RNA–Protein interactions for RNA: ENST00000323853.9

SNRNP200-201, Transcript of small nuclear ribonucleoprotein U5 subunit 200, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRNP200, Length 7,165 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP200-201ENST00000323853 EDRF1Q3B7T1 1238 aa11.54□□□□□ -0.56
SNRNP200-201ENST00000323853 CDC42EP5Q6NZY7 148 aa11.54□□□□□ -0.56
SNRNP200-201ENST00000323853 SLC30A5Q8TAD4 765 aa11.54□□□□□ -0.56
SNRNP200-201ENST00000323853 ZNF668Q96K58 619 aaPredicted RBP11.54□□□□□ -0.56
SNRNP200-201ENST00000323853 XAB2Q9HCS7 855 aaKnown RBP11.54□□□□□ -0.56
SNRNP200-201ENST00000323853 SLC8A2Q9UPR5 921 aa11.54□□□□□ -0.56
SNRNP200-201ENST00000323853 TCP11X1B4DZS4 312 aa11.54□□□□□ -0.56
SNRNP200-201ENST00000323853 EIF3HO15372 352 aaKnown RBP eCLIP11.54□□□□□ -0.562e-6■■□□□ 13.6
SNRNP200-201ENST00000323853 ITIH2P19823 946 aa11.54□□□□□ -0.56
SNRNP200-201ENST00000323853 CYP2C19P33261 490 aa11.54□□□□□ -0.56
SNRNP200-201ENST00000323853 COPB2P35606 906 aa11.54□□□□□ -0.56
SNRNP200-201ENST00000323853 SULT1E1P49888 294 aa11.54□□□□□ -0.56
SNRNP200-201ENST00000323853 MTMR2Q13614 643 aa11.54□□□□□ -0.56
SNRNP200-201ENST00000323853 TEDDM1Q5T9Z0 273 aa11.54□□□□□ -0.56
SNRNP200-201ENST00000323853 ICE2Q659A1 982 aa11.54□□□□□ -0.56
SNRNP200-201ENST00000323853 ALKBH8Q96BT7 664 aaKnown RBP11.54□□□□□ -0.56
SNRNP200-201ENST00000323853 MAGEB5Q9BZ81 275 aa11.54□□□□□ -0.56
SNRNP200-201ENST00000323853 TRABDQ9H4I3 376 aa11.54□□□□□ -0.56
SNRNP200-201ENST00000323853 KLC4Q9NSK0 619 aa11.54□□□□□ -0.56
SNRNP200-201ENST00000323853 DIAPH2O60879 1101 aa11.54□□□□□ -0.56
SNRNP200-201ENST00000323853 BYSLQ13895 437 aaKnown RBP11.54□□□□□ -0.56
SNRNP200-201ENST00000323853 ENGASEQ8NFI3 743 aa11.54□□□□□ -0.56
SNRNP200-201ENST00000323853 URGCPQ8TCY9 931 aa11.54□□□□□ -0.56
SNRNP200-201ENST00000323853 SYN2Q92777 582 aaPredicted RBP11.54□□□□□ -0.56
SNRNP200-201ENST00000323853 ETNK1Q9HBU6 452 aa11.54□□□□□ -0.56
SNRNP200-201ENST00000323853 EEF1DP29692 281 aaKnown RBP11.54□□□□□ -0.56
SNRNP200-201ENST00000323853 NCLNQ969V3 563 aa11.54□□□□□ -0.56
SNRNP200-201ENST00000323853 CCDC22O60826 627 aa11.54□□□□□ -0.56
SNRNP200-201ENST00000323853 EFTUD2Q15029 972 aaKnown RBP eCLIP11.54□□□□□ -0.565e-7■■■■■ 35.8
SNRNP200-201ENST00000323853 RBBP7Q16576 425 aa11.54□□□□□ -0.56
SNRNP200-201ENST00000323853 KCNV1Q6PIU1 500 aa11.54□□□□□ -0.56
SNRNP200-201ENST00000323853 KCNB2Q92953 911 aa11.54□□□□□ -0.56
SNRNP200-201ENST00000323853 CD163L1Q9NR16 1453 aa11.54□□□□□ -0.56
SNRNP200-201ENST00000323853 PREX1Q8TCU6 1659 aa11.54□□□□□ -0.56
SNRNP200-201ENST00000323853 RAD51CO43502 376 aa11.53□□□□□ -0.56
SNRNP200-201ENST00000323853 ACTN3Q08043 901 aaPredicted RBP11.53□□□□□ -0.56
SNRNP200-201ENST00000323853 NFX1Q12986 1120 aaKnown RBP11.53□□□□□ -0.56
SNRNP200-201ENST00000323853 LONRF1Q17RB8 773 aa11.53□□□□□ -0.56
SNRNP200-201ENST00000323853 OLA1Q9NTK5 396 aaKnown RBP11.53□□□□□ -0.56
SNRNP200-201ENST00000323853 PPP1R12AO14974 1030 aaPredicted RBP11.53□□□□□ -0.56
SNRNP200-201ENST00000323853 SNRNP35Q16560 246 aaKnown RBP11.53□□□□□ -0.56
SNRNP200-201ENST00000323853 NYAP1Q6ZVC0 841 aa11.53□□□□□ -0.56
SNRNP200-201ENST00000323853 SMARCAL1Q9NZC9 954 aa11.53□□□□□ -0.56
SNRNP200-201ENST00000323853 ELF1P32519 619 aa11.53□□□□□ -0.56
SNRNP200-201ENST00000323853 TMED1Q13445 227 aa11.53□□□□□ -0.56
SNRNP200-201ENST00000323853 TKFCQ3LXA3 575 aa11.53□□□□□ -0.56
SNRNP200-201ENST00000323853 STRIP1Q5VSL9 837 aa11.53□□□□□ -0.56
SNRNP200-201ENST00000323853 JMJD4Q9H9V9 463 aa11.53□□□□□ -0.56
SNRNP200-201ENST00000323853 SENP1Q9P0U3 644 aa11.53□□□□□ -0.56
SNRNP200-201ENST00000323853 KCNN4O15554 427 aa11.53□□□□□ -0.56
SNRNP200-201ENST00000323853 PPP1R37O75864 691 aa11.53□□□□□ -0.56
SNRNP200-201ENST00000323853 PDHA1P08559 390 aa11.53□□□□□ -0.56
SNRNP200-201ENST00000323853 SNRPFP62306 86 aaKnown RBP11.53□□□□□ -0.56
SNRNP200-201ENST00000323853 FBXO33Q7Z6M2 555 aa11.53□□□□□ -0.56
SNRNP200-201ENST00000323853 SCN4BQ8IWT1 228 aa11.53□□□□□ -0.56
SNRNP200-201ENST00000323853 MMGT1Q8N4V1 131 aa11.53□□□□□ -0.56
SNRNP200-201ENST00000323853 ZNF560Q96MR9 790 aa11.53□□□□□ -0.56
SNRNP200-201ENST00000323853 ACAP3Q96P50 834 aa11.53□□□□□ -0.56
SNRNP200-201ENST00000323853 SP110Q9HB58 689 aa11.53□□□□□ -0.56
SNRNP200-201ENST00000323853 ARL2BPQ9Y2Y0 163 aa11.53□□□□□ -0.56
SNRNP200-201ENST00000323853 TMEM253P0C7T8 217 aa11.53□□□□□ -0.56
SNRNP200-201ENST00000323853 ABTB1Q969K4 478 aaPredicted RBP11.53□□□□□ -0.56
SNRNP200-201ENST00000323853 SUCLA2Q9P2R7 463 aaPredicted RBP11.53□□□□□ -0.56
SNRNP200-201ENST00000323853 SMG5Q9UPR3 1016 aaKnown RBP11.53□□□□□ -0.56
SNRNP200-201ENST00000323853 DFFAO00273 331 aa11.53□□□□□ -0.56
SNRNP200-201ENST00000323853 HHIPL2Q6UWX4 724 aa11.53□□□□□ -0.56
SNRNP200-201ENST00000323853 USP49Q70CQ1 688 aa11.53□□□□□ -0.56
SNRNP200-201ENST00000323853 CCNYL1Q8N7R7 359 aa11.53□□□□□ -0.56
SNRNP200-201ENST00000323853 MARCH10Q8NA82 808 aaPredicted RBP11.53□□□□□ -0.56
SNRNP200-201ENST00000323853 ARL8AQ96BM9 186 aa11.53□□□□□ -0.56
SNRNP200-201ENST00000323853 TMEM117Q9H0C3 514 aa11.53□□□□□ -0.56
SNRNP200-201ENST00000323853 EML4Q9HC35 981 aaKnown RBP11.53□□□□□ -0.56
SNRNP200-201ENST00000323853 NDE1Q9NXR1 346 aa11.53□□□□□ -0.56
SNRNP200-201ENST00000323853 CFAP69A5D8W1 941 aa11.52□□□□□ -0.56
SNRNP200-201ENST00000323853 LCA5Q86VQ0 697 aa11.52□□□□□ -0.56
SNRNP200-201ENST00000323853 KIFC3Q9BVG8 833 aa11.52□□□□□ -0.56
SNRNP200-201ENST00000323853 ASB14A6NK59 587 aa11.52□□□□□ -0.56
SNRNP200-201ENST00000323853 NDUFB10O96000 172 aa11.52□□□□□ -0.56
SNRNP200-201ENST00000323853 HADHAP40939 763 aa11.52□□□□□ -0.56
SNRNP200-201ENST00000323853 RAD23BP54727 409 aa11.52□□□□□ -0.56
SNRNP200-201ENST00000323853 SH2D3CQ8N5H7 860 aa11.52□□□□□ -0.56
SNRNP200-201ENST00000323853 MROH2AA6NES4 1674 aa11.52□□□□□ -0.56
SNRNP200-201ENST00000323853 DGAT1O75907 488 aa11.52□□□□□ -0.57
SNRNP200-201ENST00000323853 POU5F1BQ06416 359 aa11.52□□□□□ -0.57
SNRNP200-201ENST00000323853 ZC2HC1CQ53FD0 456 aaPredicted RBP11.52□□□□□ -0.57
SNRNP200-201ENST00000323853 KLHDC7AQ5VTJ3 777 aa11.52□□□□□ -0.57
SNRNP200-201ENST00000323853 MCEEQ96PE7 176 aa11.52□□□□□ -0.57
SNRNP200-201ENST00000323853 MEFVO15553 781 aaPredicted RBP11.52□□□□□ -0.57
SNRNP200-201ENST00000323853 GRIN1Q05586 938 aa11.52□□□□□ -0.57
SNRNP200-201ENST00000323853 USP38Q8NB14 1042 aa11.52□□□□□ -0.57
SNRNP200-201ENST00000323853 RNF149Q8NC42 400 aa11.52□□□□□ -0.57
SNRNP200-201ENST00000323853 PIK3R2O00459 728 aa11.52□□□□□ -0.57
SNRNP200-201ENST00000323853 STAT5BP51692 787 aa11.52□□□□□ -0.57
SNRNP200-201ENST00000323853 ZBTB41Q5SVQ8 909 aa11.52□□□□□ -0.57
SNRNP200-201ENST00000323853 EP400NLQ6ZTU2 488 aa11.52□□□□□ -0.57
SNRNP200-201ENST00000323853 SMIM5Q71RC9 77 aa11.52□□□□□ -0.57
SNRNP200-201ENST00000323853 C2orf69Q8N8R5 385 aa11.52□□□□□ -0.57
SNRNP200-201ENST00000323853 PPHLN1Q8NEY8 458 aaKnown RBP11.52□□□□□ -0.57
SNRNP200-201ENST00000323853 AFG1LQ8WV93 481 aa11.52□□□□□ -0.57
SNRNP200-201ENST00000323853 XPO7Q9UIA9 1087 aaKnown RBP11.52□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms