RNA–Protein interactions for RNA: ENST00000319792.7

NECTIN3-201, Transcript of nectin cell adhesion molecule 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NECTIN3, Length 1,549 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECTIN3-201ENST00000319792 RAD9BQ6WBX8 426 aa33.89■■■■□ 3.02
NECTIN3-201ENST00000319792 WDR49Q8IV35 697 aa33.89■■■■□ 3.02
NECTIN3-201ENST00000319792 C17orf53Q8N3J3 647 aaPredicted RBP33.89■■■■□ 3.02
NECTIN3-201ENST00000319792 SPTLC3Q9NUV7 552 aa33.89■■■■□ 3.02
NECTIN3-201ENST00000319792 CDY2AQ9Y6F7 541 aa33.89■■■■□ 3.02
NECTIN3-201ENST00000319792 PTK7Q13308 1070 aa33.89■■■■□ 3.02
NECTIN3-201ENST00000319792 NOTUMQ6P988 496 aa33.89■■■■□ 3.02
NECTIN3-201ENST00000319792 SEMA4DQ92854 862 aa33.89■■■■□ 3.02
NECTIN3-201ENST00000319792 AJAP1Q9UKB5 411 aaPredicted RBP33.89■■■■□ 3.02
NECTIN3-201ENST00000319792 IL18RAPO95256 599 aa33.88■■■■□ 3.01
NECTIN3-201ENST00000319792 STAG3L1P0CL83 205 aa33.88■■■■□ 3.01
NECTIN3-201ENST00000319792 MGAT3Q09327 533 aa33.88■■■■□ 3.01
NECTIN3-201ENST00000319792 SFMBT2Q5VUG0 894 aa33.88■■■■□ 3.01
NECTIN3-201ENST00000319792 SLC27A1Q6PCB7 646 aa33.88■■■■□ 3.01
NECTIN3-201ENST00000319792 TAS1R2Q8TE23 839 aa33.88■■■■□ 3.01
NECTIN3-201ENST00000319792 CHP1Q99653 195 aa33.88■■■■□ 3.01
NECTIN3-201ENST00000319792 SENP6Q9GZR1 1112 aaPredicted RBP33.88■■■■□ 3.01
NECTIN3-201ENST00000319792 RPF1Q9H9Y2 349 aaKnown RBP33.88■■■■□ 3.01
NECTIN3-201ENST00000319792 AIPL1Q9NZN9 384 aa33.88■■■■□ 3.01
NECTIN3-201ENST00000319792 KBTBD13C9JR72 458 aa33.87■■■■□ 3.01
NECTIN3-201ENST00000319792 B4GALT4O60513 344 aa33.87■■■■□ 3.01
NECTIN3-201ENST00000319792 PHLDB3Q6NSJ2 640 aa33.87■■■■□ 3.01
NECTIN3-201ENST00000319792 RAB20Q9NX57 234 aa33.87■■■■□ 3.01
NECTIN3-201ENST00000319792 MTF1Q14872 753 aa33.86■■■■□ 3.01
NECTIN3-201ENST00000319792 TDRD10Q5VZ19 366 aaKnown RBP33.86■■■■□ 3.01
NECTIN3-201ENST00000319792 LMBRD2Q68DH5 695 aaPredicted RBP33.86■■■■□ 3.01
NECTIN3-201ENST00000319792 GJB7Q6PEY0 223 aa33.86■■■■□ 3.01
NECTIN3-201ENST00000319792 TMEM192Q8IY95 271 aa33.86■■■■□ 3.01
NECTIN3-201ENST00000319792 CCAR2Q8N163 923 aaKnown RBP33.86■■■■□ 3.01
NECTIN3-201ENST00000319792 SPAG5Q96R06 1193 aa33.86■■■■□ 3.01
NECTIN3-201ENST00000319792 STK33Q9BYT3 514 aa33.86■■■■□ 3.01
NECTIN3-201ENST00000319792 DNAJC12Q9UKB3 198 aa33.86■■■■□ 3.01
NECTIN3-201ENST00000319792 A0A0U1RQG5 324 aaPredicted RBP33.85■■■■□ 3.01
NECTIN3-201ENST00000319792 DNM1LO00429 736 aa33.85■■■■□ 3.01
NECTIN3-201ENST00000319792 ZC3H11AO75152 810 aaKnown RBP eCLIP33.85■■■■□ 3.01
NECTIN3-201ENST00000319792 GRM5P41594 1212 aa33.85■■■■□ 3.01
NECTIN3-201ENST00000319792 SEZ6LQ9BYH1 1024 aa33.85■■■■□ 3.01
NECTIN3-201ENST00000319792 STARD7Q9NQZ5 370 aa33.85■■■■□ 3.01
NECTIN3-201ENST00000319792 CENPFP49454 3210 aa33.85■■■■□ 3.01
NECTIN3-201ENST00000319792 LRRN2O75325 713 aa33.84■■■■□ 3.01
NECTIN3-201ENST00000319792 CHRNA1P02708 482 aa33.84■■■■□ 3.01
NECTIN3-201ENST00000319792 CXCL8P10145 99 aa33.84■■■■□ 3.01
NECTIN3-201ENST00000319792 CCL5P13501 91 aa33.84■■■■□ 3.01
NECTIN3-201ENST00000319792 OSTNP61366 133 aa33.84■■■■□ 3.01
NECTIN3-201ENST00000319792 RAPGEF1Q13905 1077 aa33.84■■■■□ 3.01
NECTIN3-201ENST00000319792 MTFR1Q15390 333 aa33.84■■■■□ 3.01
NECTIN3-201ENST00000319792 TRIM71Q2Q1W2 868 aaKnown RBP33.84■■■■□ 3.01
NECTIN3-201ENST00000319792 FAM228AQ86W67 206 aa33.84■■■■□ 3.01
NECTIN3-201ENST00000319792 OR5B17Q8NGF7 314 aa33.84■■■■□ 3.01
NECTIN3-201ENST00000319792 DHX38Q92620 1227 aaKnown RBP33.84■■■■□ 3.01
NECTIN3-201ENST00000319792 FAM84AQ96KN4 292 aa33.84■■■■□ 3.01
NECTIN3-201ENST00000319792 TRMT13Q9NUP7 481 aaKnown RBP33.84■■■■□ 3.01
NECTIN3-201ENST00000319792 TOGARAM2Q6ZUX3 1019 aa33.84■■■■□ 3.01
NECTIN3-201ENST00000319792 RRAGDQ9NQL2 400 aaPredicted RBP33.84■■■■□ 3.01
NECTIN3-201ENST00000319792 NOC2LQ9Y3T9 749 aaKnown RBP33.84■■■■□ 3.01
NECTIN3-201ENST00000319792 MROH7Q68CQ1 1323 aa33.83■■■■□ 3.01
NECTIN3-201ENST00000319792 TULP1O00294 542 aaPredicted RBP33.83■■■■□ 3.01
NECTIN3-201ENST00000319792 MEFVO15553 781 aaPredicted RBP33.83■■■■□ 3.01
NECTIN3-201ENST00000319792 CAND2O75155 1236 aa33.83■■■■□ 3.01
NECTIN3-201ENST00000319792 NPTXRO95502 500 aa33.83■■■■□ 3.01
NECTIN3-201ENST00000319792 HGSNATQ68CP4 663 aa33.83■■■■□ 3.01
NECTIN3-201ENST00000319792 ARHGEF19Q8IW93 802 aa33.83■■■■□ 3.01
NECTIN3-201ENST00000319792 CCDC170Q8IYT3 715 aa33.83■■■■□ 3.01
NECTIN3-201ENST00000319792 ASB7Q9H672 318 aa33.83■■■■□ 3.01
NECTIN3-201ENST00000319792 ARHGAP20Q9P2F6 1191 aa33.83■■■■□ 3.01
NECTIN3-201ENST00000319792 OGDHLQ9ULD0 1010 aa33.83■■■■□ 3.01
NECTIN3-201ENST00000319792 VNN1O95497 513 aa33.82■■■■□ 3
NECTIN3-201ENST00000319792 HLA-DRAP01903 254 aa33.82■■■■□ 3
NECTIN3-201ENST00000319792 THPOP40225 353 aa33.82■■■■□ 3
NECTIN3-201ENST00000319792 FAM26DQ5JW98 314 aa33.82■■■■□ 3
NECTIN3-201ENST00000319792 NT5C1BQ96P26 610 aa33.82■■■■□ 3
NECTIN3-201ENST00000319792 NHEJ1Q9H9Q4 299 aaPredicted RBP33.82■■■■□ 3
NECTIN3-201ENST00000319792 PIN4Q9Y237 131 aaKnown RBP33.82■■■■□ 3
NECTIN3-201ENST00000319792 NOD1Q9Y239 953 aa33.82■■■■□ 3
NECTIN3-201ENST00000319792 TRIP11Q15643 1979 aa33.81■■■■□ 3
NECTIN3-201ENST00000319792 F8VZ95 297 aa33.81■■■■□ 3
NECTIN3-201ENST00000319792 CCP110O43303 1012 aa33.81■■■■□ 3
NECTIN3-201ENST00000319792 SERPING1P05155 500 aa33.81■■■■□ 3
NECTIN3-201ENST00000319792 BIRC3Q13489 604 aa33.81■■■■□ 3
NECTIN3-201ENST00000319792 ASIC2Q16515 512 aa33.81■■■■□ 3
NECTIN3-201ENST00000319792 DUOXA2Q1HG44 320 aa33.81■■■■□ 3
NECTIN3-201ENST00000319792 CTU1Q7Z7A3 348 aaKnown RBP33.81■■■■□ 3
NECTIN3-201ENST00000319792 EFCAB13Q8IY85 973 aa33.81■■■■□ 3
NECTIN3-201ENST00000319792 FAM212AQ96EL1 285 aa33.81■■■■□ 3
NECTIN3-201ENST00000319792 ACAP3Q96P50 834 aa33.81■■■■□ 3
NECTIN3-201ENST00000319792 DEFB118Q96PH6 123 aa33.81■■■■□ 3
NECTIN3-201ENST00000319792 CCDC94Q9BW85 323 aaPredicted RBP33.81■■■■□ 3
NECTIN3-201ENST00000319792 EIF2AQ9BY44 585 aaKnown RBP33.81■■■■□ 3
NECTIN3-201ENST00000319792 GPR88Q9GZN0 384 aa33.81■■■■□ 3
NECTIN3-201ENST00000319792 PDCD11Q14690 1871 aaKnown RBP33.81■■■■□ 3
NECTIN3-201ENST00000319792 ARVCFO00192 962 aa33.8■■■■□ 3
NECTIN3-201ENST00000319792 CTSHP09668 335 aa33.8■■■■□ 3
NECTIN3-201ENST00000319792 HSPA8P11142 646 aaKnown RBP33.8■■■■□ 3
NECTIN3-201ENST00000319792 STAT1P42224 750 aa33.8■■■■□ 3
NECTIN3-201ENST00000319792 MAPK8IP2Q13387 824 aaPredicted RBP33.8■■■■□ 3
NECTIN3-201ENST00000319792 DRAP1Q14919 205 aaPredicted RBP33.8■■■■□ 3
NECTIN3-201ENST00000319792 SLC10A6Q3KNW5 377 aa33.8■■■■□ 3
NECTIN3-201ENST00000319792 FMNL3Q8IVF7 1028 aa33.8■■■■□ 3
NECTIN3-201ENST00000319792 RNF208Q9H0X6 261 aa33.8■■■■□ 3
NECTIN3-201ENST00000319792 UBE2TQ9NPD8 197 aaPredicted RBP33.8■■■■□ 3
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms