RNA–Protein interactions for RNA: ENST00000339598.7

OTOF-203, Transcript of otoferlin, humanhuman

TSL 1 (best) BASIC

Gene OTOF, Length 4,756 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
OTOF-203ENST00000339598 TRIM66O15016 1216 aa13.2□□□□□ -0.3
OTOF-203ENST00000339598 TBX3O15119 743 aa13.2□□□□□ -0.3
OTOF-203ENST00000339598 RAD51CO43502 376 aa13.2□□□□□ -0.3
OTOF-203ENST00000339598 KCNJ1P48048 391 aa13.2□□□□□ -0.3
OTOF-203ENST00000339598 ARHGEF6Q15052 776 aa13.2□□□□□ -0.3
OTOF-203ENST00000339598 LONRF1Q17RB8 773 aa13.2□□□□□ -0.3
OTOF-203ENST00000339598 FASTKD1Q53R41 847 aaKnown RBP13.2□□□□□ -0.3
OTOF-203ENST00000339598 SYCP2LQ5T4T6 812 aa13.2□□□□□ -0.3
OTOF-203ENST00000339598 FRA10AC1Q70Z53 315 aa13.2□□□□□ -0.3
OTOF-203ENST00000339598 ANO5Q75V66 913 aa13.2□□□□□ -0.3
OTOF-203ENST00000339598 TEX2Q8IWB9 1127 aa13.2□□□□□ -0.3
OTOF-203ENST00000339598 ACAP3Q96P50 834 aa13.2□□□□□ -0.3
OTOF-203ENST00000339598 SARS2Q9NP81 518 aaKnown RBP13.2□□□□□ -0.3
OTOF-203ENST00000339598 LMCD1Q9NZU5 365 aa13.2□□□□□ -0.3
OTOF-203ENST00000339598 CHN1P15882 459 aa13.19□□□□□ -0.3
OTOF-203ENST00000339598 ITIH2P19823 946 aa13.19□□□□□ -0.3
OTOF-203ENST00000339598 KLK7P49862 253 aa13.19□□□□□ -0.3
OTOF-203ENST00000339598 IRAK1P51617 712 aa13.19□□□□□ -0.3
OTOF-203ENST00000339598 HMGCS2P54868 508 aa13.19□□□□□ -0.3
OTOF-203ENST00000339598 BAATQ14032 418 aaPredicted RBP13.19□□□□□ -0.3
OTOF-203ENST00000339598 XKR3Q5GH77 459 aa13.19□□□□□ -0.3
OTOF-203ENST00000339598 NYAP1Q6ZVC0 841 aa13.19□□□□□ -0.3
OTOF-203ENST00000339598 OSBPL1AQ9BXW6 950 aa13.19□□□□□ -0.3
OTOF-203ENST00000339598 TMEM117Q9H0C3 514 aa13.19□□□□□ -0.3
OTOF-203ENST00000339598 HPCAL4Q9UM19 191 aa13.19□□□□□ -0.3
OTOF-203ENST00000339598 ALG6Q9Y672 507 aa13.19□□□□□ -0.3
OTOF-203ENST00000339598 PHF2O75151 1096 aa13.19□□□□□ -0.3
OTOF-203ENST00000339598 PDGFRAP16234 1089 aa13.19□□□□□ -0.3
OTOF-203ENST00000339598 SEC24CP53992 1094 aa13.19□□□□□ -0.3
OTOF-203ENST00000339598 TROAPQ12815 778 aa13.19□□□□□ -0.3
OTOF-203ENST00000339598 SNRNP35Q16560 246 aaKnown RBP13.19□□□□□ -0.3
OTOF-203ENST00000339598 ITPRIPL1Q6GPH6 555 aa13.19□□□□□ -0.3
OTOF-203ENST00000339598 C4orf33Q8N1A6 199 aa13.19□□□□□ -0.3
OTOF-203ENST00000339598 CYFIP2Q96F07 1278 aa13.19□□□□□ -0.3
OTOF-203ENST00000339598 LSP1P33241 339 aa13.19□□□□□ -0.3
OTOF-203ENST00000339598 KYNUQ16719 465 aa13.19□□□□□ -0.3
OTOF-203ENST00000339598 P3H1Q32P28 736 aa13.19□□□□□ -0.3
OTOF-203ENST00000339598 TMEM143Q96AN5 459 aa13.19□□□□□ -0.3
OTOF-203ENST00000339598 LBHD1Q9BQE6 289 aaPredicted RBP13.19□□□□□ -0.3
OTOF-203ENST00000339598 GCOM2Q9BZD3 368 aaPredicted RBP13.19□□□□□ -0.3
OTOF-203ENST00000339598 RPAP3Q9H6T3 665 aaPredicted RBP13.19□□□□□ -0.3
OTOF-203ENST00000339598 YY1AP1Q9H869 796 aa13.19□□□□□ -0.3
OTOF-203ENST00000339598 RAB6BQ9NRW1 208 aa13.19□□□□□ -0.3
OTOF-203ENST00000339598 ZKSCAN7Q9P0L1 754 aaPredicted RBP13.19□□□□□ -0.3
OTOF-203ENST00000339598 SLC8A2Q9UPR5 921 aa13.19□□□□□ -0.3
OTOF-203ENST00000339598 CNTNAP5Q8WYK1 1306 aa13.19□□□□□ -0.3
OTOF-203ENST00000339598 CDC42BPGQ6DT37 1551 aa13.19□□□□□ -0.3
OTOF-203ENST00000339598 H3BRJ5 948 aa13.19□□□□□ -0.3
OTOF-203ENST00000339598 PGM1P36871 562 aa13.19□□□□□ -0.3
OTOF-203ENST00000339598 KDSRQ06136 332 aa13.19□□□□□ -0.3
OTOF-203ENST00000339598 JAMLQ86YT9 394 aa13.19□□□□□ -0.3
OTOF-203ENST00000339598 OTUD5Q96G74 571 aa13.19□□□□□ -0.3
OTOF-203ENST00000339598 POLR3CQ9BUI4 534 aaPredicted RBP13.19□□□□□ -0.3
OTOF-203ENST00000339598 SLC24A3Q9HC58 644 aa13.19□□□□□ -0.3
OTOF-203ENST00000339598 TARBP1Q13395 1621 aaKnown RBP13.18□□□□□ -0.3
OTOF-203ENST00000339598 PPP1R3GB7ZBB8 358 aa13.18□□□□□ -0.3
OTOF-203ENST00000339598 ZFXP17010 805 aaPredicted RBP13.18□□□□□ -0.3
OTOF-203ENST00000339598 RECQLP46063 649 aaPredicted RBP13.18□□□□□ -0.3
OTOF-203ENST00000339598 EFTUD2Q15029 972 aaKnown RBP eCLIP13.18□□□□□ -0.3
OTOF-203ENST00000339598 FBXW10Q5XX13 1052 aa13.18□□□□□ -0.3
OTOF-203ENST00000339598 NDUFAF2Q8N183 169 aa13.18□□□□□ -0.3
OTOF-203ENST00000339598 OSBPL8Q9BZF1 889 aa13.18□□□□□ -0.3
OTOF-203ENST00000339598 SLC13A4Q9UKG4 626 aa13.18□□□□□ -0.3
OTOF-203ENST00000339598 PRR12Q9ULL5 1215 aa13.18□□□□□ -0.3
OTOF-203ENST00000339598 TRPM1Q7Z4N2 1603 aa13.18□□□□□ -0.3
OTOF-203ENST00000339598 PREX2Q70Z35 1606 aa13.18□□□□□ -0.3
OTOF-203ENST00000339598 ARHGDIAP52565 204 aa13.18□□□□□ -0.3
OTOF-203ENST00000339598 MTM1Q13496 603 aa13.18□□□□□ -0.3
OTOF-203ENST00000339598 RAPGEF5Q92565 580 aa13.18□□□□□ -0.3
OTOF-203ENST00000339598 ZIM3Q96PE6 472 aa13.18□□□□□ -0.3
OTOF-203ENST00000339598 XPO6Q96QU8 1125 aaKnown RBP13.18□□□□□ -0.3
OTOF-203ENST00000339598 ERGIC2Q96RQ1 377 aa13.18□□□□□ -0.3
OTOF-203ENST00000339598 CELF4Q9BZC1 486 aaKnown RBP13.18□□□□□ -0.3
OTOF-203ENST00000339598 NYAP2Q9P242 653 aa13.18□□□□□ -0.3
OTOF-203ENST00000339598 POLIQ9UNA4 740 aa13.18□□□□□ -0.3
OTOF-203ENST00000339598 SMG5Q9UPR3 1016 aaKnown RBP13.18□□□□□ -0.3
OTOF-203ENST00000339598 TET3O43151 1660 aa13.18□□□□□ -0.3
OTOF-203ENST00000339598 F8W8V4 182 aa13.18□□□□□ -0.3
OTOF-203ENST00000339598 PIK3R2O00459 728 aa13.18□□□□□ -0.3
OTOF-203ENST00000339598 KCNN4O15554 427 aa13.18□□□□□ -0.3
OTOF-203ENST00000339598 COMTP21964 271 aa13.18□□□□□ -0.3
OTOF-203ENST00000339598 NCOA4Q13772 614 aa13.18□□□□□ -0.3
OTOF-203ENST00000339598 CAPRIN1Q14444 709 aaKnown RBP13.18□□□□□ -0.3
OTOF-203ENST00000339598 RCOR2Q8IZ40 523 aa13.18□□□□□ -0.3
OTOF-203ENST00000339598 AGAP3Q96P47 875 aa13.18□□□□□ -0.3
OTOF-203ENST00000339598 MRPL40Q9NQ50 206 aaKnown RBP13.18□□□□□ -0.3
OTOF-203ENST00000339598 FAM8A1Q9UBU6 413 aa13.18□□□□□ -0.3
OTOF-203ENST00000339598 PLAGL2Q9UPG8 496 aa13.18□□□□□ -0.3
OTOF-203ENST00000339598 AGAP1Q9UPQ3 857 aa13.18□□□□□ -0.3
OTOF-203ENST00000339598 PDS5AQ29RF7 1337 aaKnown RBP13.18□□□□□ -0.3
OTOF-203ENST00000339598 FOXP2O15409 715 aa13.17□□□□□ -0.3
OTOF-203ENST00000339598 PRKCBP05771 671 aa13.17□□□□□ -0.3
OTOF-203ENST00000339598 MCF2P10911 925 aa13.17□□□□□ -0.3
OTOF-203ENST00000339598 RPA1P27694 616 aa13.17□□□□□ -0.3
OTOF-203ENST00000339598 TEDDM1Q5T9Z0 273 aa13.17□□□□□ -0.3
OTOF-203ENST00000339598 SYDE1Q6ZW31 735 aaPredicted RBP13.17□□□□□ -0.3
OTOF-203ENST00000339598 NEU2Q9Y3R4 380 aa13.17□□□□□ -0.3
OTOF-203ENST00000339598 USP15Q9Y4E8 981 aaPredicted RBP13.17□□□□□ -0.3
OTOF-203ENST00000339598 ADCY10Q96PN6 1610 aa13.17□□□□□ -0.3
OTOF-203ENST00000339598 HECW2Q9P2P5 1572 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms