RNA–Protein interactions for RNA: ENST00000340157.8

VRK2-201, Transcript of vaccinia related kinase 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VRK2, Length 1,888 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK2-201ENST00000340157 PDZD7Q9H5P4 517 aa22.93■■□□□ 1.26
VRK2-201ENST00000340157 DNAI1Q9UI46 699 aa22.93■■□□□ 1.26
VRK2-201ENST00000340157 EVI5O60447 810 aa22.92■■□□□ 1.26
VRK2-201ENST00000340157 TSPAN1O60635 241 aa22.92■■□□□ 1.26
VRK2-201ENST00000340157 ADAMTS4O75173 837 aa22.92■■□□□ 1.26
VRK2-201ENST00000340157 TUBB4AP04350 444 aa22.92■■□□□ 1.26
VRK2-201ENST00000340157 HSP90AA2PQ14568 343 aaPredicted RBP22.92■■□□□ 1.26
VRK2-201ENST00000340157 ARHGAP29Q52LW3 1261 aa22.92■■□□□ 1.26
VRK2-201ENST00000340157 SCARA3Q6AZY7 606 aa22.92■■□□□ 1.26
VRK2-201ENST00000340157 TMEM192Q8IY95 271 aa22.92■■□□□ 1.26
VRK2-201ENST00000340157 HELQQ8TDG4 1101 aa22.92■■□□□ 1.26
VRK2-201ENST00000340157 PCDHA13Q9Y5I0 950 aa22.92■■□□□ 1.26
VRK2-201ENST00000340157 A0A087X0T9 212 aa22.92■■□□□ 1.26
VRK2-201ENST00000340157 FOXN3O00409 490 aaPredicted RBP22.92■■□□□ 1.26
VRK2-201ENST00000340157 VNN1O95497 513 aa22.92■■□□□ 1.26
VRK2-201ENST00000340157 FAM228BP0C875 321 aa22.92■■□□□ 1.26
VRK2-201ENST00000340157 VAV2P52735 878 aa22.92■■□□□ 1.26
VRK2-201ENST00000340157 GNG11P61952 73 aa22.92■■□□□ 1.26
VRK2-201ENST00000340157 SRGAP1Q7Z6B7 1085 aa22.92■■□□□ 1.26
VRK2-201ENST00000340157 THNSL1Q8IYQ7 743 aa22.92■■□□□ 1.26
VRK2-201ENST00000340157 KIF18AQ8NI77 898 aa22.92■■□□□ 1.26
VRK2-201ENST00000340157 SCLT1Q96NL6 688 aa22.92■■□□□ 1.26
VRK2-201ENST00000340157 PI4K2AQ9BTU6 479 aa22.92■■□□□ 1.26
VRK2-201ENST00000340157 MEFVO15553 781 aaPredicted RBP22.91■■□□□ 1.26
VRK2-201ENST00000340157 RARBP10826 455 aa22.91■■□□□ 1.26
VRK2-201ENST00000340157 FERP16591 822 aa22.91■■□□□ 1.26
VRK2-201ENST00000340157 FGFR4P22455 802 aa22.91■■□□□ 1.26
VRK2-201ENST00000340157 SPA17Q15506 151 aa22.91■■□□□ 1.26
VRK2-201ENST00000340157 CXCL17Q6UXB2 119 aa22.91■■□□□ 1.26
VRK2-201ENST00000340157 KIAA1328Q86T90 577 aa22.91■■□□□ 1.26
VRK2-201ENST00000340157 DNAJB3Q8WWF6 145 aa22.91■■□□□ 1.26
VRK2-201ENST00000340157 IFIH1Q9BYX4 1025 aaKnown RBP22.91■■□□□ 1.26
VRK2-201ENST00000340157 BZW2Q9Y6E2 419 aaKnown RBP22.91■■□□□ 1.26
VRK2-201ENST00000340157 IPO7O95373 1038 aaKnown RBP22.9■■□□□ 1.26
VRK2-201ENST00000340157 SLC18A3Q16572 532 aa22.9■■□□□ 1.26
VRK2-201ENST00000340157 TMEM132AQ24JP5 1023 aa22.9■■□□□ 1.26
VRK2-201ENST00000340157 MAP3K21Q5TCX8 1036 aa22.9■■□□□ 1.26
VRK2-201ENST00000340157 TATDN2Q93075 761 aa22.9■■□□□ 1.26
VRK2-201ENST00000340157 JAKMIP2Q96AA8 810 aa22.9■■□□□ 1.26
VRK2-201ENST00000340157 MTG1Q9BT17 334 aaPredicted RBP22.9■■□□□ 1.26
VRK2-201ENST00000340157 SYT11Q9BT88 431 aa22.9■■□□□ 1.26
VRK2-201ENST00000340157 ADAMTS1Q9UHI8 967 aa22.9■■□□□ 1.26
VRK2-201ENST00000340157 PAXBP1Q9Y5B6 917 aa22.9■■□□□ 1.26
VRK2-201ENST00000340157 DUSP10Q9Y6W6 482 aa22.9■■□□□ 1.26
VRK2-201ENST00000340157 C17orf102A2RUQ5 167 aa22.9■■□□□ 1.26
VRK2-201ENST00000340157 KPNA6O60684 536 aa22.9■■□□□ 1.26
VRK2-201ENST00000340157 HLA-DRAP01903 254 aa22.9■■□□□ 1.26
VRK2-201ENST00000340157 OSTNP61366 133 aa22.9■■□□□ 1.26
VRK2-201ENST00000340157 PPM1KQ8N3J5 372 aa22.9■■□□□ 1.26
VRK2-201ENST00000340157 NENFQ9UMX5 172 aa22.9■■□□□ 1.26
VRK2-201ENST00000340157 CITO14578 2027 aa22.89■■□□□ 1.26
VRK2-201ENST00000340157 C7orf31Q8N865 590 aa22.89■■□□□ 1.25
VRK2-201ENST00000340157 NT5C1BQ96P26 610 aa22.89■■□□□ 1.25
VRK2-201ENST00000340157 OSMRQ99650 979 aa22.89■■□□□ 1.25
VRK2-201ENST00000340157 XPNPEP3Q9NQH7 507 aa22.89■■□□□ 1.25
VRK2-201ENST00000340157 GUCA1BQ9UMX6 200 aa22.89■■□□□ 1.25
VRK2-201ENST00000340157 GINS2Q9Y248 185 aa22.89■■□□□ 1.25
VRK2-201ENST00000340157 TRIP11Q15643 1979 aa22.88■■□□□ 1.25
VRK2-201ENST00000340157 MCF2P10911 925 aa22.88■■□□□ 1.25
VRK2-201ENST00000340157 CCDC122Q5T0U0 273 aa22.88■■□□□ 1.25
VRK2-201ENST00000340157 WDR49Q8IV35 697 aa22.88■■□□□ 1.25
VRK2-201ENST00000340157 EFCAB13Q8IY85 973 aa22.88■■□□□ 1.25
VRK2-201ENST00000340157 KLHDC9Q8NEP7 349 aa22.88■■□□□ 1.25
VRK2-201ENST00000340157 A0A1B0GUA9 196 aa22.88■■□□□ 1.25
VRK2-201ENST00000340157 HMGCRP04035 888 aa22.88■■□□□ 1.25
VRK2-201ENST00000340157 CXCL8P10145 99 aa22.88■■□□□ 1.25
VRK2-201ENST00000340157 HOXA11P31270 313 aaPredicted RBP22.88■■□□□ 1.25
VRK2-201ENST00000340157 MAGEA1P43355 309 aa22.88■■□□□ 1.25
VRK2-201ENST00000340157 BIRC3Q13489 604 aa22.88■■□□□ 1.25
VRK2-201ENST00000340157 NBPF20Q3BBV1 942 aa22.88■■□□□ 1.25
VRK2-201ENST00000340157 CCSAPQ6IQ19 270 aaPredicted RBP22.88■■□□□ 1.25
VRK2-201ENST00000340157 TMEM40Q8WWA1 233 aa22.88■■□□□ 1.25
VRK2-201ENST00000340157 SHC3Q92529 594 aa22.88■■□□□ 1.25
VRK2-201ENST00000340157 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP22.88■■□□□ 1.25
VRK2-201ENST00000340157 MYH10P35580 1976 aa22.87■■□□□ 1.25
VRK2-201ENST00000340157 RIOK3O14730 519 aaKnown RBP22.87■■□□□ 1.25
VRK2-201ENST00000340157 KIF5CO60282 957 aa22.87■■□□□ 1.25
VRK2-201ENST00000340157 ZC3H11AO75152 810 aaKnown RBP eCLIP22.87■■□□□ 1.25
VRK2-201ENST00000340157 ERLIN2O94905 339 aa22.87■■□□□ 1.25
VRK2-201ENST00000340157 DARSP14868 501 aaKnown RBP22.87■■□□□ 1.25
VRK2-201ENST00000340157 HOXD10P28358 340 aa22.87■■□□□ 1.25
VRK2-201ENST00000340157 PIK3CAP42336 1068 aa22.87■■□□□ 1.25
VRK2-201ENST00000340157 ZNF569Q5MCW4 686 aa22.87■■□□□ 1.25
VRK2-201ENST00000340157 FAM71AQ8IYT1 594 aa22.87■■□□□ 1.25
VRK2-201ENST00000340157 LNX1Q8TBB1 728 aaPredicted RBP22.87■■□□□ 1.25
VRK2-201ENST00000340157 FAM212AQ96EL1 285 aa22.87■■□□□ 1.25
VRK2-201ENST00000340157 GCOM2Q9BZD3 368 aaPredicted RBP22.87■■□□□ 1.25
VRK2-201ENST00000340157 MTMR12Q9C0I1 747 aa22.87■■□□□ 1.25
VRK2-201ENST00000340157 SPC25Q9HBM1 224 aa22.87■■□□□ 1.25
VRK2-201ENST00000340157 APOBEC3GQ9HC16 384 aaKnown RBP22.87■■□□□ 1.25
VRK2-201ENST00000340157 DDX3XO00571 662 aaKnown RBP eCLIP22.86■■□□□ 1.252e-11■□□□□ 11.2
VRK2-201ENST00000340157 STAG3L1P0CL83 205 aa22.86■■□□□ 1.25
VRK2-201ENST00000340157 CDC42EP1Q00587 391 aa22.86■■□□□ 1.25
VRK2-201ENST00000340157 SPOPLQ6IQ16 392 aa22.86■■□□□ 1.25
VRK2-201ENST00000340157 SLC35F6Q8N357 371 aa22.86■■□□□ 1.25
VRK2-201ENST00000340157 SLC30A5Q8TAD4 765 aa22.86■■□□□ 1.25
VRK2-201ENST00000340157 VTI1AQ96AJ9 217 aa22.86■■□□□ 1.25
VRK2-201ENST00000340157 ARID3AQ99856 593 aa22.86■■□□□ 1.25
VRK2-201ENST00000340157 GTF2IRD1Q9UHL9 959 aa22.86■■□□□ 1.25
VRK2-201ENST00000340157 FRMPD3Q5JV73 1810 aa22.86■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms