RNA–Protein interactions for RNA: ENST00000338602.6

SLC28A1-202, Transcript of solute carrier family 28 member 1, humanhuman

TSL 1 (best) BASIC

Gene SLC28A1, Length 1,360 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A1-202ENST00000338602 CIZ1Q9ULV3 898 aaPredicted RBP12.37□□□□□ -0.43
SLC28A1-202ENST00000338602 FAM50BQ9Y247 325 aa12.37□□□□□ -0.43
SLC28A1-202ENST00000338602 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP12.36□□□□□ -0.43
SLC28A1-202ENST00000338602 A0A1B0GVL5 298 aa12.36□□□□□ -0.43
SLC28A1-202ENST00000338602 A0A1W2PQ27 194 aa12.36□□□□□ -0.43
SLC28A1-202ENST00000338602 A0A1W2PQ64 194 aa12.36□□□□□ -0.43
SLC28A1-202ENST00000338602 A0A1W2PQD8 194 aa12.36□□□□□ -0.43
SLC28A1-202ENST00000338602 FRMD3A2A2Y4 597 aa12.36□□□□□ -0.43
SLC28A1-202ENST00000338602 OGTO15294 1046 aa12.36□□□□□ -0.43
SLC28A1-202ENST00000338602 SLFN14P0C7P3 912 aa12.36□□□□□ -0.43
SLC28A1-202ENST00000338602 CTSAP10619 480 aa12.36□□□□□ -0.43
SLC28A1-202ENST00000338602 SYKP43405 635 aa12.36□□□□□ -0.43
SLC28A1-202ENST00000338602 NDUFV1P49821 464 aa12.36□□□□□ -0.43
SLC28A1-202ENST00000338602 HSP90AA2PQ14568 343 aaPredicted RBP12.36□□□□□ -0.43
SLC28A1-202ENST00000338602 PUS10Q3MIT2 529 aaKnown RBP12.36□□□□□ -0.43
SLC28A1-202ENST00000338602 ZC2HC1CQ53FD0 456 aaPredicted RBP12.36□□□□□ -0.43
SLC28A1-202ENST00000338602 L1TD1Q5T7N2 865 aaKnown RBP12.36□□□□□ -0.43
SLC28A1-202ENST00000338602 KIAA1841Q6NSI8 718 aa12.36□□□□□ -0.43
SLC28A1-202ENST00000338602 CNNM4Q6P4Q7 775 aa12.36□□□□□ -0.43
SLC28A1-202ENST00000338602 EFHBQ8N7U6 833 aa12.36□□□□□ -0.43
SLC28A1-202ENST00000338602 CEP120Q8N960 986 aa12.36□□□□□ -0.43
SLC28A1-202ENST00000338602 MRPL43Q8N983 215 aaKnown RBP12.36□□□□□ -0.43
SLC28A1-202ENST00000338602 DDX27Q96GQ7 796 aaKnown RBP12.36□□□□□ -0.43
SLC28A1-202ENST00000338602 TSPAN18Q96SJ8 248 aa12.36□□□□□ -0.43
SLC28A1-202ENST00000338602 FIZ1Q96SL8 496 aa12.36□□□□□ -0.43
SLC28A1-202ENST00000338602 MSTO1Q9BUK6 570 aa12.36□□□□□ -0.43
SLC28A1-202ENST00000338602 EMILIN2Q9BXX0 1053 aa12.36□□□□□ -0.43
SLC28A1-202ENST00000338602 PLEKHA5Q9HAU0 1116 aa12.36□□□□□ -0.43
SLC28A1-202ENST00000338602 TBC1D7Q9P0N9 293 aa12.36□□□□□ -0.43
SLC28A1-202ENST00000338602 ABLIM1O14639 778 aa12.35□□□□□ -0.43
SLC28A1-202ENST00000338602 PTGESO14684 152 aa12.35□□□□□ -0.43
SLC28A1-202ENST00000338602 XPOTO43592 962 aaKnown RBP12.35□□□□□ -0.43
SLC28A1-202ENST00000338602 SOD2P04179 222 aa12.35□□□□□ -0.43
SLC28A1-202ENST00000338602 MYL1P05976 194 aa12.35□□□□□ -0.43
SLC28A1-202ENST00000338602 URODP06132 367 aa12.35□□□□□ -0.43
SLC28A1-202ENST00000338602 PFKFB1P16118 471 aa12.35□□□□□ -0.43
SLC28A1-202ENST00000338602 KCNA5P22460 613 aa12.35□□□□□ -0.43
SLC28A1-202ENST00000338602 AFMP43652 599 aa12.35□□□□□ -0.43
SLC28A1-202ENST00000338602 ELAVL2Q12926 359 aaKnown RBP12.35□□□□□ -0.43
SLC28A1-202ENST00000338602 COASYQ13057 564 aa12.35□□□□□ -0.43
SLC28A1-202ENST00000338602 DUSP6Q16828 381 aa12.35□□□□□ -0.43
SLC28A1-202ENST00000338602 UNC13DQ70J99 1090 aa12.35□□□□□ -0.43
SLC28A1-202ENST00000338602 TMEM173Q86WV6 379 aaPredicted RBP12.35□□□□□ -0.43
SLC28A1-202ENST00000338602 CD302Q8IX05 232 aa12.35□□□□□ -0.43
SLC28A1-202ENST00000338602 POMGNT1Q8WZA1 660 aa12.35□□□□□ -0.43
SLC28A1-202ENST00000338602 CCDC47Q96A33 483 aaKnown RBP12.35□□□□□ -0.43
SLC28A1-202ENST00000338602 ZBP1Q9H171 429 aa12.35□□□□□ -0.43
SLC28A1-202ENST00000338602 RPF1Q9H9Y2 349 aaKnown RBP12.35□□□□□ -0.43
SLC28A1-202ENST00000338602 MRPL17Q9NRX2 175 aaKnown RBP12.35□□□□□ -0.43
SLC28A1-202ENST00000338602 SERTAD1Q9UHV2 236 aa12.35□□□□□ -0.43
SLC28A1-202ENST00000338602 ADAM28Q9UKQ2 775 aa12.35□□□□□ -0.43
SLC28A1-202ENST00000338602 SF3B1O75533 1304 aaKnown RBP eCLIP12.35□□□□□ -0.43
SLC28A1-202ENST00000338602 MYO7AQ13402 2215 aa12.35□□□□□ -0.43
SLC28A1-202ENST00000338602 A0A0B4J269 797 aa12.34□□□□□ -0.43
SLC28A1-202ENST00000338602 SMIM28A0A1B0GU29 152 aa12.34□□□□□ -0.43
SLC28A1-202ENST00000338602 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP12.34□□□□□ -0.43
SLC28A1-202ENST00000338602 PVALEFA0A1B0GWK0 134 aa12.34□□□□□ -0.43
SLC28A1-202ENST00000338602 C2orf71A6NGG8 1288 aa12.34□□□□□ -0.43
SLC28A1-202ENST00000338602 CASTOR2A6NHX0 329 aa12.34□□□□□ -0.43
SLC28A1-202ENST00000338602 PER2O15055 1255 aa12.34□□□□□ -0.43
SLC28A1-202ENST00000338602 TRAPPC3O43617 180 aa12.34□□□□□ -0.43
SLC28A1-202ENST00000338602 B4GALT3O60512 393 aa12.34□□□□□ -0.43
SLC28A1-202ENST00000338602 KCNE1P15382 129 aa12.34□□□□□ -0.43
SLC28A1-202ENST00000338602 TFF2Q03403 129 aa12.34□□□□□ -0.43
SLC28A1-202ENST00000338602 PPP2R3AQ06190 1150 aa12.34□□□□□ -0.43
SLC28A1-202ENST00000338602 ADAM15Q13444 863 aa12.34□□□□□ -0.43
SLC28A1-202ENST00000338602 COL19A1Q14993 1142 aa12.34□□□□□ -0.43
SLC28A1-202ENST00000338602 CTC1Q2NKJ3 1217 aa12.34□□□□□ -0.43
SLC28A1-202ENST00000338602 USP41Q3LFD5 358 aa12.34□□□□□ -0.43
SLC28A1-202ENST00000338602 LEXMQ3ZCV2 418 aa12.34□□□□□ -0.43
SLC28A1-202ENST00000338602 TPRNQ4KMQ1 711 aa12.34□□□□□ -0.43
SLC28A1-202ENST00000338602 XKR4Q5GH76 650 aa12.34□□□□□ -0.43
SLC28A1-202ENST00000338602 GLRA4Q5JXX5 417 aa12.34□□□□□ -0.43
SLC28A1-202ENST00000338602 FAM26FQ5R3K3 315 aa12.34□□□□□ -0.43
SLC28A1-202ENST00000338602 DCLRE1AQ6PJP8 1040 aa12.34□□□□□ -0.43
SLC28A1-202ENST00000338602 ALKAL1Q6UXT8 129 aa12.34□□□□□ -0.43
SLC28A1-202ENST00000338602 ADGRD2Q7Z7M1 963 aa12.34□□□□□ -0.43
SLC28A1-202ENST00000338602 PPFIBP1Q86W92 1011 aa12.34□□□□□ -0.43
SLC28A1-202ENST00000338602 FSIP1Q8NA03 581 aa12.34□□□□□ -0.43
SLC28A1-202ENST00000338602 BCL7CQ8WUZ0 217 aaPredicted RBP12.34□□□□□ -0.43
SLC28A1-202ENST00000338602 PPP1R10Q96QC0 940 aaKnown RBP12.34□□□□□ -0.43
SLC28A1-202ENST00000338602 HERC2P3Q9BVR0 1158 aa12.34□□□□□ -0.43
SLC28A1-202ENST00000338602 CNTN3Q9P232 1028 aa12.34□□□□□ -0.43
SLC28A1-202ENST00000338602 AGO2Q9UKV8 859 aaKnown RBP12.34□□□□□ -0.43
SLC28A1-202ENST00000338602 IRAK3Q9Y616 596 aa12.34□□□□□ -0.43
SLC28A1-202ENST00000338602 PLXNA4Q9HCM2 1894 aa12.34□□□□□ -0.43
SLC28A1-202ENST00000338602 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.33□□□□□ -0.44
SLC28A1-202ENST00000338602 FAM237AA0A1B0GTK4 181 aa12.33□□□□□ -0.44
SLC28A1-202ENST00000338602 HIDE1A8MVS5 230 aa12.33□□□□□ -0.44
SLC28A1-202ENST00000338602 EIF3DO15371 548 aaKnown RBP eCLIP12.33□□□□□ -0.44
SLC28A1-202ENST00000338602 PPP1R37O75864 691 aa12.33□□□□□ -0.44
SLC28A1-202ENST00000338602 B3GAT3O94766 335 aa12.33□□□□□ -0.44
SLC28A1-202ENST00000338602 LDHAP00338 332 aaKnown RBP12.33□□□□□ -0.44
SLC28A1-202ENST00000338602 MYBP10242 640 aa12.33□□□□□ -0.44
SLC28A1-202ENST00000338602 RPL9P32969 192 aaKnown RBP12.33□□□□□ -0.44
SLC28A1-202ENST00000338602 GLUD2P49448 558 aa12.33□□□□□ -0.44
SLC28A1-202ENST00000338602 POU5F1Q01860 360 aaKnown RBP12.33□□□□□ -0.44
SLC28A1-202ENST00000338602 CREMQ03060 361 aa12.33□□□□□ -0.44
SLC28A1-202ENST00000338602 SLC10A6Q3KNW5 377 aa12.33□□□□□ -0.44
SLC28A1-202ENST00000338602 SEZ6Q53EL9 994 aa12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 105.4 ms