RNA–Protein interactions for RNA: ENST00000324862.6

PRPF3-201, Transcript of pre-mRNA processing factor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRPF3, Length 2,433 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF3-201ENST00000324862 RPLP2P05387 115 aaKnown RBP16.57■□□□□ 0.24
PRPF3-201ENST00000324862 TPM2P07951 284 aa16.57■□□□□ 0.24
PRPF3-201ENST00000324862 RBL2Q08999 1139 aa16.57■□□□□ 0.24
PRPF3-201ENST00000324862 PCBP1Q15365 356 aaKnown RBP eCLIP16.57■□□□□ 0.241e-7■■■■■ 43.7
PRPF3-201ENST00000324862 DEFB128Q7Z7B8 93 aa16.57■□□□□ 0.24
PRPF3-201ENST00000324862 DBF4BQ8NFT6 615 aa16.57■□□□□ 0.24
PRPF3-201ENST00000324862 LINC01599Q8WXQ3 324 aa16.57■□□□□ 0.24
PRPF3-201ENST00000324862 TRIM43Q96BQ3 446 aaPredicted RBP16.57■□□□□ 0.24
PRPF3-201ENST00000324862 FNBP1Q96RU3 617 aa16.57■□□□□ 0.24
PRPF3-201ENST00000324862 RPF1Q9H9Y2 349 aaKnown RBP16.57■□□□□ 0.24
PRPF3-201ENST00000324862 SIK3Q9Y2K2 1263 aa16.57■□□□□ 0.24
PRPF3-201ENST00000324862 PCDHB2Q9Y5E7 798 aa16.57■□□□□ 0.24
PRPF3-201ENST00000324862 KIAA0391O15091 583 aaKnown RBP16.57■□□□□ 0.24
PRPF3-201ENST00000324862 CAND2O75155 1236 aa16.57■□□□□ 0.24
PRPF3-201ENST00000324862 RECQL4O94761 1208 aa16.57■□□□□ 0.24
PRPF3-201ENST00000324862 NFICP08651 508 aa16.57■□□□□ 0.24
PRPF3-201ENST00000324862 CLTBP09497 229 aa16.57■□□□□ 0.24
PRPF3-201ENST00000324862 AXLP30530 894 aa16.57■□□□□ 0.24
PRPF3-201ENST00000324862 FKBP15Q5T1M5 1219 aa16.57■□□□□ 0.24
PRPF3-201ENST00000324862 SV2AQ7L0J3 742 aa16.57■□□□□ 0.24
PRPF3-201ENST00000324862 RNF169Q8NCN4 708 aa16.57■□□□□ 0.24
PRPF3-201ENST00000324862 PCMTD1Q96MG8 357 aaPredicted RBP16.57■□□□□ 0.24
PRPF3-201ENST00000324862 ACAP3Q96P50 834 aa16.57■□□□□ 0.24
PRPF3-201ENST00000324862 SEZ6LQ9BYH1 1024 aa16.57■□□□□ 0.24
PRPF3-201ENST00000324862 FAM105AQ9NUU6 356 aa16.57■□□□□ 0.24
PRPF3-201ENST00000324862 PITPNM1O00562 1244 aa16.56■□□□□ 0.24
PRPF3-201ENST00000324862 TPM3P06753 285 aa16.56■□□□□ 0.24
PRPF3-201ENST00000324862 CLTAP09496 248 aa16.56■□□□□ 0.24
PRPF3-201ENST00000324862 GRM5P41594 1212 aa16.56■□□□□ 0.24
PRPF3-201ENST00000324862 GUCY2FP51841 1108 aa16.56■□□□□ 0.24
PRPF3-201ENST00000324862 DCAF4L1Q3SXM0 396 aa16.56■□□□□ 0.24
PRPF3-201ENST00000324862 SPECC1LQ69YQ0 1117 aa16.56■□□□□ 0.24
PRPF3-201ENST00000324862 TAS1R2Q8TE23 839 aa16.56■□□□□ 0.24
PRPF3-201ENST00000324862 SEMA4DQ92854 862 aa16.56■□□□□ 0.24
PRPF3-201ENST00000324862 ZMAT2Q96NC0 199 aaKnown RBP16.56■□□□□ 0.24
PRPF3-201ENST00000324862 MTMR12Q9C0I1 747 aa16.56■□□□□ 0.24
PRPF3-201ENST00000324862 TET1Q8NFU7 2136 aa16.56■□□□□ 0.24
PRPF3-201ENST00000324862 ZSCAN20P17040 1043 aaPredicted RBP16.56■□□□□ 0.24
PRPF3-201ENST00000324862 TFAMQ00059 246 aaKnown RBP16.56■□□□□ 0.24
PRPF3-201ENST00000324862 TDRD10Q5VZ19 366 aaKnown RBP16.56■□□□□ 0.24
PRPF3-201ENST00000324862 JADE1Q6IE81 842 aa16.56■□□□□ 0.24
PRPF3-201ENST00000324862 GJB7Q6PEY0 223 aa16.56■□□□□ 0.24
PRPF3-201ENST00000324862 TMC2Q8TDI7 906 aa16.56■□□□□ 0.24
PRPF3-201ENST00000324862 VWCEQ96DN2 955 aa16.56■□□□□ 0.24
PRPF3-201ENST00000324862 ZFP42Q96MM3 310 aa16.56■□□□□ 0.24
PRPF3-201ENST00000324862 PPP1R9BQ96SB3 815 aa16.56■□□□□ 0.24
PRPF3-201ENST00000324862 GCNT4Q9P109 453 aa16.56■□□□□ 0.24
PRPF3-201ENST00000324862 PARP2Q9UGN5 583 aa16.56■□□□□ 0.24
PRPF3-201ENST00000324862 CDC25BP30305 580 aa16.55■□□□□ 0.24
PRPF3-201ENST00000324862 MXI1P50539 228 aa16.55■□□□□ 0.24
PRPF3-201ENST00000324862 MYL7Q01449 175 aa16.55■□□□□ 0.24
PRPF3-201ENST00000324862 CCDC173Q0VFZ6 552 aa16.55■□□□□ 0.24
PRPF3-201ENST00000324862 LRMPQ12912 555 aa16.55■□□□□ 0.24
PRPF3-201ENST00000324862 DSC3Q14574 896 aa16.55■□□□□ 0.24
PRPF3-201ENST00000324862 CCDC186Q7Z3E2 898 aa16.55■□□□□ 0.24
PRPF3-201ENST00000324862 ERGIC2Q96RQ1 377 aa16.55■□□□□ 0.24
PRPF3-201ENST00000324862 PI4K2AQ9BTU6 479 aa16.55■□□□□ 0.24
PRPF3-201ENST00000324862 AJAP1Q9UKB5 411 aaPredicted RBP16.55■□□□□ 0.24
PRPF3-201ENST00000324862 TTC26A0AVF1 554 aa16.55■□□□□ 0.24
PRPF3-201ENST00000324862 GYPCP04921 128 aa16.55■□□□□ 0.24
PRPF3-201ENST00000324862 FXR1P51114 621 aaKnown RBP eCLIP16.55■□□□□ 0.24
PRPF3-201ENST00000324862 ADKP55263 362 aaKnown RBP16.55■□□□□ 0.24
PRPF3-201ENST00000324862 DPY19L2P1Q6NXN4 242 aa16.55■□□□□ 0.24
PRPF3-201ENST00000324862 ZNF830Q96NB3 372 aaPredicted RBP16.55■□□□□ 0.24
PRPF3-201ENST00000324862 LSM14BQ9BX40 385 aaKnown RBP16.55■□□□□ 0.24
PRPF3-201ENST00000324862 PLAGL2Q9UPG8 496 aa16.55■□□□□ 0.24
PRPF3-201ENST00000324862 SCN5AQ14524 2016 aa16.54■□□□□ 0.24
PRPF3-201ENST00000324862 NOL4O94818 638 aa16.54■□□□□ 0.24
PRPF3-201ENST00000324862 ATF7P17544 494 aaPredicted RBP16.54■□□□□ 0.24
PRPF3-201ENST00000324862 PON1P27169 355 aa16.54■□□□□ 0.24
PRPF3-201ENST00000324862 CLDN10P78369 228 aa16.54■□□□□ 0.24
PRPF3-201ENST00000324862 EXOC3L4Q17RC7 722 aa16.54■□□□□ 0.24
PRPF3-201ENST00000324862 ARHGAP30Q7Z6I6 1101 aaPredicted RBP16.54■□□□□ 0.24
PRPF3-201ENST00000324862 CGRRF1Q99675 332 aa16.54■□□□□ 0.24
PRPF3-201ENST00000324862 CCDC94Q9BW85 323 aaPredicted RBP16.54■□□□□ 0.24
PRPF3-201ENST00000324862 CST3P01034 146 aaPredicted RBP16.54■□□□□ 0.24
PRPF3-201ENST00000324862 C4BPAP04003 597 aaKnown RBP16.54■□□□□ 0.24
PRPF3-201ENST00000324862 CASP14P31944 242 aa16.54■□□□□ 0.24
PRPF3-201ENST00000324862 BIRC3Q13489 604 aa16.54■□□□□ 0.24
PRPF3-201ENST00000324862 USP38Q8NB14 1042 aa16.54■□□□□ 0.24
PRPF3-201ENST00000324862 LMO3Q8TAP4 145 aa16.54■□□□□ 0.24
PRPF3-201ENST00000324862 CHST12Q9NRB3 414 aa16.54■□□□□ 0.24
PRPF3-201ENST00000324862 CACNG4Q9UBN1 327 aa16.54■□□□□ 0.24
PRPF3-201ENST00000324862 A0A1W2PQC6 194 aa16.53■□□□□ 0.24
PRPF3-201ENST00000324862 VNN1O95497 513 aa16.53■□□□□ 0.24
PRPF3-201ENST00000324862 MCCD1P59942 119 aaPredicted RBP16.53■□□□□ 0.24
PRPF3-201ENST00000324862 TBX2Q13207 712 aaPredicted RBP16.53■□□□□ 0.24
PRPF3-201ENST00000324862 PLEKHG4Q58EX7 1191 aa16.53■□□□□ 0.24
PRPF3-201ENST00000324862 KRT39Q6A163 491 aa16.53■□□□□ 0.24
PRPF3-201ENST00000324862 TRIM65Q6PJ69 517 aa16.53■□□□□ 0.24
PRPF3-201ENST00000324862 C15orf39Q6ZRI6 1047 aa16.53■□□□□ 0.24
PRPF3-201ENST00000324862 C18orf25Q96B23 403 aaPredicted RBP16.53■□□□□ 0.24
PRPF3-201ENST00000324862 SNX27Q96L92 541 aa16.53■□□□□ 0.24
PRPF3-201ENST00000324862 TMEM8AQ9HCN3 771 aa16.53■□□□□ 0.24
PRPF3-201ENST00000324862 SIX2Q9NPC8 291 aa16.53■□□□□ 0.24
PRPF3-201ENST00000324862 SQORQ9Y6N5 450 aa16.53■□□□□ 0.24
PRPF3-201ENST00000324862 TRIM21P19474 475 aaKnown RBP16.53■□□□□ 0.24
PRPF3-201ENST00000324862 MLH1P40692 756 aa16.53■□□□□ 0.24
PRPF3-201ENST00000324862 PPP2R3AQ06190 1150 aa16.53■□□□□ 0.24
PRPF3-201ENST00000324862 ZACNQ401N2 412 aa16.53■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms