RNA–Protein interactions for RNA: ENST00000315962.8

TRIM55-202, Transcript of tripartite motif containing 55, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM55, Length 2,914 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55-202ENST00000315962 SMIM23A6NLE4 172 aa8.19□□□□□ -1.1
TRIM55-202ENST00000315962 DCDC2CA8MYV0 355 aa8.19□□□□□ -1.1
TRIM55-202ENST00000315962 IQCF3P0C7M6 154 aa8.19□□□□□ -1.1
TRIM55-202ENST00000315962 HUNKP57058 714 aa8.19□□□□□ -1.1
TRIM55-202ENST00000315962 CDK17Q00537 523 aa8.19□□□□□ -1.1
TRIM55-202ENST00000315962 NEDD9Q14511 834 aa8.19□□□□□ -1.1
TRIM55-202ENST00000315962 DAB2IPQ5VWQ8 1189 aa8.19□□□□□ -1.1
TRIM55-202ENST00000315962 MMS22LQ6ZRQ5 1243 aa8.19□□□□□ -1.1
TRIM55-202ENST00000315962 PNMA8AQ86V59 439 aaPredicted RBP8.19□□□□□ -1.1
TRIM55-202ENST00000315962 CPNE8Q86YQ8 564 aa8.19□□□□□ -1.1
TRIM55-202ENST00000315962 KIRREL3Q8IZU9 778 aa8.19□□□□□ -1.1
TRIM55-202ENST00000315962 MCPH1Q8NEM0 835 aa8.19□□□□□ -1.1
TRIM55-202ENST00000315962 MINDY3Q9H8M7 445 aa8.19□□□□□ -1.1
TRIM55-202ENST00000315962 PNMA2Q9UL42 364 aa8.19□□□□□ -1.1
TRIM55-202ENST00000315962 IGSF9BQ9UPX0 1349 aa8.18□□□□□ -1.1
TRIM55-202ENST00000315962 SSU72P8A0A1W2PR75 194 aa8.18□□□□□ -1.1
TRIM55-202ENST00000315962 ADCY6O43306 1168 aa8.18□□□□□ -1.1
TRIM55-202ENST00000315962 RAD51CO43502 376 aa8.18□□□□□ -1.1
TRIM55-202ENST00000315962 SHOX2O60902 331 aaPredicted RBP8.18□□□□□ -1.1
TRIM55-202ENST00000315962 EDNRBP24530 442 aa8.18□□□□□ -1.1
TRIM55-202ENST00000315962 MCM3P25205 808 aa8.18□□□□□ -1.1
TRIM55-202ENST00000315962 FLT3P36888 993 aa8.18□□□□□ -1.1
TRIM55-202ENST00000315962 GALCP54803 685 aa8.18□□□□□ -1.1
TRIM55-202ENST00000315962 JAM2P57087 298 aa8.18□□□□□ -1.1
TRIM55-202ENST00000315962 PLCB4Q15147 1175 aa8.18□□□□□ -1.1
TRIM55-202ENST00000315962 CELF3Q5SZQ8 465 aaKnown RBP8.18□□□□□ -1.1
TRIM55-202ENST00000315962 PASD1Q8IV76 773 aa8.18□□□□□ -1.1
TRIM55-202ENST00000315962 TMEM192Q8IY95 271 aa8.18□□□□□ -1.1
TRIM55-202ENST00000315962 OR5B17Q8NGF7 314 aa8.18□□□□□ -1.1
TRIM55-202ENST00000315962 UHMK1Q8TAS1 419 aaKnown RBP8.18□□□□□ -1.1
TRIM55-202ENST00000315962 KREMEN1Q96MU8 473 aa8.18□□□□□ -1.1
TRIM55-202ENST00000315962 FNBP1Q96RU3 617 aa8.18□□□□□ -1.1
TRIM55-202ENST00000315962 SENP7Q9BQF6 1050 aa8.18□□□□□ -1.1
TRIM55-202ENST00000315962 MSTO1Q9BUK6 570 aa8.18□□□□□ -1.1
TRIM55-202ENST00000315962 DHX33Q9H6R0 707 aaKnown RBP8.18□□□□□ -1.1
TRIM55-202ENST00000315962 AGO2Q9UKV8 859 aaKnown RBP8.18□□□□□ -1.1
TRIM55-202ENST00000315962 SBF1O95248 1867 aa8.18□□□□□ -1.1
TRIM55-202ENST00000315962 MYPNQ86TC9 1320 aa8.18□□□□□ -1.1
TRIM55-202ENST00000315962 ANO9A1A5B4 782 aa8.18□□□□□ -1.1
TRIM55-202ENST00000315962 KCNK3O14649 394 aa8.18□□□□□ -1.1
TRIM55-202ENST00000315962 MMEP08473 750 aa8.18□□□□□ -1.1
TRIM55-202ENST00000315962 CFHP08603 1231 aa8.18□□□□□ -1.1
TRIM55-202ENST00000315962 LSP1P33241 339 aa8.18□□□□□ -1.1
TRIM55-202ENST00000315962 EPHB4P54760 987 aa8.18□□□□□ -1.1
TRIM55-202ENST00000315962 ORC1Q13415 861 aa8.18□□□□□ -1.1
TRIM55-202ENST00000315962 EFCAB12Q6NXP0 572 aa8.18□□□□□ -1.1
TRIM55-202ENST00000315962 DAAM2Q86T65 1068 aa8.18□□□□□ -1.1
TRIM55-202ENST00000315962 OTUD6BQ8N6M0 293 aa8.18□□□□□ -1.1
TRIM55-202ENST00000315962 ARHGEF26Q96DR7 871 aa8.18□□□□□ -1.1
TRIM55-202ENST00000315962 NTPCRQ9BSD7 190 aaKnown RBP8.18□□□□□ -1.1
TRIM55-202ENST00000315962 STK33Q9BYT3 514 aa8.18□□□□□ -1.1
TRIM55-202ENST00000315962 NRBP2Q9NSY0 501 aa8.18□□□□□ -1.1
TRIM55-202ENST00000315962 EXOC7Q9UPT5 735 aa8.18□□□□□ -1.1
TRIM55-202ENST00000315962 PLAAQ9Y263 795 aa8.18□□□□□ -1.1
TRIM55-202ENST00000315962 NFASCO94856 1347 aa8.18□□□□□ -1.1
TRIM55-202ENST00000315962 GRID2IPA4D2P6 1211 aa8.17□□□□□ -1.1
TRIM55-202ENST00000315962 ZBTB42B2RXF5 422 aa8.17□□□□□ -1.1
TRIM55-202ENST00000315962 CLDN3O15551 220 aa8.17□□□□□ -1.1
TRIM55-202ENST00000315962 KIAA0754O94854 1291 aa8.17□□□□□ -1.1
TRIM55-202ENST00000315962 ATG7O95352 703 aa8.17□□□□□ -1.1
TRIM55-202ENST00000315962 CD58P19256 250 aa8.17□□□□□ -1.1
TRIM55-202ENST00000315962 NR1D1P20393 614 aa8.17□□□□□ -1.1
TRIM55-202ENST00000315962 TNFAIP3P21580 790 aa8.17□□□□□ -1.1
TRIM55-202ENST00000315962 LAMTOR4Q0VGL1 99 aa8.17□□□□□ -1.1
TRIM55-202ENST00000315962 CETN1Q12798 172 aa8.17□□□□□ -1.1
TRIM55-202ENST00000315962 PRPF4BQ13523 1007 aaKnown RBP8.17□□□□□ -1.1
TRIM55-202ENST00000315962 NAB2Q15742 525 aa8.17□□□□□ -1.1
TRIM55-202ENST00000315962 AADACL2Q6P093 401 aa8.17□□□□□ -1.1
TRIM55-202ENST00000315962 FOXR2Q6PJQ5 311 aa8.17□□□□□ -1.1
TRIM55-202ENST00000315962 RPUSD2Q8IZ73 545 aaKnown RBP8.17□□□□□ -1.1
TRIM55-202ENST00000315962 GPD1LQ8N335 351 aa8.17□□□□□ -1.1
TRIM55-202ENST00000315962 MMGT1Q8N4V1 131 aa8.17□□□□□ -1.1
TRIM55-202ENST00000315962 KCTD17Q8N5Z5 321 aa8.17□□□□□ -1.1
TRIM55-202ENST00000315962 SAMD3Q8N6K7 520 aa8.17□□□□□ -1.1
TRIM55-202ENST00000315962 SCLT1Q96NL6 688 aa8.17□□□□□ -1.1
TRIM55-202ENST00000315962 ZIC5Q96T25 663 aa8.17□□□□□ -1.1
TRIM55-202ENST00000315962 MKNK1Q9BUB5 465 aa8.17□□□□□ -1.1
TRIM55-202ENST00000315962 DDX47Q9H0S4 455 aaKnown RBP8.17□□□□□ -1.1
TRIM55-202ENST00000315962 NEUROG2Q9H2A3 272 aa8.17□□□□□ -1.1
TRIM55-202ENST00000315962 DPH5Q9H2P9 285 aa8.17□□□□□ -1.1
TRIM55-202ENST00000315962 RAB20Q9NX57 234 aa8.17□□□□□ -1.1
TRIM55-202ENST00000315962 RBAKQ9NYW8 714 aaPredicted RBP8.17□□□□□ -1.1
TRIM55-202ENST00000315962 ARHGAP28Q9P2N2 729 aa8.17□□□□□ -1.1
TRIM55-202ENST00000315962 UMODL1Q5DID0 1318 aa8.17□□□□□ -1.1
TRIM55-202ENST00000315962 DNAJC25-GNG10A0A024R161 153 aa8.17□□□□□ -1.1
TRIM55-202ENST00000315962 HGSO14964 777 aaPredicted RBP8.17□□□□□ -1.1
TRIM55-202ENST00000315962 SLC25A27O95847 323 aa8.17□□□□□ -1.1
TRIM55-202ENST00000315962 CST3P01034 146 aaPredicted RBP8.17□□□□□ -1.1
TRIM55-202ENST00000315962 FTLP02792 175 aaPredicted RBP8.17□□□□□ -1.1
TRIM55-202ENST00000315962 TUBBP07437 444 aa8.17□□□□□ -1.1
TRIM55-202ENST00000315962 INSRRP14616 1297 aa8.17□□□□□ -1.1
TRIM55-202ENST00000315962 ICAM3P32942 547 aa8.17□□□□□ -1.1
TRIM55-202ENST00000315962 ZNF157P51786 506 aaPredicted RBP8.17□□□□□ -1.1
TRIM55-202ENST00000315962 CYP24A1Q07973 514 aa8.17□□□□□ -1.1
TRIM55-202ENST00000315962 ZNF211Q13398 564 aaPredicted RBP8.17□□□□□ -1.1
TRIM55-202ENST00000315962 PPP2R5AQ15172 486 aa8.17□□□□□ -1.1
TRIM55-202ENST00000315962 CCL14Q16627 93 aa8.17□□□□□ -1.1
TRIM55-202ENST00000315962 BRDTQ58F21 947 aaPredicted RBP8.17□□□□□ -1.1
TRIM55-202ENST00000315962 KRT39Q6A163 491 aa8.17□□□□□ -1.1
TRIM55-202ENST00000315962 CRELD2Q6UXH1 353 aaPredicted RBP8.17□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms