RNA–Protein interactions for RNA: ENST00000318266.9

PTPRA-202, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTPRA, Length 3,219 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-202ENST00000318266 WDR90Q96KV7 1748 aa10.3□□□□□ -0.76
PTPRA-202ENST00000318266 FAM196BA6NMK8 535 aa10.3□□□□□ -0.76
PTPRA-202ENST00000318266 IRF6O14896 467 aa10.3□□□□□ -0.76
PTPRA-202ENST00000318266 SGPL1O95470 568 aa10.3□□□□□ -0.76
PTPRA-202ENST00000318266 ALAS1P13196 640 aa10.3□□□□□ -0.76
PTPRA-202ENST00000318266 SP100P23497 879 aaPredicted RBP10.3□□□□□ -0.76
PTPRA-202ENST00000318266 CLK2P49760 499 aaKnown RBP10.3□□□□□ -0.76
PTPRA-202ENST00000318266 GSTO1P78417 241 aa10.3□□□□□ -0.76
PTPRA-202ENST00000318266 MRPS35P82673 323 aaKnown RBP10.3□□□□□ -0.76
PTPRA-202ENST00000318266 KHDC1Q4VXA5 237 aaKnown RBP10.3□□□□□ -0.76
PTPRA-202ENST00000318266 TAF1BQ53T94 588 aaPredicted RBP10.3□□□□□ -0.76
PTPRA-202ENST00000318266 CWF19L1Q69YN2 538 aaKnown RBP10.3□□□□□ -0.76
PTPRA-202ENST00000318266 TEX9Q8N6V9 391 aa10.3□□□□□ -0.76
PTPRA-202ENST00000318266 ZNF564Q8TBZ8 553 aaPredicted RBP10.3□□□□□ -0.76
PTPRA-202ENST00000318266 RPGRQ92834 1020 aaKnown RBP10.3□□□□□ -0.76
PTPRA-202ENST00000318266 SLC7A6OSQ96CW6 309 aaPredicted RBP10.3□□□□□ -0.76
PTPRA-202ENST00000318266 ANKRD2Q9GZV1 360 aa10.3□□□□□ -0.76
PTPRA-202ENST00000318266 NMRK1Q9NWW6 199 aa10.3□□□□□ -0.76
PTPRA-202ENST00000318266 SRP68Q9UHB9 627 aaKnown RBP10.3□□□□□ -0.76
PTPRA-202ENST00000318266 ANAPC5Q9UJX4 755 aa10.3□□□□□ -0.76
PTPRA-202ENST00000318266 RABGAP1Q9Y3P9 1069 aa10.3□□□□□ -0.76
PTPRA-202ENST00000318266 SLC16A3O15427 465 aaKnown RBP10.3□□□□□ -0.76
PTPRA-202ENST00000318266 T-ENOLP0DO92 83 aa10.3□□□□□ -0.76
PTPRA-202ENST00000318266 ATF2P15336 505 aa10.3□□□□□ -0.76
PTPRA-202ENST00000318266 KRT15P19012 456 aa10.3□□□□□ -0.76
PTPRA-202ENST00000318266 GCLMP48507 274 aa10.3□□□□□ -0.76
PTPRA-202ENST00000318266 RPS6KA3P51812 740 aa10.3□□□□□ -0.76
PTPRA-202ENST00000318266 CCNG1P51959 295 aa10.3□□□□□ -0.76
PTPRA-202ENST00000318266 ZNF543Q08ER8 600 aa10.3□□□□□ -0.76
PTPRA-202ENST00000318266 OVGP1Q12889 678 aa10.3□□□□□ -0.76
PTPRA-202ENST00000318266 SIX1Q15475 284 aaPredicted RBP10.3□□□□□ -0.76
PTPRA-202ENST00000318266 TMEM63BQ5T3F8 832 aa10.3□□□□□ -0.76
PTPRA-202ENST00000318266 CYFIP1Q7L576 1253 aa10.3□□□□□ -0.76
PTPRA-202ENST00000318266 SYCP3Q8IZU3 236 aa10.3□□□□□ -0.76
PTPRA-202ENST00000318266 ERMNQ8TAM6 284 aa10.3□□□□□ -0.76
PTPRA-202ENST00000318266 LRRC8CQ8TDW0 803 aa10.3□□□□□ -0.76
PTPRA-202ENST00000318266 ZNF653Q96CK0 615 aa10.3□□□□□ -0.76
PTPRA-202ENST00000318266 P2RX7Q99572 595 aaKnown RBP10.3□□□□□ -0.76
PTPRA-202ENST00000318266 NPHS2Q9NP85 383 aa10.3□□□□□ -0.76
PTPRA-202ENST00000318266 KCNQ5Q9NR82 932 aa10.3□□□□□ -0.76
PTPRA-202ENST00000318266 MYO3BQ8WXR4 1341 aa10.3□□□□□ -0.76
PTPRA-202ENST00000318266 ZBTB5O15062 677 aa10.29□□□□□ -0.76
PTPRA-202ENST00000318266 MAPK13O15264 365 aa10.29□□□□□ -0.76
PTPRA-202ENST00000318266 ZBTB7AO95365 584 aa10.29□□□□□ -0.76
PTPRA-202ENST00000318266 HOXA7P31268 230 aaPredicted RBP10.29□□□□□ -0.76
PTPRA-202ENST00000318266 HOXA13P31271 388 aaPredicted RBP10.29□□□□□ -0.76
PTPRA-202ENST00000318266 ARHGAP4P98171 946 aa10.29□□□□□ -0.76
PTPRA-202ENST00000318266 MTM1Q13496 603 aa10.29□□□□□ -0.76
PTPRA-202ENST00000318266 RCN1Q15293 331 aa10.29□□□□□ -0.76
PTPRA-202ENST00000318266 HS2ST1Q7LGA3 356 aa10.29□□□□□ -0.76
PTPRA-202ENST00000318266 AGGF1Q8N302 714 aaeCLIP10.29□□□□□ -0.76
PTPRA-202ENST00000318266 ASAP3Q8TDY4 903 aa10.29□□□□□ -0.76
PTPRA-202ENST00000318266 SLC5A5Q92911 643 aa10.29□□□□□ -0.76
PTPRA-202ENST00000318266 BORCS6Q96GS4 357 aa10.29□□□□□ -0.76
PTPRA-202ENST00000318266 DDX50Q9BQ39 737 aaKnown RBP10.29□□□□□ -0.76
PTPRA-202ENST00000318266 HERPUD2Q9BSE4 406 aa10.29□□□□□ -0.76
PTPRA-202ENST00000318266 TRIM4Q9C037 500 aa10.29□□□□□ -0.76
PTPRA-202ENST00000318266 ALG13Q9NP73 1137 aaKnown RBP10.29□□□□□ -0.76
PTPRA-202ENST00000318266 UBN1Q9NPG3 1134 aa10.29□□□□□ -0.76
PTPRA-202ENST00000318266 ZMYM2Q9UBW7 1377 aa10.29□□□□□ -0.76
PTPRA-202ENST00000318266 GTPBP10A4D1E9 387 aaKnown RBP10.29□□□□□ -0.76
PTPRA-202ENST00000318266 FAM47DPA6NHR8 397 aa10.29□□□□□ -0.76
PTPRA-202ENST00000318266 FAM86B1E9PN63 330 aa10.29□□□□□ -0.76
PTPRA-202ENST00000318266 hCG_1984214I3L0E3 225 aa10.29□□□□□ -0.76
PTPRA-202ENST00000318266 EML1O00423 815 aa10.29□□□□□ -0.76
PTPRA-202ENST00000318266 NVLO15381 856 aaKnown RBP10.29□□□□□ -0.76
PTPRA-202ENST00000318266 LDHCP07864 332 aa10.29□□□□□ -0.76
PTPRA-202ENST00000318266 FAM86B2P0C5J1 330 aa10.29□□□□□ -0.76
PTPRA-202ENST00000318266 SPIRE1Q08AE8 756 aa10.29□□□□□ -0.76
PTPRA-202ENST00000318266 QRICH1Q2TAL8 776 aa10.29□□□□□ -0.76
PTPRA-202ENST00000318266 NBPF20Q3BBV1 942 aa10.29□□□□□ -0.76
PTPRA-202ENST00000318266 C11orf63Q6NUN7 778 aa10.29□□□□□ -0.76
PTPRA-202ENST00000318266 DSTYKQ6XUX3 929 aa10.29□□□□□ -0.76
PTPRA-202ENST00000318266 ZNF713Q8N859 430 aaPredicted RBP10.29□□□□□ -0.76
PTPRA-202ENST00000318266 SNF8Q96H20 258 aa10.29□□□□□ -0.76
PTPRA-202ENST00000318266 C12orf65Q9H3J6 166 aaKnown RBP10.29□□□□□ -0.76
PTPRA-202ENST00000318266 GRID1Q9ULK0 1009 aa10.29□□□□□ -0.76
PTPRA-202ENST00000318266 R3HDM2Q9Y2K5 976 aaKnown RBP10.29□□□□□ -0.76
PTPRA-202ENST00000318266 USH1CQ9Y6N9 552 aa10.29□□□□□ -0.76
PTPRA-202ENST00000318266 TNRC6CQ9HCJ0 1690 aaKnown RBP10.29□□□□□ -0.76
PTPRA-202ENST00000318266 TAF1LQ8IZX4 1826 aa10.29□□□□□ -0.76
PTPRA-202ENST00000318266 CYP26A1O43174 497 aa10.29□□□□□ -0.76
PTPRA-202ENST00000318266 CDH16O75309 829 aa10.29□□□□□ -0.76
PTPRA-202ENST00000318266 KRT36O76013 467 aa10.29□□□□□ -0.76
PTPRA-202ENST00000318266 WFS1O76024 890 aa10.29□□□□□ -0.76
PTPRA-202ENST00000318266 CA4P22748 312 aa10.29□□□□□ -0.76
PTPRA-202ENST00000318266 RRM1P23921 792 aa10.29□□□□□ -0.76
PTPRA-202ENST00000318266 RPA1P27694 616 aa10.29□□□□□ -0.76
PTPRA-202ENST00000318266 SMARCA1P28370 1054 aa10.29□□□□□ -0.76
PTPRA-202ENST00000318266 MKRN3Q13064 507 aaKnown RBP10.29□□□□□ -0.76
PTPRA-202ENST00000318266 IKQ13123 557 aaPredicted RBP10.29□□□□□ -0.76
PTPRA-202ENST00000318266 SHROOM1Q2M3G4 852 aaPredicted RBP10.29□□□□□ -0.76
PTPRA-202ENST00000318266 EPC2Q52LR7 807 aa10.29□□□□□ -0.76
PTPRA-202ENST00000318266 LLGL2Q6P1M3 1020 aa10.29□□□□□ -0.76
PTPRA-202ENST00000318266 PPP1R21Q6ZMI0 780 aa10.29□□□□□ -0.76
PTPRA-202ENST00000318266 MTDHQ86UE4 582 aaKnown RBP10.29□□□□□ -0.76
PTPRA-202ENST00000318266 SLC47A2Q86VL8 602 aa10.29□□□□□ -0.76
PTPRA-202ENST00000318266 PPM1KQ8N3J5 372 aa10.29□□□□□ -0.76
PTPRA-202ENST00000318266 EMSYQ7Z589 1322 aa10.29□□□□□ -0.76
PTPRA-202ENST00000318266 EXOC1LA0A1B0GW35 172 aa10.28□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 58.6 ms