736 aa13.37□□□□□ -0.27
LMX1A-202ENST00000342310 CALR3Q96L12 384 aaKnown RBP13.37□□□□□ -0.27
LMX1A-202ENST00000342310 KIF9Q9HAQ2 790 aa13.37□□□□□ -0.27
LMX1A-202ENST00000342310 WDR64B1ANS9 1081 aa13.37□□□□□ -0.27
LMX1A-202ENST00000342310 KIAA0391O15091 583 aaKnown RBP13.37□□□□□ -0.27
LMX1A-202ENST00000342310 BRD2P25440 801 aaKnown RBP13.37□□□□□ -0.27
LMX1A-202ENST00000342310 GNA15P30679 374 aa13.37□□□□□ -0.27
LMX1A-202ENST00000342310 SLC27A3Q5K4L6 730 aa13.37□□□□□ -0.27
LMX1A-202ENST00000342310 LIN9Q5TKA1 542 aa13.37□□□□□ -0.27
LMX1A-202ENST00000342310 NCAPG2Q86XI2 1143 aa13.37□□□□□ -0.27
LMX1A-202ENST00000342310 ZBED8Q8IZ13 594 aa13.37□□□□□ -0.27
LMX1A-202ENST00000342310 OSBPL7Q9BZF2 842 aa13.37□□□□□ -0.27
LMX1A-202ENST00000342310 TBX20Q9UMR3 447 aa13.37□□□□□ -0.27
LMX1A-202ENST00000342310 SUFUQ9UMX1 484 aa13.37□□□□□ -0.27
LMX1A-202ENST00000342310 SUGT1Q9Y2Z0 365 aa13.37□□□□□ -0.27
LMX1A-202ENST00000342310 NR3C2P08235 984 aa13.36□□□□□ -0.27
LMX1A-202ENST00000342310 PRKCIP41743 596 aa13.36□□□□□ -0.27
LMX1A-202ENST00000342310 HYIQ5T013 277 aa13.36□□□□□ -0.27
LMX1A-202ENST00000342310 HHATQ5VTY9 493 aa13.36□□□□□ -0.27
LMX1A-202ENST00000342310 IZUMO3Q5VZ72 239 aa13.36□□□□□ -0.27
LMX1A-202ENST00000342310 KCNV1Q6PIU1 500 aa13.36□□□□□ -0.27
LMX1A-202ENST00000342310 RPAINQ86UA6 219 aa13.36□□□□□ -0.27
LMX1A-202ENST00000342310 TMEM130Q8N3G9 435 aa13.36□□□□□ -0.27
LMX1A-202ENST00000342310 TTLL6Q8N841 843 aa13.36□□□□□ -0.27
LMX1A-202ENST00000342310 TGS1Q96RS0 853 aaKnown RBP13.36□□□□□ -0.27
LMX1A-202ENST00000342310 DDX3YO15523 660 aaKnown RBP13.36□□□□□ -0.27
LMX1A-202ENST00000342310 CYP3A7P24462 503 aa13.36□□□□□ -0.27
LMX1A-202ENST00000342310 SCTRP47872 440 aa13.36□□□□□ -0.27
LMX1A-202ENST00000342310 PSMC5P62195 406 aa13.36□□□□□ -0.27
LMX1A-202ENST00000342310 SKOR1P84550 965 aa13.36□□□□□ -0.27
LMX1A-202ENST00000342310 OVGP1Q12889 678 aa13.36□□□□□ -0.27
LMX1A-202ENST00000342310 ZBTB41Q5SVQ8 909 aa13.36□□□□□ -0.27
LMX1A-202ENST00000342310 EPM2AIP1Q7L775 607 aaPredicted RBP13.36□□□□□ -0.27
LMX1A-202ENST00000342310 DEFB132Q7Z7B7 95 aa13.36□□□□□ -0.27
LMX1A-202ENST00000342310 ZC3H18Q86VM9 953 aaKnown RBP13.36□□□□□ -0.27
LMX1A-202ENST00000342310 SYTL5Q8TDW5 730 aaPredicted RBP13.36□□□□□ -0.27
LMX1A-202ENST00000342310 HSPH1Q92598 858 aa13.36□□□□□ -0.27
LMX1A-202ENST00000342310 IKBKGQ9Y6K9 419 aa13.36□□□□□ -0.27
LMX1A-202ENST00000342310 SHOX2O60902 331 aaPredicted RBP13.36□□□□□ -0.27
LMX1A-202ENST00000342310 CAP2P40123 477 aa13.36□□□□□ -0.27
LMX1A-202ENST00000342310 GCLCP48506 637 aaPredicted RBP13.36□□□□□ -0.27
LMX1A-202ENST00000342310 C6orf118Q5T5N4 469 aa13.36□□□□□ -0.27
LMX1A-202ENST00000342310 TTC16Q8NEE8 873 aa13.36□□□□□ -0.27
LMX1A-202ENST00000342310 MCEEQ96PE7 176 aa13.36□□□□□ -0.27
LMX1A-202ENST00000342310 ECM29Q5VYK3 1845 aa13.36□□□□□ -0.27
LMX1A-202ENST00000342310 A6NNZ2 444 aa13.35□□□□□ -0.27
LMX1A-202ENST00000342310 EIF3DO15371 548 aaKnown RBP eCLIP13.35□□□□□ -0.27
LMX1A-202ENST00000342310 TRAPPC3O43617 180 aa13.35□□□□□ -0.27
LMX1A-202ENST00000342310 HLA-DRAP01903 254 aa13.35□□□□□ -0.27
LMX1A-202ENST00000342310 ECHS1P30084 290 aa13.35□□□□□ -0.27
LMX1A-202ENST00000342310 NRLP54845 237 aa13.35□□□□□ -0.27
LMX1A-202ENST00000342310 MRPS9P82933 396 aaKnown RBP13.35□□□□□ -0.27
LMX1A-202ENST00000342310 MKRN3Q13064 507 aaKnown RBP13.35□□□□□ -0.27
LMX1A-202ENST00000342310 BYSLQ13895 437 aaKnown RBP13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms