RNA–Protein interactions for RNA: ENST00000340660.10

ATXN3-201, Transcript of ataxin 3, humanhuman

TSL 1 (best) BASIC

Gene ATXN3, Length 1,205 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-201ENST00000340660 TCF7P36402 384 aaPredicted RBP12.84□□□□□ -0.35
ATXN3-201ENST00000340660 SLC11A1P49279 550 aa12.84□□□□□ -0.35
ATXN3-201ENST00000340660 LRRC32Q14392 662 aa12.84□□□□□ -0.35
ATXN3-201ENST00000340660 NEDD9Q14511 834 aa12.84□□□□□ -0.35
ATXN3-201ENST00000340660 ELF2Q15723 593 aa12.84□□□□□ -0.35
ATXN3-201ENST00000340660 TANGO2Q6ICL3 276 aa12.84□□□□□ -0.35
ATXN3-201ENST00000340660 MCF2L2Q86YR7 1114 aa12.84□□□□□ -0.35
ATXN3-201ENST00000340660 SERBP1Q8NC51 408 aaKnown RBP eCLIP12.84□□□□□ -0.35
ATXN3-201ENST00000340660 TRIM4Q9C037 500 aa12.84□□□□□ -0.35
ATXN3-201ENST00000340660 DNAJB4Q9UDY4 337 aa12.84□□□□□ -0.35
ATXN3-201ENST00000340660 ZFHX3Q15911 3703 aa12.84□□□□□ -0.35
ATXN3-201ENST00000340660 USP9YO00507 2555 aaPredicted RBP12.83□□□□□ -0.35
ATXN3-201ENST00000340660 TGM5O43548 720 aa12.83□□□□□ -0.36
ATXN3-201ENST00000340660 SURF6O75683 361 aaKnown RBP12.83□□□□□ -0.36
ATXN3-201ENST00000340660 RHOBTB1O94844 696 aa12.83□□□□□ -0.36
ATXN3-201ENST00000340660 FTH1P19P0C7X4 201 aa12.83□□□□□ -0.36
ATXN3-201ENST00000340660 PRKCSHP14314 528 aaPredicted RBP12.83□□□□□ -0.36
ATXN3-201ENST00000340660 NOVP48745 357 aa12.83□□□□□ -0.36
ATXN3-201ENST00000340660 CENPCQ03188 943 aa12.83□□□□□ -0.36
ATXN3-201ENST00000340660 GIMAP6Q6P9H5 292 aa12.83□□□□□ -0.36
ATXN3-201ENST00000340660 TAS1R3Q7RTX0 852 aa12.83□□□□□ -0.36
ATXN3-201ENST00000340660 GPR155Q7Z3F1 870 aa12.83□□□□□ -0.36
ATXN3-201ENST00000340660 PALB2Q86YC2 1186 aa12.83□□□□□ -0.36
ATXN3-201ENST00000340660 MARCH9Q86YJ5 346 aa12.83□□□□□ -0.36
ATXN3-201ENST00000340660 NME8Q8N427 588 aa12.83□□□□□ -0.36
ATXN3-201ENST00000340660 STRBPQ96SI9 672 aaKnown RBP12.83□□□□□ -0.36
ATXN3-201ENST00000340660 ARID3AQ99856 593 aa12.83□□□□□ -0.36
ATXN3-201ENST00000340660 BRD9Q9H8M2 597 aa12.83□□□□□ -0.36
ATXN3-201ENST00000340660 ERAP1Q9NZ08 941 aa12.83□□□□□ -0.36
ATXN3-201ENST00000340660 DOLKQ9UPQ8 538 aa12.83□□□□□ -0.36
ATXN3-201ENST00000340660 MUC22E2RYF6 1773 aaPredicted RBP12.83□□□□□ -0.36
ATXN3-201ENST00000340660 NUP205Q92621 2012 aa12.83□□□□□ -0.36
ATXN3-201ENST00000340660 SMIM35A0A1B0GVV1 85 aa12.82□□□□□ -0.36
ATXN3-201ENST00000340660 RRN3P2A6NIE6 340 aa12.82□□□□□ -0.36
ATXN3-201ENST00000340660 OPLAHO14841 1288 aa12.82□□□□□ -0.36
ATXN3-201ENST00000340660 GAS2O43903 313 aaKnown RBP12.82□□□□□ -0.36
ATXN3-201ENST00000340660 HSD17B4P51659 736 aa12.82□□□□□ -0.36
ATXN3-201ENST00000340660 PLCB4Q15147 1175 aa12.82□□□□□ -0.36
ATXN3-201ENST00000340660 UBE3CQ15386 1083 aa12.82□□□□□ -0.36
ATXN3-201ENST00000340660 ODR4Q5SWX8 454 aa12.82□□□□□ -0.36
ATXN3-201ENST00000340660 PKN3Q6P5Z2 889 aa12.82□□□□□ -0.36
ATXN3-201ENST00000340660 STOX1Q6ZVD7 989 aa12.82□□□□□ -0.36
ATXN3-201ENST00000340660 TAS1R1Q7RTX1 841 aa12.82□□□□□ -0.36
ATXN3-201ENST00000340660 MAP4K3Q8IVH8 894 aa12.82□□□□□ -0.36
ATXN3-201ENST00000340660 PLEKHM2Q8IWE5 1019 aa12.82□□□□□ -0.36
ATXN3-201ENST00000340660 CPVLQ9H3G5 476 aa12.82□□□□□ -0.36
ATXN3-201ENST00000340660 RXFP1Q9HBX9 757 aa12.82□□□□□ -0.36
ATXN3-201ENST00000340660 ZNF334Q9HCZ1 680 aaPredicted RBP12.82□□□□□ -0.36
ATXN3-201ENST00000340660 PCDHA1Q9Y5I3 950 aa12.82□□□□□ -0.36
ATXN3-201ENST00000340660 KIF26AQ9ULI4 1882 aaPredicted RBP12.82□□□□□ -0.36
ATXN3-201ENST00000340660 ITPR2Q14571 2701 aa12.81□□□□□ -0.36
ATXN3-201ENST00000340660 TRABD2BA6NFA1 517 aa12.81□□□□□ -0.36
ATXN3-201ENST00000340660 CFBP00751 764 aa12.81□□□□□ -0.36
ATXN3-201ENST00000340660 URODP06132 367 aa12.81□□□□□ -0.36
ATXN3-201ENST00000340660 PDHBP11177 359 aa12.81□□□□□ -0.36
ATXN3-201ENST00000340660 C6P13671 934 aa12.81□□□□□ -0.36
ATXN3-201ENST00000340660 FCARP24071 287 aa12.81□□□□□ -0.36
ATXN3-201ENST00000340660 MCM6Q14566 821 aa12.81□□□□□ -0.36
ATXN3-201ENST00000340660 TAF1BQ53T94 588 aaPredicted RBP12.81□□□□□ -0.36
ATXN3-201ENST00000340660 LILRA6Q6PI73 481 aa12.81□□□□□ -0.36
ATXN3-201ENST00000340660 LYPD4Q6UWN0 246 aa12.81□□□□□ -0.36
ATXN3-201ENST00000340660 AACSQ86V21 672 aa12.81□□□□□ -0.36
ATXN3-201ENST00000340660 ING5Q8WYH8 240 aa12.81□□□□□ -0.36
ATXN3-201ENST00000340660 PPP1R16BQ96T49 567 aa12.81□□□□□ -0.36
ATXN3-201ENST00000340660 FZD8Q9H461 694 aa12.81□□□□□ -0.36
ATXN3-201ENST00000340660 TIMMDC1Q9NPL8 285 aa12.81□□□□□ -0.36
ATXN3-201ENST00000340660 TBC1D13Q9NVG8 400 aa12.81□□□□□ -0.36
ATXN3-201ENST00000340660 SETD2Q9BYW2 2564 aaPredicted RBP12.81□□□□□ -0.36
ATXN3-201ENST00000340660 PTPRBP23467 1997 aa12.8□□□□□ -0.36
ATXN3-201ENST00000340660 B4E1Z4 1266 aa12.8□□□□□ -0.36
ATXN3-201ENST00000340660 SOD2P04179 222 aa12.8□□□□□ -0.36
ATXN3-201ENST00000340660 GNAI2P04899 355 aa12.8□□□□□ -0.36
ATXN3-201ENST00000340660 CCND2P30279 289 aa12.8□□□□□ -0.36
ATXN3-201ENST00000340660 ABL2P42684 1182 aa12.8□□□□□ -0.36
ATXN3-201ENST00000340660 ZNF543Q08ER8 600 aa12.8□□□□□ -0.36
ATXN3-201ENST00000340660 LMAN2Q12907 356 aa12.8□□□□□ -0.36
ATXN3-201ENST00000340660 KRT25Q7Z3Z0 450 aa12.8□□□□□ -0.36
ATXN3-201ENST00000340660 GTPBP3Q969Y2 492 aaKnown RBP12.8□□□□□ -0.36
ATXN3-201ENST00000340660 ELSPBP1Q96BH3 223 aa12.8□□□□□ -0.36
ATXN3-201ENST00000340660 CAMK1GQ96NX5 476 aa12.8□□□□□ -0.36
ATXN3-201ENST00000340660 OSMRQ99650 979 aa12.8□□□□□ -0.36
ATXN3-201ENST00000340660 TRPV5Q9NQA5 729 aa12.8□□□□□ -0.36
ATXN3-201ENST00000340660 HSPBP1Q9NZL4 362 aa12.8□□□□□ -0.36
ATXN3-201ENST00000340660 EVLQ9UI08 416 aaPredicted RBP12.8□□□□□ -0.36
ATXN3-201ENST00000340660 MBD1Q9UIS9 605 aaPredicted RBP12.8□□□□□ -0.36
ATXN3-201ENST00000340660 POLQO75417 2590 aa12.8□□□□□ -0.36
ATXN3-201ENST00000340660 MTCL1Q9Y4B5 1905 aaKnown RBP12.8□□□□□ -0.36
ATXN3-201ENST00000340660 GSTTP1A0A1W2PQM5 241 aa12.79□□□□□ -0.36
ATXN3-201ENST00000340660 CARNS1A5YM72 827 aa12.79□□□□□ -0.36
ATXN3-201ENST00000340660 STAU1O95793 577 aaKnown RBP12.79□□□□□ -0.36
ATXN3-201ENST00000340660 KRT10P13645 584 aa12.79□□□□□ -0.36
ATXN3-201ENST00000340660 ENGP17813 658 aa12.79□□□□□ -0.36
ATXN3-201ENST00000340660 MRPS9P82933 396 aaKnown RBP12.79□□□□□ -0.36
ATXN3-201ENST00000340660 TRIP6Q15654 476 aaKnown RBP12.79□□□□□ -0.36
ATXN3-201ENST00000340660 CDC37Q16543 378 aaPredicted RBP12.79□□□□□ -0.36
ATXN3-201ENST00000340660 PDXDC1Q6P996 788 aa12.79□□□□□ -0.36
ATXN3-201ENST00000340660 SSH3Q8TE77 659 aa12.79□□□□□ -0.36
ATXN3-201ENST00000340660 INPP4AQ96PE3 977 aaPredicted RBP12.79□□□□□ -0.36
ATXN3-201ENST00000340660 HERC2P3Q9BVR0 1158 aa12.79□□□□□ -0.36
ATXN3-201ENST00000340660 STK39Q9UEW8 545 aa12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms