RNA–Protein interactions for RNA: ENST00000334060.8

SHOX-201, Transcript of short stature homeobox, humanhuman

TSL 5 BASIC

Gene SHOX, Length 1,951 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX-201ENST00000334060 FILIP1Q7Z7B0 1213 aa17.95■□□□□ 0.46
SHOX-201ENST00000334060 CRIPAKQ8N1N5 446 aa17.95■□□□□ 0.46
SHOX-201ENST00000334060 C18orf25Q96B23 403 aaPredicted RBP17.95■□□□□ 0.46
SHOX-201ENST00000334060 GAD1Q99259 594 aa17.95■□□□□ 0.46
SHOX-201ENST00000334060 ADPGKQ9BRR6 497 aa17.95■□□□□ 0.46
SHOX-201ENST00000334060 PTGESO14684 152 aa17.95■□□□□ 0.46
SHOX-201ENST00000334060 TEX33O43247 280 aa17.95■□□□□ 0.46
SHOX-201ENST00000334060 CAPN2P17655 700 aa17.95■□□□□ 0.46
SHOX-201ENST00000334060 GRM5P41594 1212 aa17.95■□□□□ 0.46
SHOX-201ENST00000334060 KLK7P49862 253 aa17.95■□□□□ 0.46
SHOX-201ENST00000334060 PLCB2Q00722 1185 aa17.95■□□□□ 0.46
SHOX-201ENST00000334060 SOX4Q06945 474 aaPredicted RBP17.95■□□□□ 0.46
SHOX-201ENST00000334060 MTERF4Q7Z6M4 381 aaKnown RBP17.95■□□□□ 0.46
SHOX-201ENST00000334060 TRIM59Q8IWR1 403 aa17.95■□□□□ 0.46
SHOX-201ENST00000334060 TMEM199Q8N511 208 aa17.95■□□□□ 0.46
SHOX-201ENST00000334060 SLC35C1Q96A29 364 aa17.95■□□□□ 0.46
SHOX-201ENST00000334060 MFSD14AQ96MC6 490 aa17.95■□□□□ 0.46
SHOX-201ENST00000334060 GTPBP4Q9BZE4 634 aaKnown RBP17.95■□□□□ 0.46
SHOX-201ENST00000334060 THAP9Q9H5L6 903 aa17.95■□□□□ 0.46
SHOX-201ENST00000334060 PRKAG2Q9UGJ0 569 aa17.95■□□□□ 0.46
SHOX-201ENST00000334060 F8W810 466 aa17.94■□□□□ 0.46
SHOX-201ENST00000334060 PSMC2P35998 433 aaKnown RBP17.94■□□□□ 0.46
SHOX-201ENST00000334060 MAGEA10P43363 369 aaPredicted RBP17.94■□□□□ 0.46
SHOX-201ENST00000334060 FPGSQ05932 587 aa17.94■□□□□ 0.46
SHOX-201ENST00000334060 TMEM240Q5SV17 173 aa17.94■□□□□ 0.46
SHOX-201ENST00000334060 JADE1Q6IE81 842 aa17.94■□□□□ 0.46
SHOX-201ENST00000334060 BRSK2Q8IWQ3 736 aa17.94■□□□□ 0.46
SHOX-201ENST00000334060 ZNF710Q8N1W2 664 aa17.94■□□□□ 0.46
SHOX-201ENST00000334060 GOLGA5Q8TBA6 731 aa17.94■□□□□ 0.46
SHOX-201ENST00000334060 PARD3BQ8TEW8 1205 aa17.94■□□□□ 0.46
SHOX-201ENST00000334060 CEP63Q96MT8 703 aa17.94■□□□□ 0.46
SHOX-201ENST00000334060 IL23AQ9NPF7 189 aa17.94■□□□□ 0.46
SHOX-201ENST00000334060 CHST12Q9NRB3 414 aa17.94■□□□□ 0.46
SHOX-201ENST00000334060 TUBGCP4Q9UGJ1 667 aa17.94■□□□□ 0.46
SHOX-201ENST00000334060 INPP5FQ9Y2H2 1132 aa17.94■□□□□ 0.46
SHOX-201ENST00000334060 TTC26A0AVF1 554 aa17.93■□□□□ 0.46
SHOX-201ENST00000334060 PPEF2O14830 753 aa17.93■□□□□ 0.46
SHOX-201ENST00000334060 GCLMP48507 274 aa17.93■□□□□ 0.46
SHOX-201ENST00000334060 SCNN1GP51170 649 aa17.93■□□□□ 0.46
SHOX-201ENST00000334060 WDR5P61964 334 aaKnown RBP17.93■□□□□ 0.46
SHOX-201ENST00000334060 BFSP1Q12934 665 aa17.93■□□□□ 0.46
SHOX-201ENST00000334060 DCAF4L1Q3SXM0 396 aa17.93■□□□□ 0.46
SHOX-201ENST00000334060 CT47A1Q5JQC4 288 aaPredicted RBP17.93■□□□□ 0.46
SHOX-201ENST00000334060 TCERG1LQ5VWI1 586 aa17.93■□□□□ 0.46
SHOX-201ENST00000334060 FAM109BQ6ICB4 259 aaPredicted RBP17.93■□□□□ 0.46
SHOX-201ENST00000334060 CNKSR3Q6P9H4 555 aa17.93■□□□□ 0.46
SHOX-201ENST00000334060 HELQQ8TDG4 1101 aa17.93■□□□□ 0.46
SHOX-201ENST00000334060 SNX27Q96L92 541 aa17.93■□□□□ 0.46
SHOX-201ENST00000334060 PAAF1Q9BRP4 392 aa17.93■□□□□ 0.46
SHOX-201ENST00000334060 FRMD4BQ9Y2L6 1034 aa17.93■□□□□ 0.46
SHOX-201ENST00000334060 SZT2Q5T011 3432 aa17.93■□□□□ 0.46
SHOX-201ENST00000334060 ZNF233A6NK53 670 aa17.93■□□□□ 0.46
SHOX-201ENST00000334060 POMCP01189 267 aa17.93■□□□□ 0.46
SHOX-201ENST00000334060 RPL13P26373 211 aaKnown RBP17.93■□□□□ 0.46
SHOX-201ENST00000334060 NCBP1Q09161 790 aaKnown RBP17.93■□□□□ 0.46
SHOX-201ENST00000334060 PCBP1Q15365 356 aaKnown RBP eCLIP17.93■□□□□ 0.46
SHOX-201ENST00000334060 SLC24A5Q71RS6 500 aa17.93■□□□□ 0.46
SHOX-201ENST00000334060 TMEM174Q8WUU8 243 aa17.93■□□□□ 0.46
SHOX-201ENST00000334060 ACAP3Q96P50 834 aa17.93■□□□□ 0.46
SHOX-201ENST00000334060 TUBGCP2Q9BSJ2 902 aa17.93■□□□□ 0.46
SHOX-201ENST00000334060 MTMR12Q9C0I1 747 aa17.93■□□□□ 0.46
SHOX-201ENST00000334060 TTC3P53804 2025 aa17.93■□□□□ 0.46
SHOX-201ENST00000334060 SMTNL1A8MU46 457 aa17.92■□□□□ 0.46
SHOX-201ENST00000334060 GOLGA6L19H0YKK7 550 aa17.92■□□□□ 0.46
SHOX-201ENST00000334060 EPB41P11171 864 aaKnown RBP17.92■□□□□ 0.46
SHOX-201ENST00000334060 SCP2P22307 547 aa17.92■□□□□ 0.46
SHOX-201ENST00000334060 ABCD1P33897 745 aa17.92■□□□□ 0.46
SHOX-201ENST00000334060 MTIF2P46199 727 aaKnown RBP17.92■□□□□ 0.46
SHOX-201ENST00000334060 VAMP7P51809 220 aa17.92■□□□□ 0.46
SHOX-201ENST00000334060 FAM189BP81408 668 aa17.92■□□□□ 0.46
SHOX-201ENST00000334060 FANCCQ00597 558 aa17.92■□□□□ 0.46
SHOX-201ENST00000334060 ALKAL1Q6UXT8 129 aa17.92■□□□□ 0.46
SHOX-201ENST00000334060 SPRED2Q7Z698 418 aa17.92■□□□□ 0.46
SHOX-201ENST00000334060 CRACR2AQ9BSW2 395 aa17.92■□□□□ 0.46
SHOX-201ENST00000334060 RPF1Q9H9Y2 349 aaKnown RBP17.92■□□□□ 0.46
SHOX-201ENST00000334060 ARMCX3Q9UH62 379 aaPredicted RBP17.92■□□□□ 0.46
SHOX-201ENST00000334060 CITO14578 2027 aa17.92■□□□□ 0.46
SHOX-201ENST00000334060 ARL5CA6NH57 179 aa17.91■□□□□ 0.46
SHOX-201ENST00000334060 H0YGN5 161 aa17.91■□□□□ 0.46
SHOX-201ENST00000334060 SLC16A3O15427 465 aaKnown RBP17.91■□□□□ 0.46
SHOX-201ENST00000334060 CLTAP09496 248 aa17.91■□□□□ 0.46
SHOX-201ENST00000334060 ITGA4P13612 1032 aa17.91■□□□□ 0.46
SHOX-201ENST00000334060 PBX3P40426 434 aa17.91■□□□□ 0.46
SHOX-201ENST00000334060 COPB1P53618 953 aaKnown RBP17.91■□□□□ 0.46
SHOX-201ENST00000334060 HS1BP3Q53T59 392 aa17.91■□□□□ 0.46
SHOX-201ENST00000334060 FOXR2Q6PJQ5 311 aa17.91■□□□□ 0.46
SHOX-201ENST00000334060 MRPL10Q7Z7H8 261 aaKnown RBP17.91■□□□□ 0.46
SHOX-201ENST00000334060 IFNKQ9P0W0 207 aa17.91■□□□□ 0.46
SHOX-201ENST00000334060 CGNQ9P2M7 1197 aaKnown RBP17.91■□□□□ 0.46
SHOX-201ENST00000334060 ZBBXA8MT70 800 aa17.91■□□□□ 0.46
SHOX-201ENST00000334060 CDK11BP21127 795 aaKnown RBP17.91■□□□□ 0.46
SHOX-201ENST00000334060 MARSP56192 900 aaKnown RBP17.91■□□□□ 0.46
SHOX-201ENST00000334060 SNRPFP62306 86 aaKnown RBP17.91■□□□□ 0.46
SHOX-201ENST00000334060 PSMD6Q15008 389 aa17.91■□□□□ 0.46
SHOX-201ENST00000334060 NAB2Q15742 525 aa17.91■□□□□ 0.46
SHOX-201ENST00000334060 PAN2Q504Q3 1202 aaKnown RBP17.91■□□□□ 0.46
SHOX-201ENST00000334060 GPIHBP1Q8IV16 184 aa17.91■□□□□ 0.46
SHOX-201ENST00000334060 ANP32BQ92688 251 aaKnown RBP17.91■□□□□ 0.46
SHOX-201ENST00000334060 SEMA4DQ92854 862 aa17.91■□□□□ 0.46
SHOX-201ENST00000334060 CCDC94Q9BW85 323 aaPredicted RBP17.91■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 61.6 ms