RNA–Protein interactions for RNA: ENST00000318607.9

PABPC1-201, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PABPC1, Length 3,485 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-201ENST00000318607 LRRN4Q8WUT4 740 aa15.13■□□□□ 0.01
PABPC1-201ENST00000318607 BICD1Q96G01 975 aa15.13■□□□□ 0.01
PABPC1-201ENST00000318607 A0A1W2PPM1 405 aa15.13■□□□□ 0.01
PABPC1-201ENST00000318607 FAM187AA6NFU0 413 aa15.13■□□□□ 0.01
PABPC1-201ENST00000318607 PODXLO00592 558 aa15.13■□□□□ 0.01
PABPC1-201ENST00000318607 DHX34Q14147 1143 aaKnown RBP15.13■□□□□ 0.01
PABPC1-201ENST00000318607 PDCD7Q8N8D1 485 aaKnown RBP15.13■□□□□ 0.01
PABPC1-201ENST00000318607 GGA1Q9UJY5 639 aa15.13■□□□□ 0.01
PABPC1-201ENST00000318607 CASZ1Q86V15 1759 aa15.13■□□□□ 0.01
PABPC1-201ENST00000318607 RRM1P23921 792 aa15.13■□□□□ 0.01
PABPC1-201ENST00000318607 PTDSS1P48651 473 aaKnown RBP15.13■□□□□ 0.01
PABPC1-201ENST00000318607 POU5F1Q01860 360 aaKnown RBP15.13■□□□□ 0.01
PABPC1-201ENST00000318607 RBBP5Q15291 538 aaKnown RBP15.13■□□□□ 0.01
PABPC1-201ENST00000318607 STMN2Q93045 179 aa15.13■□□□□ 0.01
PABPC1-201ENST00000318607 L3MBTL3Q96JM7 780 aaPredicted RBP15.13■□□□□ 0.01
PABPC1-201ENST00000318607 HERPUD2Q9BSE4 406 aa15.13■□□□□ 0.01
PABPC1-201ENST00000318607 PAGR1Q9BTK6 254 aa15.13■□□□□ 0.01
PABPC1-201ENST00000318607 DBNDD1Q9H9R9 158 aa15.13■□□□□ 0.01
PABPC1-201ENST00000318607 FBXO6Q9NRD1 293 aaPredicted RBP15.13■□□□□ 0.01
PABPC1-201ENST00000318607 PAPOLBQ9NRJ5 636 aaKnown RBP15.13■□□□□ 0.01
PABPC1-201ENST00000318607 AGPAT3Q9NRZ7 376 aa15.13■□□□□ 0.01
PABPC1-201ENST00000318607 SLC5A4Q9NY91 659 aa15.13■□□□□ 0.01
PABPC1-201ENST00000318607 DAGLAQ9Y4D2 1042 aa15.13■□□□□ 0.01
PABPC1-201ENST00000318607 DUOX1Q9NRD9 1551 aa15.13■□□□□ 0.01
PABPC1-201ENST00000318607 RPA3P35244 121 aaPredicted RBP15.12■□□□□ 0.01
PABPC1-201ENST00000318607 PTGIRP43119 386 aa15.12■□□□□ 0.01
PABPC1-201ENST00000318607 MXI1P50539 228 aa15.12■□□□□ 0.01
PABPC1-201ENST00000318607 PEX3P56589 373 aa15.12■□□□□ 0.01
PABPC1-201ENST00000318607 FBXO11Q86XK2 927 aa15.12■□□□□ 0.01
PABPC1-201ENST00000318607 COL23A1Q86Y22 540 aaPredicted RBP15.12■□□□□ 0.01
PABPC1-201ENST00000318607 RASGEF1CQ8N431 466 aa15.12■□□□□ 0.01
PABPC1-201ENST00000318607 MAML1Q92585 1016 aa15.12■□□□□ 0.01
PABPC1-201ENST00000318607 ZFP69BQ9UJL9 534 aa15.12■□□□□ 0.01
PABPC1-201ENST00000318607 MYH3P11055 1940 aa15.12■□□□□ 0.01
PABPC1-201ENST00000318607 ATXN2Q99700 1313 aaKnown RBP15.12■□□□□ 0.01
PABPC1-201ENST00000318607 KRT36O76013 467 aa15.12■□□□□ 0.01
PABPC1-201ENST00000318607 GM2AP17900 193 aa15.12■□□□□ 0.01
PABPC1-201ENST00000318607 KDSRQ06136 332 aa15.12■□□□□ 0.01
PABPC1-201ENST00000318607 TSNAXIP1Q2TAA8 658 aa15.12■□□□□ 0.01
PABPC1-201ENST00000318607 CFAP157Q5JU67 520 aa15.12■□□□□ 0.01
PABPC1-201ENST00000318607 CCNJLQ8IV13 435 aa15.12■□□□□ 0.01
PABPC1-201ENST00000318607 GLIS1Q8NBF1 620 aa15.12■□□□□ 0.01
PABPC1-201ENST00000318607 FAM13CQ8NE31 585 aa15.12■□□□□ 0.01
PABPC1-201ENST00000318607 SYT15Q9BQS2 421 aa15.12■□□□□ 0.01
PABPC1-201ENST00000318607 TRIM4Q9C037 500 aa15.12■□□□□ 0.01
PABPC1-201ENST00000318607 TRABDQ9H4I3 376 aa15.12■□□□□ 0.01
PABPC1-201ENST00000318607 TNS2Q63HR2 1409 aa15.12■□□□□ 0.01
PABPC1-201ENST00000318607 HLA-DOAP06340 250 aa15.12■□□□□ 0.01
PABPC1-201ENST00000318607 ZNF268Q14587 947 aaPredicted RBP15.12■□□□□ 0.01
PABPC1-201ENST00000318607 FAM102BQ5T8I3 360 aa15.12■□□□□ 0.01
PABPC1-201ENST00000318607 CBWD2Q8IUF1 395 aa15.12■□□□□ 0.01
PABPC1-201ENST00000318607 SYT2Q8N9I0 419 aaPredicted RBP15.12■□□□□ 0.01
PABPC1-201ENST00000318607 CFAP61Q8NHU2 1237 aa15.12■□□□□ 0.01
PABPC1-201ENST00000318607 DNAJC9Q8WXX5 260 aa15.12■□□□□ 0.01
PABPC1-201ENST00000318607 RUNDC3BQ96NL0 473 aa15.12■□□□□ 0.01
PABPC1-201ENST00000318607 SMC6Q96SB8 1091 aa15.12■□□□□ 0.01
PABPC1-201ENST00000318607 EBF2Q9HAK2 575 aa15.12■□□□□ 0.01
PABPC1-201ENST00000318607 RXFP1Q9HBX9 757 aa15.12■□□□□ 0.01
PABPC1-201ENST00000318607 NINJ2Q9NZG7 142 aa15.12■□□□□ 0.01
PABPC1-201ENST00000318607 PARP2Q9UGN5 583 aa15.12■□□□□ 0.01
PABPC1-201ENST00000318607 C2CD2Q9Y426 696 aa15.12■□□□□ 0.01
PABPC1-201ENST00000318607 TJP1Q07157 1748 aa15.11■□□□□ 0.01
PABPC1-201ENST00000318607 SPEF2Q9C093 1822 aa15.11■□□□□ 0.01
PABPC1-201ENST00000318607 PAEPP09466 180 aa15.11■□□□□ 0.01
PABPC1-201ENST00000318607 LINGO3P0C6S8 592 aa15.11■□□□□ 0.01
PABPC1-201ENST00000318607 GYS1P13807 737 aa15.11■□□□□ 0.01
PABPC1-201ENST00000318607 CETN2P41208 172 aa15.11■□□□□ 0.01
PABPC1-201ENST00000318607 SERPINB4P48594 390 aa15.11■□□□□ 0.01
PABPC1-201ENST00000318607 NRLP54845 237 aa15.11■□□□□ 0.01
PABPC1-201ENST00000318607 BNIP1Q12981 228 aa15.11■□□□□ 0.01
PABPC1-201ENST00000318607 STRN3Q13033 797 aa15.11■□□□□ 0.01
PABPC1-201ENST00000318607 EFTUD2Q15029 972 aaKnown RBP eCLIP15.11■□□□□ 0.017e-11■■■□□ 17.5
PABPC1-201ENST00000318607 CTAGE3PQ8IX95 158 aa15.11■□□□□ 0.01
PABPC1-201ENST00000318607 EFCAB3Q8N7B9 438 aa15.11■□□□□ 0.01
PABPC1-201ENST00000318607 CCDC124Q96CT7 223 aaKnown RBP15.11■□□□□ 0.01
PABPC1-201ENST00000318607 GGA2Q9UJY4 613 aa15.11■□□□□ 0.01
PABPC1-201ENST00000318607 NHSQ6T4R5 1651 aa15.11■□□□□ 0.01
PABPC1-201ENST00000318607 CAPN9O14815 690 aa15.11■□□□□ 0.01
PABPC1-201ENST00000318607 RASSF2P50749 326 aa15.11■□□□□ 0.01
PABPC1-201ENST00000318607 GPS1Q13098 491 aa15.11■□□□□ 0.01
PABPC1-201ENST00000318607 DSTYKQ6XUX3 929 aa15.11■□□□□ 0.01
PABPC1-201ENST00000318607 SDAD1Q9NVU7 687 aaKnown RBP eCLIP15.11■□□□□ 0.01
PABPC1-201ENST00000318607 ABCB11O95342 1321 aa15.11■□□□□ 0.01
PABPC1-201ENST00000318607 E2F8A0AVK6 867 aa15.11■□□□□ 0.01
PABPC1-201ENST00000318607 STK10O94804 968 aaKnown RBP15.11■□□□□ 0.01
PABPC1-201ENST00000318607 NUDT17P0C025 328 aa15.11■□□□□ 0.01
PABPC1-201ENST00000318607 ATXN3P54252 364 aaPredicted RBP15.11■□□□□ 0.01
PABPC1-201ENST00000318607 ICA1Q05084 483 aa15.11■□□□□ 0.01
PABPC1-201ENST00000318607 BFSP1Q12934 665 aa15.11■□□□□ 0.01
PABPC1-201ENST00000318607 KHDC1Q4VXA5 237 aaKnown RBP15.11■□□□□ 0.01
PABPC1-201ENST00000318607 LVRNQ6Q4G3 990 aa15.11■□□□□ 0.01
PABPC1-201ENST00000318607 SLFN12Q8IYM2 578 aa15.11■□□□□ 0.01
PABPC1-201ENST00000318607 P3H4Q92791 437 aa15.11■□□□□ 0.01
PABPC1-201ENST00000318607 UTP4Q969X6 686 aaKnown RBP15.11■□□□□ 0.01
PABPC1-201ENST00000318607 RAB3IPQ96QF0 476 aaPredicted RBP15.11■□□□□ 0.01
PABPC1-201ENST00000318607 DENND2DQ9H6A0 471 aaPredicted RBP15.11■□□□□ 0.01
PABPC1-201ENST00000318607 SMYD3Q9H7B4 428 aa15.11■□□□□ 0.01
PABPC1-201ENST00000318607 SLTMQ9NWH9 1034 aaKnown RBP eCLIP15.11■□□□□ 0.01
PABPC1-201ENST00000318607 SGK1O00141 431 aa15.1■□□□□ 0.01
PABPC1-201ENST00000318607 GYG2O15488 501 aa15.1■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms