RNA–Protein interactions for RNA: ENST00000342203.7

SSX2IP-201, Transcript of SSX family member 2 interacting protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSX2IP, Length 5,835 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSX2IP-201ENST00000342203 KRT35Q92764 455 aa13.27□□□□□ -0.29
SSX2IP-201ENST00000342203 POP1Q99575 1024 aaKnown RBP13.27□□□□□ -0.29
SSX2IP-201ENST00000342203 MKNK1Q9BUB5 465 aa13.27□□□□□ -0.29
SSX2IP-201ENST00000342203 OSBPL8Q9BZF1 889 aa13.27□□□□□ -0.29
SSX2IP-201ENST00000342203 WDR11Q9BZH6 1224 aa13.27□□□□□ -0.29
SSX2IP-201ENST00000342203 GGA2Q9UJY4 613 aa13.27□□□□□ -0.29
SSX2IP-201ENST00000342203 FOXO6A8MYZ6 492 aa13.27□□□□□ -0.29
SSX2IP-201ENST00000342203 BTNL9Q6UXG8 535 aa13.27□□□□□ -0.29
SSX2IP-201ENST00000342203 SLC30A10Q6XR72 485 aa13.27□□□□□ -0.29
SSX2IP-201ENST00000342203 ACSF2Q96CM8 615 aaPredicted RBP13.27□□□□□ -0.29
SSX2IP-201ENST00000342203 CEP170P1Q96L14 293 aa13.27□□□□□ -0.29
SSX2IP-201ENST00000342203 RIOK1Q9BRS2 568 aaKnown RBP13.27□□□□□ -0.29
SSX2IP-201ENST00000342203 LZTS1Q9Y250 596 aa13.27□□□□□ -0.29
SSX2IP-201ENST00000342203 HEY1Q9Y5J3 304 aa13.27□□□□□ -0.29
SSX2IP-201ENST00000342203 NCALDP61601 193 aa13.26□□□□□ -0.29
SSX2IP-201ENST00000342203 EVX2Q03828 476 aa13.26□□□□□ -0.29
SSX2IP-201ENST00000342203 CNGA2Q16280 664 aa13.26□□□□□ -0.29
SSX2IP-201ENST00000342203 STK32AQ8WU08 396 aa13.26□□□□□ -0.29
SSX2IP-201ENST00000342203 PGM2Q96G03 612 aa13.26□□□□□ -0.29
SSX2IP-201ENST00000342203 MRPL46Q9H2W6 279 aaKnown RBP13.26□□□□□ -0.29
SSX2IP-201ENST00000342203 RNPEPL1Q9HAU8 725 aa13.26□□□□□ -0.29
SSX2IP-201ENST00000342203 AIPL1Q9NZN9 384 aa13.26□□□□□ -0.29
SSX2IP-201ENST00000342203 RASA1P20936 1047 aa13.26□□□□□ -0.29
SSX2IP-201ENST00000342203 EEF1B2P24534 225 aaKnown RBP13.26□□□□□ -0.29
SSX2IP-201ENST00000342203 KLRK1P26718 216 aa13.26□□□□□ -0.29
SSX2IP-201ENST00000342203 C3orf62Q6ZUJ4 267 aa13.26□□□□□ -0.29
SSX2IP-201ENST00000342203 RAPH1Q70E73 1250 aa13.26□□□□□ -0.29
SSX2IP-201ENST00000342203 MIGA2Q7L4E1 593 aa13.26□□□□□ -0.29
SSX2IP-201ENST00000342203 CCT6BQ92526 530 aa13.26□□□□□ -0.29
SSX2IP-201ENST00000342203 CDKL2Q92772 493 aa13.26□□□□□ -0.29
SSX2IP-201ENST00000342203 MAGEB18Q96M61 343 aa13.26□□□□□ -0.29
SSX2IP-201ENST00000342203 BLOC1S4Q9NUP1 217 aa13.26□□□□□ -0.29
SSX2IP-201ENST00000342203 ARAP3Q8WWN8 1544 aa13.26□□□□□ -0.29
SSX2IP-201ENST00000342203 BMP3P12645 472 aa13.26□□□□□ -0.29
SSX2IP-201ENST00000342203 ACADSP16219 412 aa13.26□□□□□ -0.29
SSX2IP-201ENST00000342203 KLHL38Q2WGJ6 581 aa13.26□□□□□ -0.29
SSX2IP-201ENST00000342203 CRELD2Q6UXH1 353 aaPredicted RBP13.26□□□□□ -0.29
SSX2IP-201ENST00000342203 IZUMO2Q6UXV1 221 aa13.26□□□□□ -0.29
SSX2IP-201ENST00000342203 ELMO3Q96BJ8 720 aa13.26□□□□□ -0.29
SSX2IP-201ENST00000342203 ARHGEF26Q96DR7 871 aa13.26□□□□□ -0.29
SSX2IP-201ENST00000342203 A1CFQ9NQ94 594 aaKnown RBP13.26□□□□□ -0.29
SSX2IP-201ENST00000342203 SENP1Q9P0U3 644 aa13.26□□□□□ -0.29
SSX2IP-201ENST00000342203 INPP5FQ9Y2H2 1132 aa13.26□□□□□ -0.29
SSX2IP-201ENST00000342203 O00370 1275 aa13.26□□□□□ -0.29
SSX2IP-201ENST00000342203 PSMA2P25787 234 aa13.26□□□□□ -0.29
SSX2IP-201ENST00000342203 POLGP54098 1239 aaPredicted RBP13.26□□□□□ -0.29
SSX2IP-201ENST00000342203 GSCP56915 257 aaPredicted RBP13.26□□□□□ -0.29
SSX2IP-201ENST00000342203 GALNT4Q8N4A0 578 aa13.26□□□□□ -0.29
SSX2IP-201ENST00000342203 CHURC1Q8WUH1 139 aa13.26□□□□□ -0.29
SSX2IP-201ENST00000342203 PNMA5Q96PV4 448 aa13.26□□□□□ -0.29
SSX2IP-201ENST00000342203 STK10O94804 968 aaKnown RBP13.26□□□□□ -0.29
SSX2IP-201ENST00000342203 FXR2P51116 673 aaKnown RBP eCLIP13.26□□□□□ -0.29
SSX2IP-201ENST00000342203 SLC5A5Q92911 643 aa13.26□□□□□ -0.29
SSX2IP-201ENST00000342203 FAM213AQ9BRX8 229 aa13.26□□□□□ -0.29
SSX2IP-201ENST00000342203 APOL6Q9BWW8 343 aa13.26□□□□□ -0.29
SSX2IP-201ENST00000342203 MRPL11Q9Y3B7 192 aaKnown RBP13.26□□□□□ -0.29
SSX2IP-201ENST00000342203 MROH1Q8NDA8 1641 aa13.25□□□□□ -0.29
SSX2IP-201ENST00000342203 TTC4O95801 387 aa13.25□□□□□ -0.29
SSX2IP-201ENST00000342203 TNFRSF8P28908 595 aa13.25□□□□□ -0.29
SSX2IP-201ENST00000342203 OSTNP61366 133 aa13.25□□□□□ -0.29
SSX2IP-201ENST00000342203 RPS6KA2Q15349 733 aa13.25□□□□□ -0.29
SSX2IP-201ENST00000342203 CNGA3Q16281 694 aa13.25□□□□□ -0.29
SSX2IP-201ENST00000342203 RBM41Q96IZ5 413 aaKnown RBP13.25□□□□□ -0.29
SSX2IP-201ENST00000342203 MIS12Q9H081 205 aa13.25□□□□□ -0.29
SSX2IP-201ENST00000342203 PXDNQ92626 1479 aa13.25□□□□□ -0.29
SSX2IP-201ENST00000342203 PYGMP11217 842 aa13.25□□□□□ -0.29
SSX2IP-201ENST00000342203 TFAMQ00059 246 aaKnown RBP13.25□□□□□ -0.29
SSX2IP-201ENST00000342203 AUHQ13825 339 aaKnown RBP13.25□□□□□ -0.29
SSX2IP-201ENST00000342203 FAM111AQ96PZ2 611 aa13.25□□□□□ -0.29
SSX2IP-201ENST00000342203 VPS11Q9H270 941 aa13.25□□□□□ -0.29
SSX2IP-201ENST00000342203 SLCO1B3Q9NPD5 702 aa13.25□□□□□ -0.29
SSX2IP-201ENST00000342203 ARHGEF28Q8N1W1 1705 aaKnown RBP13.25□□□□□ -0.29
SSX2IP-201ENST00000342203 WTIPA6NIX2 430 aaPredicted RBP13.25□□□□□ -0.29
SSX2IP-201ENST00000342203 PIAS1O75925 651 aa13.25□□□□□ -0.29
SSX2IP-201ENST00000342203 TMEM191BP0C7N4 346 aa13.25□□□□□ -0.29
SSX2IP-201ENST00000342203 LCA5Q86VQ0 697 aa13.25□□□□□ -0.29
SSX2IP-201ENST00000342203 CATSPER3Q86XQ3 398 aa13.25□□□□□ -0.29
SSX2IP-201ENST00000342203 DEPDC1BQ8WUY9 529 aa13.25□□□□□ -0.29
SSX2IP-201ENST00000342203 SCG3Q8WXD2 468 aaKnown RBP13.25□□□□□ -0.29
SSX2IP-201ENST00000342203 CCDC17Q96LX7 622 aa13.25□□□□□ -0.29
SSX2IP-201ENST00000342203 PWWP2AQ96N64 755 aa13.25□□□□□ -0.29
SSX2IP-201ENST00000342203 PSMC3IPQ9P2W1 217 aaPredicted RBP13.25□□□□□ -0.29
SSX2IP-201ENST00000342203 MED24O75448 989 aa13.25□□□□□ -0.29
SSX2IP-201ENST00000342203 RUSC1Q9BVN2 902 aa13.25□□□□□ -0.29
SSX2IP-201ENST00000342203 WWP1Q9H0M0 922 aa13.25□□□□□ -0.29
SSX2IP-201ENST00000342203 ABCB11O95342 1321 aa13.25□□□□□ -0.29
SSX2IP-201ENST00000342203 ADCY3O60266 1144 aa13.24□□□□□ -0.29
SSX2IP-201ENST00000342203 ZBED1O96006 694 aa13.24□□□□□ -0.29
SSX2IP-201ENST00000342203 ORC2Q13416 577 aaPredicted RBP13.24□□□□□ -0.29
SSX2IP-201ENST00000342203 PPP6R3Q5H9R7 873 aaPredicted RBP13.24□□□□□ -0.29
SSX2IP-201ENST00000342203 SYDE2Q5VT97 1194 aa13.24□□□□□ -0.29
SSX2IP-201ENST00000342203 MCUQ8NE86 351 aa13.24□□□□□ -0.29
SSX2IP-201ENST00000342203 MANSC1Q9H8J5 431 aa13.24□□□□□ -0.29
SSX2IP-201ENST00000342203 CCPG1Q9ULG6 757 aa13.24□□□□□ -0.29
SSX2IP-201ENST00000342203 HSPA4LO95757 839 aa13.24□□□□□ -0.29
SSX2IP-201ENST00000342203 KRT39Q6A163 491 aa13.24□□□□□ -0.29
SSX2IP-201ENST00000342203 CYFIP1Q7L576 1253 aa13.24□□□□□ -0.29
SSX2IP-201ENST00000342203 RNF217Q8TC41 542 aa13.24□□□□□ -0.29
SSX2IP-201ENST00000342203 NGRNQ9NPE2 291 aaKnown RBP13.24□□□□□ -0.29
SSX2IP-201ENST00000342203 ARMCX1Q9P291 453 aa13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms