RNA–Protein interactions for RNA: ENST00000329397.5

PTP4A3-201, Transcript of protein tyrosine phosphatase type IVA, member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTP4A3, Length 2,785 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A3-201ENST00000329397 TMEM120BA0PK00 339 aa18.59■□□□□ 0.57
PTP4A3-201ENST00000329397 TCP11X1B4DZS4 312 aa18.59■□□□□ 0.57
PTP4A3-201ENST00000329397 ENTPD3O75355 529 aa18.59■□□□□ 0.57
PTP4A3-201ENST00000329397 RAD17O75943 681 aa18.59■□□□□ 0.57
PTP4A3-201ENST00000329397 CLTAP09496 248 aa18.59■□□□□ 0.57
PTP4A3-201ENST00000329397 PDE6CP51160 858 aa18.59■□□□□ 0.57
PTP4A3-201ENST00000329397 MRPS9P82933 396 aaKnown RBP18.59■□□□□ 0.57
PTP4A3-201ENST00000329397 LACTB2Q53H82 288 aaPredicted RBP18.59■□□□□ 0.57
PTP4A3-201ENST00000329397 PIGWQ7Z7B1 504 aa18.59■□□□□ 0.57
PTP4A3-201ENST00000329397 ANKS4BQ8N8V4 417 aa18.59■□□□□ 0.57
PTP4A3-201ENST00000329397 HELQQ8TDG4 1101 aa18.59■□□□□ 0.57
PTP4A3-201ENST00000329397 CHURC1Q8WUH1 139 aa18.59■□□□□ 0.57
PTP4A3-201ENST00000329397 SHC3Q92529 594 aa18.59■□□□□ 0.57
PTP4A3-201ENST00000329397 ARHGEF2Q92974 986 aaKnown RBP18.59■□□□□ 0.57
PTP4A3-201ENST00000329397 PPIP5K2O43314 1243 aa18.58■□□□□ 0.56
PTP4A3-201ENST00000329397 SPDYCQ5MJ68 293 aa18.58■□□□□ 0.56
PTP4A3-201ENST00000329397 PSPC1Q8WXF1 523 aaKnown RBP18.58■□□□□ 0.56
PTP4A3-201ENST00000329397 HSPA6P17066 643 aa18.58■□□□□ 0.56
PTP4A3-201ENST00000329397 QARSP47897 775 aaKnown RBP18.58■□□□□ 0.56
PTP4A3-201ENST00000329397 SP4Q02446 784 aa18.58■□□□□ 0.56
PTP4A3-201ENST00000329397 XKR9Q5GH70 373 aa18.58■□□□□ 0.56
PTP4A3-201ENST00000329397 KDM4CQ9H3R0 1056 aa18.58■□□□□ 0.56
PTP4A3-201ENST00000329397 EHMT1Q9H9B1 1298 aa18.58■□□□□ 0.56
PTP4A3-201ENST00000329397 TELO2Q9Y4R8 837 aa18.58■□□□□ 0.56
PTP4A3-201ENST00000329397 ASTN2O75129 1339 aaPredicted RBP18.57■□□□□ 0.56
PTP4A3-201ENST00000329397 CYP1A2P05177 515 aa18.57■□□□□ 0.56
PTP4A3-201ENST00000329397 ELF3P78545 371 aaPredicted RBP18.57■□□□□ 0.56
PTP4A3-201ENST00000329397 XRCC4Q13426 336 aa18.57■□□□□ 0.56
PTP4A3-201ENST00000329397 MPP2Q14168 576 aa18.57■□□□□ 0.56
PTP4A3-201ENST00000329397 TKFCQ3LXA3 575 aa18.57■□□□□ 0.56
PTP4A3-201ENST00000329397 FMNL3Q8IVF7 1028 aa18.57■□□□□ 0.56
PTP4A3-201ENST00000329397 RIT2Q99578 217 aa18.57■□□□□ 0.56
PTP4A3-201ENST00000329397 MRIQ9BWK5 157 aa18.57■□□□□ 0.56
PTP4A3-201ENST00000329397 UBOX5O94941 541 aa18.57■□□□□ 0.56
PTP4A3-201ENST00000329397 GJB6O95452 261 aa18.57■□□□□ 0.56
PTP4A3-201ENST00000329397 CNGA1P29973 690 aa18.57■□□□□ 0.56
PTP4A3-201ENST00000329397 MTMR1Q13613 665 aa18.57■□□□□ 0.56
PTP4A3-201ENST00000329397 SLMAPQ14BN4 828 aa18.57■□□□□ 0.56
PTP4A3-201ENST00000329397 CYP1B1Q16678 543 aa18.57■□□□□ 0.56
PTP4A3-201ENST00000329397 TRPM8Q7Z2W7 1104 aa18.57■□□□□ 0.56
PTP4A3-201ENST00000329397 PASD1Q8IV76 773 aa18.57■□□□□ 0.56
PTP4A3-201ENST00000329397 CYP4X1Q8N118 509 aa18.57■□□□□ 0.56
PTP4A3-201ENST00000329397 KCTD17Q8N5Z5 321 aa18.57■□□□□ 0.56
PTP4A3-201ENST00000329397 BSNDQ8WZ55 320 aa18.57■□□□□ 0.56
PTP4A3-201ENST00000329397 KLHL11Q9NVR0 708 aa18.57■□□□□ 0.56
PTP4A3-201ENST00000329397 PARP2Q9UGN5 583 aa18.57■□□□□ 0.56
PTP4A3-201ENST00000329397 CNOT7Q9UIV1 285 aaKnown RBP18.57■□□□□ 0.56
PTP4A3-201ENST00000329397 GTF3C4Q9UKN8 822 aa18.57■□□□□ 0.56
PTP4A3-201ENST00000329397 CFHP08603 1231 aa18.56■□□□□ 0.56
PTP4A3-201ENST00000329397 CETPP11597 493 aa18.56■□□□□ 0.56
PTP4A3-201ENST00000329397 GZMAP12544 262 aa18.56■□□□□ 0.56
PTP4A3-201ENST00000329397 RRM1P23921 792 aa18.56■□□□□ 0.56
PTP4A3-201ENST00000329397 MAPK4P31152 587 aa18.56■□□□□ 0.56
PTP4A3-201ENST00000329397 ITGA8P53708 1063 aa18.56■□□□□ 0.56
PTP4A3-201ENST00000329397 MFAP3P55082 362 aa18.56■□□□□ 0.56
PTP4A3-201ENST00000329397 KIF2BQ8N4N8 673 aa18.56■□□□□ 0.56
PTP4A3-201ENST00000329397 PARD3BQ8TEW8 1205 aa18.56■□□□□ 0.56
PTP4A3-201ENST00000329397 THOC1Q96FV9 657 aaKnown RBP18.56■□□□□ 0.56
PTP4A3-201ENST00000329397 ADAM33Q9BZ11 813 aa18.56■□□□□ 0.56
PTP4A3-201ENST00000329397 TAOK3Q9H2K8 898 aa18.56■□□□□ 0.56
PTP4A3-201ENST00000329397 RAVER2Q9HCJ3 691 aaKnown RBP18.56■□□□□ 0.56
PTP4A3-201ENST00000329397 AGO4Q9HCK5 861 aaKnown RBP18.56■□□□□ 0.56
PTP4A3-201ENST00000329397 ZNF536O15090 1300 aa18.56■□□□□ 0.56
PTP4A3-201ENST00000329397 DENND3A2RUS2 1198 aa18.56■□□□□ 0.56
PTP4A3-201ENST00000329397 KCNJ2P63252 427 aa18.56■□□□□ 0.56
PTP4A3-201ENST00000329397 GTF2BQ00403 316 aa18.56■□□□□ 0.56
PTP4A3-201ENST00000329397 CDR2Q01850 454 aa18.56■□□□□ 0.56
PTP4A3-201ENST00000329397 HP1BP3Q5SSJ5 553 aaPredicted RBP18.56■□□□□ 0.56
PTP4A3-201ENST00000329397 NUGGCQ68CJ6 796 aa18.56■□□□□ 0.56
PTP4A3-201ENST00000329397 KRT39Q6A163 491 aa18.56■□□□□ 0.56
PTP4A3-201ENST00000329397 VSTM1Q6UX27 236 aa18.56■□□□□ 0.56
PTP4A3-201ENST00000329397 CCDC50Q8IVM0 306 aa18.56■□□□□ 0.56
PTP4A3-201ENST00000329397 KIRREL3Q8IZU9 778 aa18.56■□□□□ 0.56
PTP4A3-201ENST00000329397 ZNF513Q8N8E2 541 aaPredicted RBP18.56■□□□□ 0.56
PTP4A3-201ENST00000329397 POMGNT1Q8WZA1 660 aa18.56■□□□□ 0.56
PTP4A3-201ENST00000329397 DDX1Q92499 740 aaKnown RBP18.56■□□□□ 0.56
PTP4A3-201ENST00000329397 DONSONQ9NYP3 566 aa18.56■□□□□ 0.56
PTP4A3-201ENST00000329397 TMOD2Q9NZR1 351 aa18.56■□□□□ 0.56
PTP4A3-201ENST00000329397 ASAP2O43150 1006 aa18.55■□□□□ 0.56
PTP4A3-201ENST00000329397 GRIN3BO60391 1043 aa18.55■□□□□ 0.56
PTP4A3-201ENST00000329397 GSCP56915 257 aaPredicted RBP18.55■□□□□ 0.56
PTP4A3-201ENST00000329397 SLC39A4Q6P5W5 647 aa18.55■□□□□ 0.56
PTP4A3-201ENST00000329397 C9orf72Q96LT7 481 aa18.55■□□□□ 0.56
PTP4A3-201ENST00000329397 TAAR1Q96RJ0 339 aa18.55■□□□□ 0.56
PTP4A3-201ENST00000329397 HERC5Q9UII4 1024 aaKnown RBP18.55■□□□□ 0.56
PTP4A3-201ENST00000329397 NPTX2P47972 431 aa18.55■□□□□ 0.56
PTP4A3-201ENST00000329397 SPOPLQ6IQ16 392 aa18.55■□□□□ 0.56
PTP4A3-201ENST00000329397 SV2AQ7L0J3 742 aa18.55■□□□□ 0.56
PTP4A3-201ENST00000329397 CCDC63Q8NA47 563 aa18.55■□□□□ 0.56
PTP4A3-201ENST00000329397 NT5C1BQ96P26 610 aa18.55■□□□□ 0.56
PTP4A3-201ENST00000329397 TBX20Q9UMR3 447 aa18.55■□□□□ 0.56
PTP4A3-201ENST00000329397 SPDYE2BA6NHP3 402 aa18.54■□□□□ 0.56
PTP4A3-201ENST00000329397 NPM3O75607 178 aaKnown RBP18.54■□□□□ 0.56
PTP4A3-201ENST00000329397 MTA2O94776 668 aa18.54■□□□□ 0.56
PTP4A3-201ENST00000329397 CCNE2O96020 404 aa18.54■□□□□ 0.56
PTP4A3-201ENST00000329397 RPSAP08865 295 aaKnown RBP18.54■□□□□ 0.56
PTP4A3-201ENST00000329397 SPDYE6P0CI01 402 aa18.54■□□□□ 0.56
PTP4A3-201ENST00000329397 CXorf56Q9H5V9 222 aa18.54■□□□□ 0.56
PTP4A3-201ENST00000329397 RAB20Q9NX57 234 aa18.54■□□□□ 0.56
PTP4A3-201ENST00000329397 PNMA3Q9UL41 463 aa18.54■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms