RNA–Protein interactions for RNA: ENST00000314759.5

SKA3-202, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SKA3, Length 2,919 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-202ENST00000314759 CHST7Q9NS84 486 aa14.37□□□□□ -0.11
SKA3-202ENST00000314759 ASIC3Q9UHC3 531 aa14.37□□□□□ -0.11
SKA3-202ENST00000314759 TAF1LQ8IZX4 1826 aa14.37□□□□□ -0.11
SKA3-202ENST00000314759 ARHGEF35A5YM69 484 aa14.37□□□□□ -0.11
SKA3-202ENST00000314759 KIF3CO14782 793 aa14.37□□□□□ -0.11
SKA3-202ENST00000314759 ARP10275 920 aa14.37□□□□□ -0.11
SKA3-202ENST00000314759 ITIH2P19823 946 aa14.37□□□□□ -0.11
SKA3-202ENST00000314759 ABCB5Q2M3G0 1257 aa14.37□□□□□ -0.11
SKA3-202ENST00000314759 ATG4AQ8WYN0 398 aa14.37□□□□□ -0.11
SKA3-202ENST00000314759 CNKSR1Q969H4 720 aa14.37□□□□□ -0.11
SKA3-202ENST00000314759 RMDN2Q96LZ7 410 aa14.37□□□□□ -0.11
SKA3-202ENST00000314759 YIPF3Q9GZM5 350 aa14.37□□□□□ -0.11
SKA3-202ENST00000314759 TMEM117Q9H0C3 514 aa14.37□□□□□ -0.11
SKA3-202ENST00000314759 GTF3C4Q9UKN8 822 aa14.37□□□□□ -0.11
SKA3-202ENST00000314759 O00370 1275 aa14.36□□□□□ -0.11
SKA3-202ENST00000314759 BRAFP15056 766 aa14.36□□□□□ -0.11
SKA3-202ENST00000314759 MUTP22033 750 aa14.36□□□□□ -0.11
SKA3-202ENST00000314759 TRIP13Q15645 432 aaPredicted RBP14.36□□□□□ -0.11
SKA3-202ENST00000314759 CGB2Q6NT52 195 aa14.36□□□□□ -0.11
SKA3-202ENST00000314759 ASRGL1Q7L266 308 aa14.36□□□□□ -0.11
SKA3-202ENST00000314759 PPM1KQ8N3J5 372 aa14.36□□□□□ -0.11
SKA3-202ENST00000314759 PARD3BQ8TEW8 1205 aa14.36□□□□□ -0.11
SKA3-202ENST00000314759 SAAL1Q96ER3 474 aa14.36□□□□□ -0.11
SKA3-202ENST00000314759 ZDHHC15Q96MV8 337 aa14.36□□□□□ -0.11
SKA3-202ENST00000314759 PWWP2AQ96N64 755 aa14.36□□□□□ -0.11
SKA3-202ENST00000314759 RXFP1Q9HBX9 757 aa14.36□□□□□ -0.11
SKA3-202ENST00000314759 KCNQ5Q9NR82 932 aa14.36□□□□□ -0.11
SKA3-202ENST00000314759 LRRC4BQ9NT99 713 aa14.36□□□□□ -0.11
SKA3-202ENST00000314759 A0A1W2PRG0 241 aa14.36□□□□□ -0.11
SKA3-202ENST00000314759 ATP5DP30049 168 aa14.36□□□□□ -0.11
SKA3-202ENST00000314759 ITGA8P53708 1063 aa14.36□□□□□ -0.11
SKA3-202ENST00000314759 MGAT5Q09328 741 aa14.36□□□□□ -0.11
SKA3-202ENST00000314759 CEP55Q53EZ4 464 aa14.36□□□□□ -0.11
SKA3-202ENST00000314759 ZBTB10Q96DT7 871 aa14.36□□□□□ -0.11
SKA3-202ENST00000314759 ZNF577Q9BSK1 485 aa14.36□□□□□ -0.11
SKA3-202ENST00000314759 LINGO3P0C6S8 592 aa14.35□□□□□ -0.11
SKA3-202ENST00000314759 CETPP11597 493 aa14.35□□□□□ -0.11
SKA3-202ENST00000314759 PADI6Q6TGC4 694 aa14.35□□□□□ -0.11
SKA3-202ENST00000314759 SEPT14Q6ZU15 432 aa14.35□□□□□ -0.11
SKA3-202ENST00000314759 C7orf43Q8WVR3 580 aa14.35□□□□□ -0.11
SKA3-202ENST00000314759 SNF8Q96H20 258 aa14.35□□□□□ -0.11
SKA3-202ENST00000314759 TGS1Q96RS0 853 aaKnown RBP14.35□□□□□ -0.11
SKA3-202ENST00000314759 HERPUD2Q9BSE4 406 aa14.35□□□□□ -0.11
SKA3-202ENST00000314759 HSPBP1Q9NZL4 362 aa14.35□□□□□ -0.11
SKA3-202ENST00000314759 UVRAGQ9P2Y5 699 aa14.35□□□□□ -0.11
SKA3-202ENST00000314759 NKX1-2Q9UD57 310 aaPredicted RBP14.35□□□□□ -0.11
SKA3-202ENST00000314759 CYP11B1P15538 503 aa14.35□□□□□ -0.11
SKA3-202ENST00000314759 MXI1P50539 228 aa14.35□□□□□ -0.11
SKA3-202ENST00000314759 SARNPP82979 210 aaKnown RBP14.35□□□□□ -0.11
SKA3-202ENST00000314759 BLMHQ13867 455 aa14.35□□□□□ -0.11
SKA3-202ENST00000314759 B3GNT9Q6UX72 402 aa14.35□□□□□ -0.11
SKA3-202ENST00000314759 ANKLE1Q8NAG6 615 aa14.35□□□□□ -0.11
SKA3-202ENST00000314759 XXYLT1Q8NBI6 393 aa14.35□□□□□ -0.11
SKA3-202ENST00000314759 SLC17A8Q8NDX2 589 aa14.35□□□□□ -0.11
SKA3-202ENST00000314759 SPDYE1Q8NFV5 336 aaPredicted RBP14.35□□□□□ -0.11
SKA3-202ENST00000314759 SEMA4DQ92854 862 aa14.35□□□□□ -0.11
SKA3-202ENST00000314759 TMEM206Q9H813 350 aa14.35□□□□□ -0.11
SKA3-202ENST00000314759 TBK1Q9UHD2 729 aa14.35□□□□□ -0.11
SKA3-202ENST00000314759 CORO1CQ9ULV4 474 aaPredicted RBP14.35□□□□□ -0.11
SKA3-202ENST00000314759 TULP1O00294 542 aaPredicted RBP14.35□□□□□ -0.11
SKA3-202ENST00000314759 GH2P01242 217 aa14.35□□□□□ -0.11
SKA3-202ENST00000314759 ATP2A2P16615 1042 aaKnown RBP14.35□□□□□ -0.11
SKA3-202ENST00000314759 ADCY1Q08828 1119 aa14.35□□□□□ -0.11
SKA3-202ENST00000314759 TNIP1Q15025 636 aa14.35□□□□□ -0.11
SKA3-202ENST00000314759 THEMIS2Q5TEJ8 643 aa14.35□□□□□ -0.11
SKA3-202ENST00000314759 KIAA0825Q8IV33 1275 aa14.35□□□□□ -0.11
SKA3-202ENST00000314759 SHC3Q92529 594 aa14.35□□□□□ -0.11
SKA3-202ENST00000314759 WDR11Q9BZH6 1224 aa14.35□□□□□ -0.11
SKA3-202ENST00000314759 SPATS2LQ9NUQ6 558 aaKnown RBP14.35□□□□□ -0.11
SKA3-202ENST00000314759 KLRG2A4D1S0 409 aaPredicted RBP14.34□□□□□ -0.11
SKA3-202ENST00000314759 THAP12O43422 761 aa14.34□□□□□ -0.11
SKA3-202ENST00000314759 STX2P32856 288 aa14.34□□□□□ -0.11
SKA3-202ENST00000314759 RNASELQ05823 741 aaKnown RBP14.34□□□□□ -0.11
SKA3-202ENST00000314759 VPS72Q15906 364 aa14.34□□□□□ -0.11
SKA3-202ENST00000314759 EGFL6Q8IUX8 553 aa14.34□□□□□ -0.11
SKA3-202ENST00000314759 TMEM174Q8WUU8 243 aa14.34□□□□□ -0.11
SKA3-202ENST00000314759 IFT74Q96LB3 600 aa14.34□□□□□ -0.11
SKA3-202ENST00000314759 PLCD4Q9BRC7 762 aa14.34□□□□□ -0.11
SKA3-202ENST00000314759 IDI2Q9BXS1 227 aa14.34□□□□□ -0.11
SKA3-202ENST00000314759 NINJ2Q9NZG7 142 aa14.34□□□□□ -0.11
SKA3-202ENST00000314759 LARSQ9P2J5 1176 aaKnown RBP14.34□□□□□ -0.11
SKA3-202ENST00000314759 RBBP6Q7Z6E9 1792 aaKnown RBP14.34□□□□□ -0.11
SKA3-202ENST00000314759 TCEA3O75764 348 aa14.34□□□□□ -0.11
SKA3-202ENST00000314759 POLR2MP0CAP2 368 aa14.34□□□□□ -0.11
SKA3-202ENST00000314759 CDR2Q01850 454 aa14.34□□□□□ -0.11
SKA3-202ENST00000314759 PTK6Q13882 451 aa14.34□□□□□ -0.11
SKA3-202ENST00000314759 C12orf56Q8IXR9 622 aa14.34□□□□□ -0.11
SKA3-202ENST00000314759 SRRM1Q8IYB3 904 aaKnown RBP14.34□□□□□ -0.11
SKA3-202ENST00000314759 RNF217Q8TC41 542 aa14.34□□□□□ -0.11
SKA3-202ENST00000314759 UTP4Q969X6 686 aaKnown RBP14.34□□□□□ -0.11
SKA3-202ENST00000314759 ACCSQ96QU6 501 aa14.34□□□□□ -0.11
SKA3-202ENST00000314759 TRIM7Q9C029 511 aa14.34□□□□□ -0.11
SKA3-202ENST00000314759 ZMYND8Q9ULU4 1186 aaPredicted RBP14.34□□□□□ -0.11
SKA3-202ENST00000314759 NAALADL1Q9UQQ1 740 aa14.34□□□□□ -0.11
SKA3-202ENST00000314759 USP20Q9Y2K6 914 aa14.34□□□□□ -0.11
SKA3-202ENST00000314759 GOLGA8IPA6NC78 632 aa14.33□□□□□ -0.12
SKA3-202ENST00000314759 GOLGA8JA6NMD2 632 aa14.33□□□□□ -0.12
SKA3-202ENST00000314759 DDX39AO00148 427 aaKnown RBP14.33□□□□□ -0.12
SKA3-202ENST00000314759 IPO5O00410 1097 aaKnown RBP14.33□□□□□ -0.12
SKA3-202ENST00000314759 GRIN3BO60391 1043 aa14.33□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms