RNA–Protein interactions for RNA: ENST00000314355.6

CKS2-201, Transcript of CDC28 protein kinase regulatory subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CKS2, Length 613 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS2-201ENST00000314355 MCF2P10911 925 aa13.91□□□□□ -0.18
CKS2-201ENST00000314355 PLS3P13797 630 aa13.91□□□□□ -0.18
CKS2-201ENST00000314355 SCP2P22307 547 aa13.91□□□□□ -0.18
CKS2-201ENST00000314355 ABCD1P33897 745 aa13.91□□□□□ -0.18
CKS2-201ENST00000314355 GRM5P41594 1212 aa13.91□□□□□ -0.18
CKS2-201ENST00000314355 OSTNP61366 133 aa13.91□□□□□ -0.18
CKS2-201ENST00000314355 RAD51AP2Q09MP3 1159 aa13.91□□□□□ -0.18
CKS2-201ENST00000314355 PSMD5Q16401 504 aa13.91□□□□□ -0.18
CKS2-201ENST00000314355 NT5DC1Q5TFE4 455 aa13.91□□□□□ -0.18
CKS2-201ENST00000314355 EEF1DP3Q658K8 133 aa13.91□□□□□ -0.18
CKS2-201ENST00000314355 KANK3Q6NY19 840 aa13.91□□□□□ -0.18
CKS2-201ENST00000314355 RNF168Q8IYW5 571 aaPredicted RBP13.91□□□□□ -0.18
CKS2-201ENST00000314355 HASPINQ8TF76 798 aa13.91□□□□□ -0.18
CKS2-201ENST00000314355 SPIRE2Q8WWL2 714 aa13.91□□□□□ -0.18
CKS2-201ENST00000314355 BICD1Q96G01 975 aa13.91□□□□□ -0.18
CKS2-201ENST00000314355 ACO2Q99798 780 aaKnown RBP13.91□□□□□ -0.18
CKS2-201ENST00000314355 NTPCRQ9BSD7 190 aaKnown RBP13.91□□□□□ -0.18
CKS2-201ENST00000314355 IGSF9Q9P2J2 1179 aa13.91□□□□□ -0.18
CKS2-201ENST00000314355 USP20Q9Y2K6 914 aa13.91□□□□□ -0.18
CKS2-201ENST00000314355 NUB1Q9Y5A7 615 aa13.91□□□□□ -0.18
CKS2-201ENST00000314355 TDRD15B5MCY1 1934 aaKnown RBP13.9□□□□□ -0.18
CKS2-201ENST00000314355 VPS37CA5D8V6 355 aaPredicted RBP13.9□□□□□ -0.18
CKS2-201ENST00000314355 TTLL13PA6NNM8 815 aa13.9□□□□□ -0.18
CKS2-201ENST00000314355 CLDN3O15551 220 aa13.9□□□□□ -0.18
CKS2-201ENST00000314355 TGM5O43548 720 aa13.9□□□□□ -0.18
CKS2-201ENST00000314355 SPATA31D3P0C874 917 aa13.9□□□□□ -0.18
CKS2-201ENST00000314355 MYBP10242 640 aa13.9□□□□□ -0.18
CKS2-201ENST00000314355 LONP1P36776 959 aaKnown RBP13.9□□□□□ -0.18
CKS2-201ENST00000314355 IL17AQ16552 155 aa13.9□□□□□ -0.18
CKS2-201ENST00000314355 HYIQ5T013 277 aa13.9□□□□□ -0.18
CKS2-201ENST00000314355 MPZL3Q6UWV2 235 aa13.9□□□□□ -0.18
CKS2-201ENST00000314355 PDZRN4Q6ZMN7 1036 aaPredicted RBP13.9□□□□□ -0.18
CKS2-201ENST00000314355 SPATA31D4Q6ZUB0 917 aa13.9□□□□□ -0.18
CKS2-201ENST00000314355 B3GALT6Q96L58 329 aa13.9□□□□□ -0.18
CKS2-201ENST00000314355 RUSC1Q9BVN2 902 aa13.9□□□□□ -0.18
CKS2-201ENST00000314355 TARS2Q9BW92 718 aaKnown RBP13.9□□□□□ -0.18
CKS2-201ENST00000314355 RHOBTB2Q9BYZ6 727 aa13.9□□□□□ -0.18
CKS2-201ENST00000314355 ARHGAP28Q9P2N2 729 aa13.9□□□□□ -0.18
CKS2-201ENST00000314355 CCDC39Q9UFE4 941 aa13.9□□□□□ -0.18
CKS2-201ENST00000314355 CDH22Q9UJ99 828 aa13.9□□□□□ -0.18
CKS2-201ENST00000314355 GTF3C5Q9Y5Q8 519 aaPredicted RBP13.9□□□□□ -0.18
CKS2-201ENST00000314355 SMIM28A0A1B0GU29 152 aa13.89□□□□□ -0.19
CKS2-201ENST00000314355 F8W810 466 aa13.89□□□□□ -0.19
CKS2-201ENST00000314355 PTGESO14684 152 aa13.89□□□□□ -0.19
CKS2-201ENST00000314355 XYLBO75191 536 aa13.89□□□□□ -0.19
CKS2-201ENST00000314355 TOM1L1O75674 476 aa13.89□□□□□ -0.19
CKS2-201ENST00000314355 FAM13AO94988 1023 aa13.89□□□□□ -0.19
CKS2-201ENST00000314355 KIF4AO95239 1232 aa13.89□□□□□ -0.19
CKS2-201ENST00000314355 EFEMP2O95967 443 aa13.89□□□□□ -0.19
CKS2-201ENST00000314355 HARSP12081 509 aaKnown RBP13.89□□□□□ -0.19
CKS2-201ENST00000314355 RPL17P18621 184 aaKnown RBP13.89□□□□□ -0.19
CKS2-201ENST00000314355 MARCKSP29966 332 aaPredicted RBP13.89□□□□□ -0.19
CKS2-201ENST00000314355 ELF1P32519 619 aa13.89□□□□□ -0.19
CKS2-201ENST00000314355 TXLNAP40222 546 aa13.89□□□□□ -0.19
CKS2-201ENST00000314355 PTPN5P54829 565 aa13.89□□□□□ -0.19
CKS2-201ENST00000314355 TDGQ13569 410 aa13.89□□□□□ -0.19
CKS2-201ENST00000314355 DHX8Q14562 1220 aaKnown RBP13.89□□□□□ -0.19
CKS2-201ENST00000314355 KYAT1Q16773 422 aa13.89□□□□□ -0.19
CKS2-201ENST00000314355 UVSSAQ2YD98 709 aa13.89□□□□□ -0.19
CKS2-201ENST00000314355 GLRA4Q5JXX5 417 aa13.89□□□□□ -0.19
CKS2-201ENST00000314355 PPM1LQ5SGD2 360 aa13.89□□□□□ -0.19
CKS2-201ENST00000314355 PRSS55Q6UWB4 352 aaPredicted RBP13.89□□□□□ -0.19
CKS2-201ENST00000314355 ANKS3Q6ZW76 656 aa13.89□□□□□ -0.19
CKS2-201ENST00000314355 MYCT1Q8N699 235 aa13.89□□□□□ -0.19
CKS2-201ENST00000314355 PIK3R5Q8WYR1 880 aa13.89□□□□□ -0.19
CKS2-201ENST00000314355 NXPE3Q969Y0 559 aa13.89□□□□□ -0.19
CKS2-201ENST00000314355 PAAF1Q9BRP4 392 aa13.89□□□□□ -0.19
CKS2-201ENST00000314355 MMTAG2Q9BU76 263 aaKnown RBP13.89□□□□□ -0.19
CKS2-201ENST00000314355 PRKD2Q9BZL6 878 aa13.89□□□□□ -0.19
CKS2-201ENST00000314355 ZHX3Q9H4I2 956 aa13.89□□□□□ -0.19
CKS2-201ENST00000314355 WDR6Q9NNW5 1121 aaKnown RBP13.89□□□□□ -0.19
CKS2-201ENST00000314355 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP13.89□□□□□ -0.192e-11■□□□□ 8.4
CKS2-201ENST00000314355 FBXL21Q9UKT6 434 aa13.89□□□□□ -0.19
CKS2-201ENST00000314355 ODF2LQ9ULJ1 636 aa13.89□□□□□ -0.19
CKS2-201ENST00000314355 POLIQ9UNA4 740 aa13.89□□□□□ -0.19
CKS2-201ENST00000314355 TMEM189-UBE2V1I3L0A0 370 aa13.88□□□□□ -0.19
CKS2-201ENST00000314355 STK25O00506 426 aa13.88□□□□□ -0.19
CKS2-201ENST00000314355 XPOTO43592 962 aaKnown RBP13.88□□□□□ -0.19
CKS2-201ENST00000314355 RFPL2O75678 378 aa13.88□□□□□ -0.19
CKS2-201ENST00000314355 ZMYND10O75800 440 aa13.88□□□□□ -0.19
CKS2-201ENST00000314355 ASGR2P07307 311 aa13.88□□□□□ -0.19
CKS2-201ENST00000314355 HNRNPA1P09651 372 aaKnown RBP eCLIP13.88□□□□□ -0.19
CKS2-201ENST00000314355 RFX1P22670 979 aa13.88□□□□□ -0.19
CKS2-201ENST00000314355 RPL9P32969 192 aaKnown RBP13.88□□□□□ -0.19
CKS2-201ENST00000314355 CLCNKBP51801 687 aa13.88□□□□□ -0.19
CKS2-201ENST00000314355 NUBP1P53384 320 aa13.88□□□□□ -0.19
CKS2-201ENST00000314355 SF3A1Q15459 793 aaKnown RBP13.88□□□□□ -0.19
CKS2-201ENST00000314355 RTP2Q5QGT7 225 aa13.88□□□□□ -0.19
CKS2-201ENST00000314355 ZPBP2Q6X784 338 aa13.88□□□□□ -0.19
CKS2-201ENST00000314355 RTL10Q7L3V2 364 aa13.88□□□□□ -0.19
CKS2-201ENST00000314355 LNX1Q8TBB1 728 aaPredicted RBP13.88□□□□□ -0.19
CKS2-201ENST00000314355 PNMA5Q96PV4 448 aa13.88□□□□□ -0.19
CKS2-201ENST00000314355 CDT1Q9H211 546 aa13.88□□□□□ -0.19
CKS2-201ENST00000314355 ANKFY1Q9P2R3 1169 aa13.88□□□□□ -0.19
CKS2-201ENST00000314355 ZFP37Q9Y6Q3 630 aaPredicted RBP13.88□□□□□ -0.19
CKS2-201ENST00000314355 CLUHO75153 1309 aa13.88□□□□□ -0.19
CKS2-201ENST00000314355 H7C4K7 107 aa13.87□□□□□ -0.19
CKS2-201ENST00000314355 TBCAO75347 108 aaKnown RBP13.87□□□□□ -0.19
CKS2-201ENST00000314355 CD2BP2O95400 341 aaKnown RBP13.87□□□□□ -0.19
CKS2-201ENST00000314355 AVPR2P30518 371 aa13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms