RNA–Protein interactions for RNA: ENST00000320876.10

SMCHD1-201, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMCHD1, Length 8,821 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-201ENST00000320876 DFFAO00273 331 aa17.75■□□□□ 0.43
SMCHD1-201ENST00000320876 SH3KBP1Q96B97 665 aa17.75■□□□□ 0.43
SMCHD1-201ENST00000320876 RMDN1Q96DB5 314 aa17.75■□□□□ 0.43
SMCHD1-201ENST00000320876 FAM129AQ9BZQ8 928 aa17.75■□□□□ 0.43
SMCHD1-201ENST00000320876 FAM107AO95990 144 aa17.75■□□□□ 0.43
SMCHD1-201ENST00000320876 CRYMQ14894 314 aa17.75■□□□□ 0.43
SMCHD1-201ENST00000320876 UGP2Q16851 508 aa17.75■□□□□ 0.43
SMCHD1-201ENST00000320876 TMED8Q6PL24 325 aaPredicted RBP17.75■□□□□ 0.43
SMCHD1-201ENST00000320876 RHBDL2Q9NX52 303 aa17.75■□□□□ 0.43
SMCHD1-201ENST00000320876 HSPBP1Q9NZL4 362 aa17.75■□□□□ 0.43
SMCHD1-201ENST00000320876 HMOX2P30519 316 aa17.75■□□□□ 0.43
SMCHD1-201ENST00000320876 MAPK6Q16659 721 aa17.75■□□□□ 0.43
SMCHD1-201ENST00000320876 IYDQ6PHW0 289 aa17.75■□□□□ 0.43
SMCHD1-201ENST00000320876 FLCNQ8NFG4 579 aa17.75■□□□□ 0.43
SMCHD1-201ENST00000320876 C11orf70Q9BRQ4 267 aa17.75■□□□□ 0.43
SMCHD1-201ENST00000320876 PUS7LQ9H0K6 701 aaKnown RBP17.75■□□□□ 0.43
SMCHD1-201ENST00000320876 EPS8L2Q9H6S3 715 aa17.75■□□□□ 0.43
SMCHD1-201ENST00000320876 ZNF839A8K0R7 811 aa17.75■□□□□ 0.43
SMCHD1-201ENST00000320876 PLOD1Q02809 727 aaPredicted RBP17.75■□□□□ 0.43
SMCHD1-201ENST00000320876 DOK7Q18PE1 504 aa17.75■□□□□ 0.43
SMCHD1-201ENST00000320876 TTC33Q6PID6 262 aaPredicted RBP17.75■□□□□ 0.43
SMCHD1-201ENST00000320876 FRMD5Q7Z6J6 570 aa17.75■□□□□ 0.43
SMCHD1-201ENST00000320876 AMACRQ9UHK6 382 aa17.75■□□□□ 0.43
SMCHD1-201ENST00000320876 NEMP1O14524 444 aa17.75■□□□□ 0.43
SMCHD1-201ENST00000320876 KCNN4O15554 427 aa17.75■□□□□ 0.43
SMCHD1-201ENST00000320876 PHKG2P15735 406 aa17.75■□□□□ 0.43
SMCHD1-201ENST00000320876 RCOR2Q8IZ40 523 aa17.75■□□□□ 0.43
SMCHD1-201ENST00000320876 FOXP3Q9BZS1 431 aa17.75■□□□□ 0.43
SMCHD1-201ENST00000320876 PSD3Q9NYI0 1048 aa17.75■□□□□ 0.43
SMCHD1-201ENST00000320876 ZHX2Q9Y6X8 837 aa17.75■□□□□ 0.43
SMCHD1-201ENST00000320876 UBA6A0AVT1 1052 aaPredicted RBP17.75■□□□□ 0.43
SMCHD1-201ENST00000320876 TNPO2O14787 897 aaKnown RBP17.75■□□□□ 0.43
SMCHD1-201ENST00000320876 ASAP3Q8TDY4 903 aa17.75■□□□□ 0.43
SMCHD1-201ENST00000320876 DDI1Q8WTU0 396 aa17.75■□□□□ 0.43
SMCHD1-201ENST00000320876 C1orf54Q8WWF1 131 aa17.75■□□□□ 0.43
SMCHD1-201ENST00000320876 C17orf80Q9BSJ5 609 aa17.75■□□□□ 0.43
SMCHD1-201ENST00000320876 NCKAP5LQ9HCH0 1330 aa17.75■□□□□ 0.43
SMCHD1-201ENST00000320876 LRRIQ3A6PVS8 624 aaPredicted RBP17.74■□□□□ 0.43
SMCHD1-201ENST00000320876 TRIP10Q15642 601 aa17.74■□□□□ 0.43
SMCHD1-201ENST00000320876 GALNT4Q8N4A0 578 aa17.74■□□□□ 0.43
SMCHD1-201ENST00000320876 WDR24Q96S15 920 aa17.74■□□□□ 0.43
SMCHD1-201ENST00000320876 SYNDIG1LA6NDD5 238 aa17.74■□□□□ 0.43
SMCHD1-201ENST00000320876 ENO3P13929 434 aaPredicted RBP17.74■□□□□ 0.43
SMCHD1-201ENST00000320876 CDH6P55285 790 aa17.74■□□□□ 0.43
SMCHD1-201ENST00000320876 FAM102AQ5T9C2 384 aaPredicted RBP17.74■□□□□ 0.43
SMCHD1-201ENST00000320876 TBC1D19Q8N5T2 526 aa17.74■□□□□ 0.43
SMCHD1-201ENST00000320876 SPAG6O75602 509 aa17.74■□□□□ 0.43
SMCHD1-201ENST00000320876 SRP72O76094 671 aaKnown RBP17.74■□□□□ 0.43
SMCHD1-201ENST00000320876 ZNF568Q3ZCX4 644 aa17.74■□□□□ 0.43
SMCHD1-201ENST00000320876 RC3H1Q5TC82 1133 aaKnown RBP17.74■□□□□ 0.43
SMCHD1-201ENST00000320876 TTC39BQ5VTQ0 682 aaPredicted RBP17.74■□□□□ 0.43
SMCHD1-201ENST00000320876 GPR141Q7Z602 305 aa17.74■□□□□ 0.43
SMCHD1-201ENST00000320876 BEST2Q8NFU1 509 aa17.74■□□□□ 0.43
SMCHD1-201ENST00000320876 AFG1LQ8WV93 481 aa17.74■□□□□ 0.43
SMCHD1-201ENST00000320876 ERP27Q96DN0 273 aa17.74■□□□□ 0.43
SMCHD1-201ENST00000320876 ZFP42Q96MM3 310 aa17.74■□□□□ 0.43
SMCHD1-201ENST00000320876 SH3GL1Q99961 368 aa17.74■□□□□ 0.43
SMCHD1-201ENST00000320876 ANKRD12Q6UB98 2062 aa17.74■□□□□ 0.43
SMCHD1-201ENST00000320876 CCT8L1PA6NM43 557 aa17.74■□□□□ 0.43
SMCHD1-201ENST00000320876 TAS2R42Q7RTR8 314 aa17.74■□□□□ 0.43
SMCHD1-201ENST00000320876 BBS2Q9BXC9 721 aa17.74■□□□□ 0.43
SMCHD1-201ENST00000320876 OSBPL8Q9BZF1 889 aa17.74■□□□□ 0.43
SMCHD1-201ENST00000320876 H2AFY2Q9P0M6 372 aaPredicted RBP17.74■□□□□ 0.43
SMCHD1-201ENST00000320876 DLGAP2Q9P1A6 1054 aa17.74■□□□□ 0.43
SMCHD1-201ENST00000320876 NNMTP40261 264 aa17.74■□□□□ 0.43
SMCHD1-201ENST00000320876 FMR1NBQ8N0W7 255 aaPredicted RBP17.74■□□□□ 0.43
SMCHD1-201ENST00000320876 HIC2Q96JB3 615 aa17.74■□□□□ 0.43
SMCHD1-201ENST00000320876 GUCA1CO95843 209 aa17.74■□□□□ 0.43
SMCHD1-201ENST00000320876 SERPINB9P50453 376 aa17.74■□□□□ 0.43
SMCHD1-201ENST00000320876 STX3Q13277 289 aa17.74■□□□□ 0.43
SMCHD1-201ENST00000320876 PKN3Q6P5Z2 889 aa17.74■□□□□ 0.43
SMCHD1-201ENST00000320876 TTC30BQ8N4P2 665 aa17.74■□□□□ 0.43
SMCHD1-201ENST00000320876 FARP1Q9Y4F1 1045 aaPredicted RBP17.74■□□□□ 0.43
SMCHD1-201ENST00000320876 ZNF197O14709 1029 aa17.73■□□□□ 0.43
SMCHD1-201ENST00000320876 COPB2P35606 906 aa17.73■□□□□ 0.43
SMCHD1-201ENST00000320876 PFKFB3Q16875 520 aaPredicted RBP17.73■□□□□ 0.43
SMCHD1-201ENST00000320876 CNGB3Q9NQW8 809 aa17.73■□□□□ 0.43
SMCHD1-201ENST00000320876 PVALEFA0A1B0GWK0 134 aa17.73■□□□□ 0.43
SMCHD1-201ENST00000320876 TTC26A0AVF1 554 aa17.73■□□□□ 0.43
SMCHD1-201ENST00000320876 F5H423 210 aaPredicted RBP17.73■□□□□ 0.43
SMCHD1-201ENST00000320876 GNAT1P11488 350 aa17.73■□□□□ 0.43
SMCHD1-201ENST00000320876 PLA2G4AP47712 749 aa17.73■□□□□ 0.43
SMCHD1-201ENST00000320876 EIF3EP60228 445 aaKnown RBP17.73■□□□□ 0.43
SMCHD1-201ENST00000320876 ARHGEF6Q15052 776 aa17.73■□□□□ 0.43
SMCHD1-201ENST00000320876 C6orf10Q5SRN2 563 aa17.73■□□□□ 0.43
SMCHD1-201ENST00000320876 C3orf20Q8ND61 904 aa17.73■□□□□ 0.43
SMCHD1-201ENST00000320876 CNKSR1Q969H4 720 aa17.73■□□□□ 0.43
SMCHD1-201ENST00000320876 ASIC4Q96FT7 647 aa17.73■□□□□ 0.43
SMCHD1-201ENST00000320876 CNDP1Q96KN2 507 aa17.73■□□□□ 0.43
SMCHD1-201ENST00000320876 USP27XA6NNY8 438 aa17.73■□□□□ 0.43
SMCHD1-201ENST00000320876 ZBTB5O15062 677 aa17.73■□□□□ 0.43
SMCHD1-201ENST00000320876 PSMA3P25788 255 aa17.73■□□□□ 0.43
SMCHD1-201ENST00000320876 NME3Q13232 169 aa17.73■□□□□ 0.43
SMCHD1-201ENST00000320876 CC2D2BQ6DHV5 1058 aa17.73■□□□□ 0.43
SMCHD1-201ENST00000320876 ADGRA3Q8IWK6 1321 aa17.73■□□□□ 0.43
SMCHD1-201ENST00000320876 RFX7Q2KHR2 1363 aa17.73■□□□□ 0.43
SMCHD1-201ENST00000320876 ST13P5Q8NFI4 369 aaPredicted RBP17.73■□□□□ 0.43
SMCHD1-201ENST00000320876 RBM15Q96T37 977 aaKnown RBP eCLIP17.73■□□□□ 0.43
SMCHD1-201ENST00000320876 ARHGEF40Q8TER5 1519 aa17.73■□□□□ 0.43
SMCHD1-201ENST00000320876 UBN2Q6ZU65 1347 aa17.73■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms