RNA–Protein interactions for RNA: ENST00000314289.12

RNF4-201, Transcript of ring finger protein 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RNF4, Length 3,088 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-201ENST00000314289 GUCY2FP51841 1108 aa13.36□□□□□ -0.27
RNF4-201ENST00000314289 FMO1Q01740 532 aa13.36□□□□□ -0.27
RNF4-201ENST00000314289 MKRN4PQ13434 485 aaPredicted RBP13.36□□□□□ -0.27
RNF4-201ENST00000314289 GPR162Q16538 588 aa13.36□□□□□ -0.27
RNF4-201ENST00000314289 RHPN2Q8IUC4 686 aa13.36□□□□□ -0.27
RNF4-201ENST00000314289 RNF149Q8NC42 400 aa13.36□□□□□ -0.27
RNF4-201ENST00000314289 SHC3Q92529 594 aa13.36□□□□□ -0.27
RNF4-201ENST00000314289 HVCN1Q96D96 273 aa13.36□□□□□ -0.27
RNF4-201ENST00000314289 GPR20Q99678 358 aa13.36□□□□□ -0.27
RNF4-201ENST00000314289 TRPC6Q9Y210 931 aa13.36□□□□□ -0.27
RNF4-201ENST00000314289 ANKRD62A6NC57 917 aa13.35□□□□□ -0.27
RNF4-201ENST00000314289 EXTL3O43909 919 aa13.35□□□□□ -0.27
RNF4-201ENST00000314289 NAMPTP43490 491 aa13.35□□□□□ -0.27
RNF4-201ENST00000314289 GPC3P51654 580 aa13.35□□□□□ -0.27
RNF4-201ENST00000314289 PPIL2Q13356 520 aa13.35□□□□□ -0.27
RNF4-201ENST00000314289 DCAF12L1Q5VU92 463 aa13.35□□□□□ -0.27
RNF4-201ENST00000314289 ZNF572Q7Z3I7 529 aaPredicted RBP13.35□□□□□ -0.27
RNF4-201ENST00000314289 DDX42Q86XP3 938 aaKnown RBP eCLIP13.35□□□□□ -0.27
RNF4-201ENST00000314289 MICALL1Q8N3F8 863 aa13.35□□□□□ -0.27
RNF4-201ENST00000314289 PSPC1Q8WXF1 523 aaKnown RBP13.35□□□□□ -0.27
RNF4-201ENST00000314289 PPM1EQ8WY54 764 aa13.35□□□□□ -0.27
RNF4-201ENST00000314289 SLC10A4Q96EP9 437 aa13.35□□□□□ -0.27
RNF4-201ENST00000314289 AMFRQ9UKV5 643 aa13.35□□□□□ -0.27
RNF4-201ENST00000314289 UMODL1Q5DID0 1318 aa13.35□□□□□ -0.27
RNF4-201ENST00000314289 MAPK13O15264 365 aa13.35□□□□□ -0.27
RNF4-201ENST00000314289 HLA-DRAP01903 254 aa13.35□□□□□ -0.27
RNF4-201ENST00000314289 CFHP08603 1231 aa13.35□□□□□ -0.27
RNF4-201ENST00000314289 FAM153BP0C7A2 387 aa13.35□□□□□ -0.27
RNF4-201ENST00000314289 GARTP22102 1010 aa13.35□□□□□ -0.27
RNF4-201ENST00000314289 PIK3CAP42336 1068 aa13.35□□□□□ -0.27
RNF4-201ENST00000314289 SNRPFP62306 86 aaKnown RBP13.35□□□□□ -0.27
RNF4-201ENST00000314289 ERVK-9P63128 1117 aa13.35□□□□□ -0.27
RNF4-201ENST00000314289 TARBP2Q15633 366 aaKnown RBP13.35□□□□□ -0.27
RNF4-201ENST00000314289 FAM153CQ494X1 144 aa13.35□□□□□ -0.27
RNF4-201ENST00000314289 PASD1Q8IV76 773 aa13.35□□□□□ -0.27
RNF4-201ENST00000314289 KRT35Q92764 455 aa13.35□□□□□ -0.27
RNF4-201ENST00000314289 NIFKQ9BYG3 293 aaKnown RBP13.35□□□□□ -0.27
RNF4-201ENST00000314289 FAM153AQ9UHL3 310 aa13.35□□□□□ -0.27
RNF4-201ENST00000314289 KCNH4Q9UQ05 1017 aa13.35□□□□□ -0.27
RNF4-201ENST00000314289 EVPLQ92817 2033 aa13.35□□□□□ -0.27
RNF4-201ENST00000314289 KRIT1O00522 736 aa13.34□□□□□ -0.27
RNF4-201ENST00000314289 FGGP02679 453 aa13.34□□□□□ -0.27
RNF4-201ENST00000314289 CLCN3P51790 818 aa13.34□□□□□ -0.27
RNF4-201ENST00000314289 RTP1P59025 263 aa13.34□□□□□ -0.27
RNF4-201ENST00000314289 DNAJC21Q5F1R6 531 aaKnown RBP13.34□□□□□ -0.27
RNF4-201ENST00000314289 FAM160B1Q5W0V3 765 aa13.34□□□□□ -0.27
RNF4-201ENST00000314289 USP50Q70EL3 339 aaPredicted RBP13.34□□□□□ -0.27
RNF4-201ENST00000314289 SLFN11Q7Z7L1 901 aa13.34□□□□□ -0.27
RNF4-201ENST00000314289 TMC2Q8TDI7 906 aa13.34□□□□□ -0.27
RNF4-201ENST00000314289 TMEM174Q8WUU8 243 aa13.34□□□□□ -0.27
RNF4-201ENST00000314289 LMBR1Q8WVP7 490 aa13.34□□□□□ -0.27
RNF4-201ENST00000314289 CPA5Q8WXQ8 436 aa13.34□□□□□ -0.27
RNF4-201ENST00000314289 ALG3Q92685 438 aa13.34□□□□□ -0.27
RNF4-201ENST00000314289 CELF4Q9BZC1 486 aaKnown RBP13.34□□□□□ -0.27
RNF4-201ENST00000314289 STXBP5LQ9Y2K9 1186 aa13.34□□□□□ -0.27
RNF4-201ENST00000314289 B4GALT5O43286 388 aa13.34□□□□□ -0.27
RNF4-201ENST00000314289 OSBPP22059 807 aa13.34□□□□□ -0.27
RNF4-201ENST00000314289 RFX1P22670 979 aa13.34□□□□□ -0.27
RNF4-201ENST00000314289 CCT5P48643 541 aa13.34□□□□□ -0.27
RNF4-201ENST00000314289 PDE6CP51160 858 aa13.34□□□□□ -0.27
RNF4-201ENST00000314289 CELF3Q5SZQ8 465 aaKnown RBP13.34□□□□□ -0.27
RNF4-201ENST00000314289 DAB2IPQ5VWQ8 1189 aa13.34□□□□□ -0.27
RNF4-201ENST00000314289 TTC19Q6DKK2 380 aaPredicted RBP13.34□□□□□ -0.27
RNF4-201ENST00000314289 ARMC9Q7Z3E5 817 aa13.34□□□□□ -0.27
RNF4-201ENST00000314289 TRIM7Q9C029 511 aa13.34□□□□□ -0.27
RNF4-201ENST00000314289 RNPEPQ9H4A4 650 aa13.34□□□□□ -0.27
RNF4-201ENST00000314289 TAF1DQ9H5J8 278 aaPredicted RBP13.34□□□□□ -0.27
RNF4-201ENST00000314289 C1orf112Q9NSG2 853 aa13.34□□□□□ -0.27
RNF4-201ENST00000314289 AMACRQ9UHK6 382 aa13.34□□□□□ -0.27
RNF4-201ENST00000314289 COQ4Q9Y3A0 265 aa13.34□□□□□ -0.27
RNF4-201ENST00000314289 ALG6Q9Y672 507 aa13.34□□□□□ -0.27
RNF4-201ENST00000314289 ZBTB42B2RXF5 422 aa13.33□□□□□ -0.27
RNF4-201ENST00000314289 CLDN3O15551 220 aa13.33□□□□□ -0.27
RNF4-201ENST00000314289 VNN1O95497 513 aa13.33□□□□□ -0.27
RNF4-201ENST00000314289 ZBTB48P10074 688 aaPredicted RBP13.33□□□□□ -0.27
RNF4-201ENST00000314289 ANXA13P27216 316 aa13.33□□□□□ -0.27
RNF4-201ENST00000314289 LAMTOR4Q0VGL1 99 aa13.33□□□□□ -0.27
RNF4-201ENST00000314289 CEP120Q8N960 986 aa13.33□□□□□ -0.27
RNF4-201ENST00000314289 INTUQ9ULD6 942 aa13.33□□□□□ -0.27
RNF4-201ENST00000314289 A0A0A6YYK5 440 aaPredicted RBP13.33□□□□□ -0.28
RNF4-201ENST00000314289 SLC25A27O95847 323 aa13.33□□□□□ -0.28
RNF4-201ENST00000314289 AARSP49588 968 aaKnown RBP eCLIP13.33□□□□□ -0.28
RNF4-201ENST00000314289 ITIH3Q06033 890 aa13.33□□□□□ -0.28
RNF4-201ENST00000314289 TMEM132AQ24JP5 1023 aa13.33□□□□□ -0.28
RNF4-201ENST00000314289 THNSL1Q8IYQ7 743 aa13.33□□□□□ -0.28
RNF4-201ENST00000314289 TSEN2Q8NCE0 465 aaKnown RBP13.33□□□□□ -0.28
RNF4-201ENST00000314289 FAM76AQ8TAV0 307 aa13.33□□□□□ -0.28
RNF4-201ENST00000314289 ZNF653Q96CK0 615 aa13.33□□□□□ -0.28
RNF4-201ENST00000314289 HES6Q96HZ4 224 aa13.33□□□□□ -0.28
RNF4-201ENST00000314289 TRIM31Q9BZY9 425 aa13.33□□□□□ -0.28
RNF4-201ENST00000314289 VIPAS39Q9H9C1 493 aa13.33□□□□□ -0.28
RNF4-201ENST00000314289 APOBEC3GQ9HC16 384 aaKnown RBP13.33□□□□□ -0.28
RNF4-201ENST00000314289 ZNFX1Q9P2E3 1918 aaKnown RBP13.33□□□□□ -0.28
RNF4-201ENST00000314289 GOLGA6CA6NDK9 693 aa13.33□□□□□ -0.28
RNF4-201ENST00000314289 INO80B-WBP1J3KQ70 363 aa13.33□□□□□ -0.28
RNF4-201ENST00000314289 PGRMC1O00264 195 aaKnown RBP13.33□□□□□ -0.28
RNF4-201ENST00000314289 ADCY3O60266 1144 aa13.33□□□□□ -0.28
RNF4-201ENST00000314289 MAFO75444 373 aaPredicted RBP13.33□□□□□ -0.28
RNF4-201ENST00000314289 GOLGA6DP0CG33 693 aa13.33□□□□□ -0.28
RNF4-201ENST00000314289 TGFB3P10600 412 aa13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms