RNA–Protein interactions for RNA: ENST00000340611.8

BRAT1-201, Transcript of BRCA1 associated ATM activator 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BRAT1, Length 2,915 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAT1-201ENST00000340611 GAP43P17677 238 aa16.22■□□□□ 0.19
BRAT1-201ENST00000340611 CYP2J2P51589 502 aa16.22■□□□□ 0.19
BRAT1-201ENST00000340611 ZBED6P86452 979 aa16.22■□□□□ 0.19
BRAT1-201ENST00000340611 COBLL1Q53SF7 1204 aa16.22■□□□□ 0.19
BRAT1-201ENST00000340611 MIIPQ5JXC2 388 aa16.22■□□□□ 0.19
BRAT1-201ENST00000340611 HHATQ5VTY9 493 aa16.22■□□□□ 0.19
BRAT1-201ENST00000340611 NOC4LQ9BVI4 516 aaKnown RBP16.22■□□□□ 0.19
BRAT1-201ENST00000340611 IFIH1Q9BYX4 1025 aaKnown RBP16.22■□□□□ 0.19
BRAT1-201ENST00000340611 OSBPL7Q9BZF2 842 aa16.22■□□□□ 0.19
BRAT1-201ENST00000340611 MAF1Q9H063 256 aa16.22■□□□□ 0.19
BRAT1-201ENST00000340611 POLR3FQ9H1D9 316 aaPredicted RBP16.22■□□□□ 0.19
BRAT1-201ENST00000340611 PCDHB13Q9Y5F0 798 aa16.22■□□□□ 0.19
BRAT1-201ENST00000340611 COQ9O75208 318 aa16.22■□□□□ 0.19
BRAT1-201ENST00000340611 TACC1O75410 805 aa16.22■□□□□ 0.19
BRAT1-201ENST00000340611 ANP32DO95626 131 aa16.22■□□□□ 0.19
BRAT1-201ENST00000340611 CLTAP09496 248 aa16.22■□□□□ 0.19
BRAT1-201ENST00000340611 FAM163BP0C2L3 166 aa16.22■□□□□ 0.19
BRAT1-201ENST00000340611 PLS3P13797 630 aa16.22■□□□□ 0.19
BRAT1-201ENST00000340611 PSMC4P43686 418 aa16.22■□□□□ 0.19
BRAT1-201ENST00000340611 NPTX2P47972 431 aa16.22■□□□□ 0.19
BRAT1-201ENST00000340611 TM4SF4P48230 202 aa16.22■□□□□ 0.19
BRAT1-201ENST00000340611 EMC2Q15006 297 aa16.22■□□□□ 0.19
BRAT1-201ENST00000340611 ZIM3Q96PE6 472 aa16.22■□□□□ 0.19
BRAT1-201ENST00000340611 OSBPL9Q96SU4 736 aa16.22■□□□□ 0.19
BRAT1-201ENST00000340611 ZSCAN5CA6NGD5 496 aaPredicted RBP16.22■□□□□ 0.19
BRAT1-201ENST00000340611 LRRC63Q05C16 580 aa16.22■□□□□ 0.19
BRAT1-201ENST00000340611 PPP1R7Q15435 360 aa16.22■□□□□ 0.19
BRAT1-201ENST00000340611 HAUS6Q7Z4H7 955 aa16.22■□□□□ 0.19
BRAT1-201ENST00000340611 CCDC170Q8IYT3 715 aa16.22■□□□□ 0.19
BRAT1-201ENST00000340611 SYCP3Q8IZU3 236 aa16.22■□□□□ 0.19
BRAT1-201ENST00000340611 MS4A14Q96JA4 679 aa16.22■□□□□ 0.19
BRAT1-201ENST00000340611 LARSQ9P2J5 1176 aaKnown RBP16.22■□□□□ 0.19
BRAT1-201ENST00000340611 GJD2Q9UKL4 321 aa16.22■□□□□ 0.19
BRAT1-201ENST00000340611 DYNC1LI2O43237 492 aaPredicted RBP16.21■□□□□ 0.19
BRAT1-201ENST00000340611 CA12O43570 354 aa16.21■□□□□ 0.19
BRAT1-201ENST00000340611 GNAT1P11488 350 aa16.21■□□□□ 0.19
BRAT1-201ENST00000340611 FKBP3Q00688 224 aaKnown RBP16.21■□□□□ 0.19
BRAT1-201ENST00000340611 TRIM32Q13049 653 aa16.21■□□□□ 0.19
BRAT1-201ENST00000340611 TRIM58Q8NG06 486 aa16.21■□□□□ 0.19
BRAT1-201ENST00000340611 ASAP3Q8TDY4 903 aa16.21■□□□□ 0.19
BRAT1-201ENST00000340611 STIM2Q9P246 746 aa16.21■□□□□ 0.19
BRAT1-201ENST00000340611 DIS3Q9Y2L1 958 aaKnown RBP16.21■□□□□ 0.19
BRAT1-201ENST00000340611 ATXN2Q99700 1313 aaKnown RBP16.21■□□□□ 0.19
BRAT1-201ENST00000340611 EPHB6O15197 1021 aa16.21■□□□□ 0.18
BRAT1-201ENST00000340611 AKAP3O75969 853 aa16.21■□□□□ 0.18
BRAT1-201ENST00000340611 PTGISQ16647 500 aa16.21■□□□□ 0.18
BRAT1-201ENST00000340611 OLFML2BQ68BL8 750 aa16.21■□□□□ 0.18
BRAT1-201ENST00000340611 ZNF662Q6ZS27 426 aa16.21■□□□□ 0.18
BRAT1-201ENST00000340611 YTHDF3Q7Z739 585 aaKnown RBP16.21■□□□□ 0.18
BRAT1-201ENST00000340611 MMRN2Q9H8L6 949 aa16.21■□□□□ 0.18
BRAT1-201ENST00000340611 FAM207AQ9NSI2 230 aaPredicted RBP16.21■□□□□ 0.18
BRAT1-201ENST00000340611 RBM12Q9NTZ6 932 aaKnown RBP16.21■□□□□ 0.18
BRAT1-201ENST00000340611 CHCHD3Q9NX63 227 aaKnown RBP16.21■□□□□ 0.18
BRAT1-201ENST00000340611 KCND2Q9NZV8 630 aa16.21■□□□□ 0.18
BRAT1-201ENST00000340611 RTN3O95197 1032 aaPredicted RBP16.2■□□□□ 0.18
BRAT1-201ENST00000340611 ATP6V1G2O95670 118 aa16.2■□□□□ 0.18
BRAT1-201ENST00000340611 NR3C1P04150 777 aa16.2■□□□□ 0.18
BRAT1-201ENST00000340611 FAM153BP0C7A2 387 aa16.2■□□□□ 0.18
BRAT1-201ENST00000340611 EPHB4P54760 987 aa16.2■□□□□ 0.18
BRAT1-201ENST00000340611 PLCB4Q15147 1175 aa16.2■□□□□ 0.18
BRAT1-201ENST00000340611 FAM153CQ494X1 144 aa16.2■□□□□ 0.18
BRAT1-201ENST00000340611 IFT81Q8WYA0 676 aa16.2■□□□□ 0.18
BRAT1-201ENST00000340611 VTA1Q9NP79 307 aa16.2■□□□□ 0.18
BRAT1-201ENST00000340611 PDLIM7Q9NR12 457 aa16.2■□□□□ 0.18
BRAT1-201ENST00000340611 FAM153AQ9UHL3 310 aa16.2■□□□□ 0.18
BRAT1-201ENST00000340611 PCDHA13Q9Y5I0 950 aa16.2■□□□□ 0.18
BRAT1-201ENST00000340611 ZBTB42B2RXF5 422 aa16.2■□□□□ 0.18
BRAT1-201ENST00000340611 SMNDC1O75940 238 aaKnown RBP eCLIP16.2■□□□□ 0.18
BRAT1-201ENST00000340611 C8orf74Q6P047 294 aa16.2■□□□□ 0.18
BRAT1-201ENST00000340611 KCTD17Q8N5Z5 321 aa16.2■□□□□ 0.18
BRAT1-201ENST00000340611 FAM84AQ96KN4 292 aa16.2■□□□□ 0.18
BRAT1-201ENST00000340611 EPAS1Q99814 870 aa16.2■□□□□ 0.18
BRAT1-201ENST00000340611 CBWD1Q9BRT8 395 aa16.2■□□□□ 0.18
BRAT1-201ENST00000340611 ABHD16BQ9H3Z7 469 aa16.2■□□□□ 0.18
BRAT1-201ENST00000340611 ARHGAP20Q9P2F6 1191 aa16.2■□□□□ 0.18
BRAT1-201ENST00000340611 SALL4Q9UJQ4 1053 aa16.2■□□□□ 0.18
BRAT1-201ENST00000340611 DENND3A2RUS2 1198 aa16.19■□□□□ 0.18
BRAT1-201ENST00000340611 GOLGA8IPA6NC78 632 aa16.19■□□□□ 0.18
BRAT1-201ENST00000340611 GOLGA8JA6NMD2 632 aa16.19■□□□□ 0.18
BRAT1-201ENST00000340611 BUB1O43683 1085 aa16.19■□□□□ 0.18
BRAT1-201ENST00000340611 DIAPH2O60879 1101 aa16.19■□□□□ 0.18
BRAT1-201ENST00000340611 SMIM24O75264 130 aa16.19■□□□□ 0.18
BRAT1-201ENST00000340611 CSDE1O75534 798 aaKnown RBP16.19■□□□□ 0.18
BRAT1-201ENST00000340611 PPP1R37O75864 691 aa16.19■□□□□ 0.18
BRAT1-201ENST00000340611 DGAT1O75907 488 aa16.19■□□□□ 0.18
BRAT1-201ENST00000340611 LGALS2P05162 132 aa16.19■□□□□ 0.18
BRAT1-201ENST00000340611 EIF4A3P38919 411 aaKnown RBP16.19■□□□□ 0.18
BRAT1-201ENST00000340611 SCTRP47872 440 aa16.19■□□□□ 0.18
BRAT1-201ENST00000340611 CARSP49589 748 aaKnown RBP16.19■□□□□ 0.18
BRAT1-201ENST00000340611 GUCY2FP51841 1108 aa16.19■□□□□ 0.18
BRAT1-201ENST00000340611 BEX3Q00994 111 aa16.19■□□□□ 0.18
BRAT1-201ENST00000340611 FAM160B1Q5W0V3 765 aa16.19■□□□□ 0.18
BRAT1-201ENST00000340611 KMT5AQ9NQR1 393 aa16.19■□□□□ 0.18
BRAT1-201ENST00000340611 BATF3Q9NR55 127 aa16.19■□□□□ 0.18
BRAT1-201ENST00000340611 NFU1Q9UMS0 254 aa16.19■□□□□ 0.18
BRAT1-201ENST00000340611 ANKRD63C9JTQ0 380 aa16.19■□□□□ 0.18
BRAT1-201ENST00000340611 GH1P01241 217 aa16.19■□□□□ 0.18
BRAT1-201ENST00000340611 PAPOLAP51003 745 aaKnown RBP16.19■□□□□ 0.18
BRAT1-201ENST00000340611 SCNN1BP51168 640 aa16.19■□□□□ 0.18
BRAT1-201ENST00000340611 SKOR1P84550 965 aa16.19■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms