RNA–Protein interactions for RNA: ENST00000316763.7

VRK3-201, Transcript of vaccinia related kinase 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VRK3, Length 1,938 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-201ENST00000316763 VAMP7P51809 220 aa15.29■□□□□ 0.04
VRK3-201ENST00000316763 TARBP2Q15633 366 aaKnown RBP15.29■□□□□ 0.04
VRK3-201ENST00000316763 MAEAQ7L5Y9 396 aa15.29■□□□□ 0.04
VRK3-201ENST00000316763 GLYCTKQ8IVS8 523 aa15.29■□□□□ 0.04
VRK3-201ENST00000316763 EIF1ADQ8N9N8 165 aaKnown RBP15.29■□□□□ 0.04
VRK3-201ENST00000316763 RDH13Q8NBN7 331 aa15.29■□□□□ 0.04
VRK3-201ENST00000316763 MCPH1Q8NEM0 835 aa15.29■□□□□ 0.04
VRK3-201ENST00000316763 LNX1Q8TBB1 728 aaPredicted RBP15.29■□□□□ 0.04
VRK3-201ENST00000316763 RFFLQ8WZ73 363 aa15.29■□□□□ 0.04
VRK3-201ENST00000316763 BUD13Q9BRD0 619 aaKnown RBP eCLIP15.29■□□□□ 0.041e-6■■■□□ 15.1
VRK3-201ENST00000316763 ST6GALNAC4Q9H4F1 302 aa15.29■□□□□ 0.04
VRK3-201ENST00000316763 AZI2Q9H6S1 392 aa15.29■□□□□ 0.04
VRK3-201ENST00000316763 GPRC5CQ9NQ84 441 aa15.29■□□□□ 0.04
VRK3-201ENST00000316763 XPNPEP1Q9NQW7 623 aa15.29■□□□□ 0.04
VRK3-201ENST00000316763 ZNF865P0CJ78 1059 aaPredicted RBP15.28■□□□□ 0.04
VRK3-201ENST00000316763 CARSP49589 748 aaKnown RBP15.28■□□□□ 0.04
VRK3-201ENST00000316763 RTP1P59025 263 aa15.28■□□□□ 0.04
VRK3-201ENST00000316763 CACNB2Q08289 660 aaPredicted RBP15.28■□□□□ 0.04
VRK3-201ENST00000316763 DUSP28Q4G0W2 176 aa15.28■□□□□ 0.04
VRK3-201ENST00000316763 IQSEC1Q6DN90 963 aa15.28■□□□□ 0.04
VRK3-201ENST00000316763 CTU1Q7Z7A3 348 aaKnown RBP15.28■□□□□ 0.04
VRK3-201ENST00000316763 KLHL7Q8IXQ5 586 aa15.28■□□□□ 0.04
VRK3-201ENST00000316763 XXYLT1Q8NBI6 393 aa15.28■□□□□ 0.04
VRK3-201ENST00000316763 PPTC7Q8NI37 304 aa15.28■□□□□ 0.04
VRK3-201ENST00000316763 RIN2Q8WYP3 895 aaPredicted RBP15.28■□□□□ 0.04
VRK3-201ENST00000316763 KIFAP3Q92845 792 aa15.28■□□□□ 0.04
VRK3-201ENST00000316763 SH3GL2Q99962 352 aa15.28■□□□□ 0.04
VRK3-201ENST00000316763 DHX33Q9H6R0 707 aaKnown RBP15.28■□□□□ 0.04
VRK3-201ENST00000316763 C17orf75Q9HAS0 396 aa15.28■□□□□ 0.04
VRK3-201ENST00000316763 NRBP2Q9NSY0 501 aa15.28■□□□□ 0.04
VRK3-201ENST00000316763 NFU1Q9UMS0 254 aa15.28■□□□□ 0.04
VRK3-201ENST00000316763 STXBP5LQ9Y2K9 1186 aa15.28■□□□□ 0.04
VRK3-201ENST00000316763 PPME1Q9Y570 386 aa15.28■□□□□ 0.04
VRK3-201ENST00000316763 C11orf97A0A1B0GVM6 126 aaPredicted RBP15.27■□□□□ 0.04
VRK3-201ENST00000316763 HMGCRP04035 888 aa15.27■□□□□ 0.04
VRK3-201ENST00000316763 GRK4P32298 578 aa15.27■□□□□ 0.04
VRK3-201ENST00000316763 SLC26A2P50443 739 aa15.27■□□□□ 0.04
VRK3-201ENST00000316763 ARHGAP44Q17R89 818 aa15.27■□□□□ 0.04
VRK3-201ENST00000316763 GJC2Q5T442 439 aaPredicted RBP15.27■□□□□ 0.04
VRK3-201ENST00000316763 FAM102BQ5T8I3 360 aa15.27■□□□□ 0.04
VRK3-201ENST00000316763 NT5DC3Q86UY8 548 aa15.27■□□□□ 0.04
VRK3-201ENST00000316763 MREGQ8N565 214 aa15.27■□□□□ 0.04
VRK3-201ENST00000316763 METTL13Q8N6R0 699 aa15.27■□□□□ 0.04
VRK3-201ENST00000316763 SLAIN1Q8ND83 568 aa15.27■□□□□ 0.04
VRK3-201ENST00000316763 TRPV1Q8NER1 839 aa15.27■□□□□ 0.04
VRK3-201ENST00000316763 FAM167AQ96KS9 214 aa15.27■□□□□ 0.04
VRK3-201ENST00000316763 NTPCRQ9BSD7 190 aaKnown RBP15.27■□□□□ 0.04
VRK3-201ENST00000316763 PCIF1Q9H4Z3 704 aa15.27■□□□□ 0.04
VRK3-201ENST00000316763 ATP6V0A4Q9HBG4 840 aa15.27■□□□□ 0.04
VRK3-201ENST00000316763 EXOC7Q9UPT5 735 aa15.27■□□□□ 0.04
VRK3-201ENST00000316763 RAD51CO43502 376 aa15.27■□□□□ 0.03
VRK3-201ENST00000316763 SMPD1P17405 629 aa15.27■□□□□ 0.03
VRK3-201ENST00000316763 GTF2BQ00403 316 aa15.27■□□□□ 0.03
VRK3-201ENST00000316763 CUL1Q13616 776 aa15.27■□□□□ 0.03
VRK3-201ENST00000316763 MTERF2Q49AM1 385 aa15.27■□□□□ 0.03
VRK3-201ENST00000316763 CFAP58Q5T655 872 aa15.27■□□□□ 0.03
VRK3-201ENST00000316763 HAUS6Q7Z4H7 955 aa15.27■□□□□ 0.03
VRK3-201ENST00000316763 RASGEF1CQ8N431 466 aa15.27■□□□□ 0.03
VRK3-201ENST00000316763 SLC35G2Q8TBE7 412 aa15.27■□□□□ 0.03
VRK3-201ENST00000316763 CASKIN2Q8WXE0 1202 aa15.27■□□□□ 0.03
VRK3-201ENST00000316763 BBXQ8WY36 941 aaPredicted RBP15.27■□□□□ 0.03
VRK3-201ENST00000316763 GLG1Q92896 1179 aa15.27■□□□□ 0.03
VRK3-201ENST00000316763 SYT11Q9BT88 431 aa15.27■□□□□ 0.03
VRK3-201ENST00000316763 GPR88Q9GZN0 384 aa15.27■□□□□ 0.03
VRK3-201ENST00000316763 SMARCAD1Q9H4L7 1026 aa15.27■□□□□ 0.03
VRK3-201ENST00000316763 SEPT11Q9NVA2 429 aaKnown RBP15.27■□□□□ 0.03
VRK3-201ENST00000316763 HTTP42858 3142 aa15.26■□□□□ 0.03
VRK3-201ENST00000316763 ANKRD62A6NC57 917 aa15.26■□□□□ 0.03
VRK3-201ENST00000316763 HOXD8P13378 290 aaPredicted RBP15.26■□□□□ 0.03
VRK3-201ENST00000316763 CYBAP13498 195 aa15.26■□□□□ 0.03
VRK3-201ENST00000316763 NCKAP1LP55160 1127 aa15.26■□□□□ 0.03
VRK3-201ENST00000316763 CLUL1Q15846 466 aa15.26■□□□□ 0.03
VRK3-201ENST00000316763 TRIM50Q86XT4 487 aa15.26■□□□□ 0.03
VRK3-201ENST00000316763 DNAAF5Q86Y56 855 aa15.26■□□□□ 0.03
VRK3-201ENST00000316763 TSEN2Q8NCE0 465 aaKnown RBP15.26■□□□□ 0.03
VRK3-201ENST00000316763 LMO3Q8TAP4 145 aa15.26■□□□□ 0.03
VRK3-201ENST00000316763 ATP8B4Q8TF62 1192 aa15.26■□□□□ 0.03
VRK3-201ENST00000316763 SPIRE2Q8WWL2 714 aa15.26■□□□□ 0.03
VRK3-201ENST00000316763 HES6Q96HZ4 224 aa15.26■□□□□ 0.03
VRK3-201ENST00000316763 AGPAT1Q99943 283 aa15.26■□□□□ 0.03
VRK3-201ENST00000316763 GOLPH3Q9H4A6 298 aa15.26■□□□□ 0.03
VRK3-201ENST00000316763 UBE2TQ9NPD8 197 aaPredicted RBP15.26■□□□□ 0.03
VRK3-201ENST00000316763 HSPBP1Q9NZL4 362 aa15.26■□□□□ 0.03
VRK3-201ENST00000316763 NOC2LQ9Y3T9 749 aaKnown RBP15.26■□□□□ 0.03
VRK3-201ENST00000316763 CENPFP49454 3210 aa15.26■□□□□ 0.03
VRK3-201ENST00000316763 MYH9P35579 1960 aaKnown RBP15.26■□□□□ 0.03
VRK3-201ENST00000316763 KRIT1O00522 736 aa15.25■□□□□ 0.03
VRK3-201ENST00000316763 PMM2O15305 246 aa15.25■□□□□ 0.03
VRK3-201ENST00000316763 PRKAR2AP13861 404 aaKnown RBP15.25■□□□□ 0.03
VRK3-201ENST00000316763 RFC5P40937 340 aa15.25■□□□□ 0.03
VRK3-201ENST00000316763 SMTNP53814 917 aa15.25■□□□□ 0.03
VRK3-201ENST00000316763 EMC2Q15006 297 aa15.25■□□□□ 0.03
VRK3-201ENST00000316763 PHLDB3Q6NSJ2 640 aa15.25■□□□□ 0.03
VRK3-201ENST00000316763 CCDC26Q8TAB7 109 aa15.25■□□□□ 0.03
VRK3-201ENST00000316763 SH3TC2Q8TF17 1288 aa15.25■□□□□ 0.03
VRK3-201ENST00000316763 AFG1LQ8WV93 481 aa15.25■□□□□ 0.03
VRK3-201ENST00000316763 HVCN1Q96D96 273 aa15.25■□□□□ 0.03
VRK3-201ENST00000316763 ISCUQ9H1K1 167 aa15.25■□□□□ 0.03
VRK3-201ENST00000316763 SLITRK6Q9H5Y7 841 aa15.25■□□□□ 0.03
VRK3-201ENST00000316763 ARID2Q68CP9 1835 aa15.25■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms