RNA–Protein interactions for RNA: ENST00000330045.11

BRCC3-201, Transcript of BRCA1/BRCA2-containing complex subunit 3, humanhuman

TSL 1 (best) BASIC

Gene BRCC3, Length 2,496 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3-201ENST00000330045 EXOC7Q9UPT5 735 aa16.46■□□□□ 0.23
BRCC3-201ENST00000330045 RASGRF2O14827 1237 aa16.45■□□□□ 0.22
BRCC3-201ENST00000330045 ECEL1O95672 775 aa16.45■□□□□ 0.22
BRCC3-201ENST00000330045 SLCO1A2P46721 670 aa16.45■□□□□ 0.22
BRCC3-201ENST00000330045 GPC3P51654 580 aa16.45■□□□□ 0.22
BRCC3-201ENST00000330045 CALCOCO2Q13137 446 aa16.45■□□□□ 0.22
BRCC3-201ENST00000330045 UGCGQ16739 394 aa16.45■□□□□ 0.22
BRCC3-201ENST00000330045 CHADLQ6NUI6 762 aa16.45■□□□□ 0.22
BRCC3-201ENST00000330045 DLK2Q6UY11 383 aa16.45■□□□□ 0.22
BRCC3-201ENST00000330045 NSMFQ6X4W1 530 aa16.45■□□□□ 0.22
BRCC3-201ENST00000330045 MCF2L2Q86YR7 1114 aa16.45■□□□□ 0.22
BRCC3-201ENST00000330045 C4orf19Q8IY42 314 aa16.45■□□□□ 0.22
BRCC3-201ENST00000330045 CCDC197Q8NCU1 140 aa16.45■□□□□ 0.22
BRCC3-201ENST00000330045 SLC17A8Q8NDX2 589 aa16.45■□□□□ 0.22
BRCC3-201ENST00000330045 SAAL1Q96ER3 474 aa16.45■□□□□ 0.22
BRCC3-201ENST00000330045 POP1Q99575 1024 aaKnown RBP16.45■□□□□ 0.22
BRCC3-201ENST00000330045 KDM4CQ9H3R0 1056 aa16.45■□□□□ 0.22
BRCC3-201ENST00000330045 LRRC19Q9H756 370 aa16.45■□□□□ 0.22
BRCC3-201ENST00000330045 TMEM8AQ9HCN3 771 aa16.45■□□□□ 0.22
BRCC3-201ENST00000330045 TBC1D22BQ9NU19 505 aa16.45■□□□□ 0.22
BRCC3-201ENST00000330045 COQ4Q9Y3A0 265 aa16.45■□□□□ 0.22
BRCC3-201ENST00000330045 ASAP2O43150 1006 aa16.45■□□□□ 0.22
BRCC3-201ENST00000330045 TBC1D12O60347 775 aa16.45■□□□□ 0.22
BRCC3-201ENST00000330045 SCTRP47872 440 aa16.45■□□□□ 0.22
BRCC3-201ENST00000330045 PPP1R7Q15435 360 aa16.45■□□□□ 0.22
BRCC3-201ENST00000330045 FKBP1CQ5VVH2 108 aa16.45■□□□□ 0.22
BRCC3-201ENST00000330045 CCDC25Q86WR0 208 aa16.45■□□□□ 0.22
BRCC3-201ENST00000330045 KIFAP3Q92845 792 aa16.45■□□□□ 0.22
BRCC3-201ENST00000330045 NT5C1BQ96P26 610 aa16.45■□□□□ 0.22
BRCC3-201ENST00000330045 PLVAPQ9BX97 442 aa16.45■□□□□ 0.22
BRCC3-201ENST00000330045 TBX20Q9UMR3 447 aa16.45■□□□□ 0.22
BRCC3-201ENST00000330045 CNGA1P29973 690 aa16.44■□□□□ 0.22
BRCC3-201ENST00000330045 AUHQ13825 339 aaKnown RBP16.44■□□□□ 0.22
BRCC3-201ENST00000330045 XKR9Q5GH70 373 aa16.44■□□□□ 0.22
BRCC3-201ENST00000330045 TNFAIP8L3Q5GJ75 292 aa16.44■□□□□ 0.22
BRCC3-201ENST00000330045 ACAD10Q6JQN1 1059 aa16.44■□□□□ 0.22
BRCC3-201ENST00000330045 ANKS4BQ8N8V4 417 aa16.44■□□□□ 0.22
BRCC3-201ENST00000330045 TRPM4Q8TD43 1214 aa16.44■□□□□ 0.22
BRCC3-201ENST00000330045 CLDN3O15551 220 aa16.44■□□□□ 0.22
BRCC3-201ENST00000330045 ATP2C2O75185 946 aa16.44■□□□□ 0.22
BRCC3-201ENST00000330045 DLATP10515 647 aaKnown RBP16.44■□□□□ 0.22
BRCC3-201ENST00000330045 GHRP10912 638 aa16.44■□□□□ 0.22
BRCC3-201ENST00000330045 PSMC5P62195 406 aa16.44■□□□□ 0.22
BRCC3-201ENST00000330045 NBPF12Q5TAG4 269 aaPredicted RBP16.44■□□□□ 0.22
BRCC3-201ENST00000330045 TAOK1Q7L7X3 1001 aa16.44■□□□□ 0.22
BRCC3-201ENST00000330045 TMEM161BQ8NDZ6 487 aa16.44■□□□□ 0.22
BRCC3-201ENST00000330045 FBXL13Q8NEE6 735 aa16.44■□□□□ 0.22
BRCC3-201ENST00000330045 PSPC1Q8WXF1 523 aaKnown RBP16.44■□□□□ 0.22
BRCC3-201ENST00000330045 DDX1Q92499 740 aaKnown RBP16.44■□□□□ 0.22
BRCC3-201ENST00000330045 HVCN1Q96D96 273 aa16.44■□□□□ 0.22
BRCC3-201ENST00000330045 PRMT1Q99873 361 aaKnown RBP16.44■□□□□ 0.22
BRCC3-201ENST00000330045 ROPN1BQ9BZX4 212 aaPredicted RBP16.44■□□□□ 0.22
BRCC3-201ENST00000330045 ROPN1Q9HAT0 212 aaPredicted RBP16.44■□□□□ 0.22
BRCC3-201ENST00000330045 RAB20Q9NX57 234 aa16.44■□□□□ 0.22
BRCC3-201ENST00000330045 FSCN2O14926 492 aa16.43■□□□□ 0.22
BRCC3-201ENST00000330045 GHRHRQ02643 423 aa16.43■□□□□ 0.22
BRCC3-201ENST00000330045 LLGL1Q15334 1064 aa16.43■□□□□ 0.22
BRCC3-201ENST00000330045 SGO2Q562F6 1265 aa16.43■□□□□ 0.22
BRCC3-201ENST00000330045 PLA2G4FQ68DD2 849 aa16.43■□□□□ 0.22
BRCC3-201ENST00000330045 TRMT10CQ7L0Y3 403 aaKnown RBP16.43■□□□□ 0.22
BRCC3-201ENST00000330045 PIGWQ7Z7B1 504 aa16.43■□□□□ 0.22
BRCC3-201ENST00000330045 MAP4K3Q8IVH8 894 aa16.43■□□□□ 0.22
BRCC3-201ENST00000330045 LRRC34Q8IZ02 419 aa16.43■□□□□ 0.22
BRCC3-201ENST00000330045 CPXCR1Q8N123 301 aa16.43■□□□□ 0.22
BRCC3-201ENST00000330045 TAS1R2Q8TE23 839 aa16.43■□□□□ 0.22
BRCC3-201ENST00000330045 FHDC1Q9C0D6 1143 aaPredicted RBP16.43■□□□□ 0.22
BRCC3-201ENST00000330045 CCDC113Q9H0I3 377 aa16.43■□□□□ 0.22
BRCC3-201ENST00000330045 CCDC134Q9H6E4 229 aa16.43■□□□□ 0.22
BRCC3-201ENST00000330045 CCT8L1PA6NM43 557 aa16.43■□□□□ 0.22
BRCC3-201ENST00000330045 GRIN3BO60391 1043 aa16.43■□□□□ 0.22
BRCC3-201ENST00000330045 MFSD5Q6N075 450 aa16.43■□□□□ 0.22
BRCC3-201ENST00000330045 TAX1BP1Q86VP1 789 aa16.43■□□□□ 0.22
BRCC3-201ENST00000330045 FUKQ8N0W3 1084 aa16.43■□□□□ 0.22
BRCC3-201ENST00000330045 SYTL5Q8TDW5 730 aaPredicted RBP16.43■□□□□ 0.22
BRCC3-201ENST00000330045 IPO4Q8TEX9 1081 aaKnown RBP16.43■□□□□ 0.22
BRCC3-201ENST00000330045 C1orf54Q8WWF1 131 aa16.43■□□□□ 0.22
BRCC3-201ENST00000330045 DHX38Q92620 1227 aaKnown RBP16.43■□□□□ 0.22
BRCC3-201ENST00000330045 SLCO2A1Q92959 643 aa16.43■□□□□ 0.22
BRCC3-201ENST00000330045 KIFC3Q9BVG8 833 aa16.43■□□□□ 0.22
BRCC3-201ENST00000330045 TOPORSQ9NS56 1045 aaPredicted RBP16.43■□□□□ 0.22
BRCC3-201ENST00000330045 WHRNQ9P202 907 aa16.43■□□□□ 0.22
BRCC3-201ENST00000330045 ZNFX1Q9P2E3 1918 aaKnown RBP16.43■□□□□ 0.22
BRCC3-201ENST00000330045 CHUKO15111 745 aa16.42■□□□□ 0.22
BRCC3-201ENST00000330045 ASNSP08243 561 aa16.42■□□□□ 0.22
BRCC3-201ENST00000330045 EIF2AK2P19525 551 aaKnown RBP16.42■□□□□ 0.22
BRCC3-201ENST00000330045 NPTX2P47972 431 aa16.42■□□□□ 0.22
BRCC3-201ENST00000330045 KRT17Q04695 432 aa16.42■□□□□ 0.22
BRCC3-201ENST00000330045 TMC2Q8TDI7 906 aa16.42■□□□□ 0.22
BRCC3-201ENST00000330045 TAAR1Q96RJ0 339 aa16.42■□□□□ 0.22
BRCC3-201ENST00000330045 JPH2Q9BR39 696 aaPredicted RBP16.42■□□□□ 0.22
BRCC3-201ENST00000330045 CDC42EP4Q9H3Q1 356 aaKnown RBP16.42■□□□□ 0.22
BRCC3-201ENST00000330045 ANKEF1Q9NU02 776 aa16.42■□□□□ 0.22
BRCC3-201ENST00000330045 HAUS2Q9NVX0 235 aa16.42■□□□□ 0.22
BRCC3-201ENST00000330045 SAMD15Q9P1V8 674 aa16.42■□□□□ 0.22
BRCC3-201ENST00000330045 TCEAL9Q9UHQ7 104 aa16.42■□□□□ 0.22
BRCC3-201ENST00000330045 LTBP3Q9NS15 1303 aa16.42■□□□□ 0.22
BRCC3-201ENST00000330045 DENND3A2RUS2 1198 aa16.42■□□□□ 0.22
BRCC3-201ENST00000330045 ATP9AO75110 1047 aa16.42■□□□□ 0.22
BRCC3-201ENST00000330045 MAPK4P31152 587 aa16.42■□□□□ 0.22
BRCC3-201ENST00000330045 DMP1Q13316 513 aaPredicted RBP16.42■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms