RNA–Protein interactions for RNA: ENST00000309285.3

XCR1-201, Transcript of X-C motif chemokine receptor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene XCR1, Length 5,281 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XCR1-201ENST00000309285 DCTN3O75935 186 aa9.85□□□□□ -0.83
XCR1-201ENST00000309285 FAM107AO95990 144 aa9.85□□□□□ -0.83
XCR1-201ENST00000309285 DUX4L2P0CJ85 424 aa9.85□□□□□ -0.83
XCR1-201ENST00000309285 DUX4L3P0CJ86 424 aa9.85□□□□□ -0.83
XCR1-201ENST00000309285 DUX4L4P0CJ87 422 aa9.85□□□□□ -0.83
XCR1-201ENST00000309285 DUX4L5P0CJ88 424 aa9.85□□□□□ -0.83
XCR1-201ENST00000309285 DUX4L6P0CJ89 424 aa9.85□□□□□ -0.83
XCR1-201ENST00000309285 DUX4L7P0CJ90 424 aa9.85□□□□□ -0.83
XCR1-201ENST00000309285 ACTN1P12814 892 aa9.85□□□□□ -0.83
XCR1-201ENST00000309285 POLR2BP30876 1174 aaKnown RBP9.85□□□□□ -0.83
XCR1-201ENST00000309285 PHBP35232 272 aa9.85□□□□□ -0.83
XCR1-201ENST00000309285 PTK2Q05397 1052 aa9.85□□□□□ -0.83
XCR1-201ENST00000309285 CCNI2Q6ZMN8 369 aaPredicted RBP9.85□□□□□ -0.83
XCR1-201ENST00000309285 RYBPQ8N488 228 aaPredicted RBP9.85□□□□□ -0.83
XCR1-201ENST00000309285 HNRNPLLQ8WVV9 542 aaKnown RBP9.85□□□□□ -0.83
XCR1-201ENST00000309285 FAM49AQ9H0Q0 323 aaPredicted RBP9.85□□□□□ -0.83
XCR1-201ENST00000309285 SMYD2Q9NRG4 433 aa9.85□□□□□ -0.83
XCR1-201ENST00000309285 DUX4Q9UBX2 424 aa9.85□□□□□ -0.83
XCR1-201ENST00000309285 RNF225M0QZC1 329 aaPredicted RBP9.85□□□□□ -0.83
XCR1-201ENST00000309285 SNHG28P0DPA3 235 aa9.85□□□□□ -0.83
XCR1-201ENST00000309285 CDR2Q01850 454 aa9.85□□□□□ -0.83
XCR1-201ENST00000309285 BFSP1Q12934 665 aa9.85□□□□□ -0.83
XCR1-201ENST00000309285 FLOT2Q14254 428 aa9.85□□□□□ -0.83
XCR1-201ENST00000309285 ZC2HC1CQ53FD0 456 aaPredicted RBP9.85□□□□□ -0.83
XCR1-201ENST00000309285 TMEM139Q8IV31 216 aa9.85□□□□□ -0.83
XCR1-201ENST00000309285 SYT2Q8N9I0 419 aaPredicted RBP9.85□□□□□ -0.83
XCR1-201ENST00000309285 GMCL1P1Q8NEA9 526 aa9.85□□□□□ -0.83
XCR1-201ENST00000309285 FAM210AQ96ND0 272 aa9.85□□□□□ -0.83
XCR1-201ENST00000309285 TMEM165Q9HC07 324 aa9.85□□□□□ -0.83
XCR1-201ENST00000309285 KCND1Q9NSA2 647 aa9.85□□□□□ -0.83
XCR1-201ENST00000309285 TMX2Q9Y320 296 aa9.85□□□□□ -0.83
XCR1-201ENST00000309285 PCDHB4Q9Y5E5 795 aa9.85□□□□□ -0.83
XCR1-201ENST00000309285 LAMA4Q16363 1823 aa9.85□□□□□ -0.83
XCR1-201ENST00000309285 ARHGAP10A1A4S6 786 aa9.84□□□□□ -0.83
XCR1-201ENST00000309285 GOLGA8IPA6NC78 632 aa9.84□□□□□ -0.83
XCR1-201ENST00000309285 GOLGA8JA6NMD2 632 aa9.84□□□□□ -0.83
XCR1-201ENST00000309285 PDXKO00764 312 aa9.84□□□□□ -0.83
XCR1-201ENST00000309285 NCK2O43639 380 aa9.84□□□□□ -0.83
XCR1-201ENST00000309285 ZNF189O75820 626 aaPredicted RBP9.84□□□□□ -0.83
XCR1-201ENST00000309285 TFRCP02786 760 aaKnown RBP9.84□□□□□ -0.83
XCR1-201ENST00000309285 S100BP04271 92 aaPredicted RBP9.84□□□□□ -0.83
XCR1-201ENST00000309285 TRIM49P0CI25 452 aa9.84□□□□□ -0.83
XCR1-201ENST00000309285 TRIM49CP0CI26 452 aa9.84□□□□□ -0.83
XCR1-201ENST00000309285 GLE1Q53GS7 698 aaKnown RBP9.84□□□□□ -0.83
XCR1-201ENST00000309285 ZBTB33Q86T24 672 aa9.84□□□□□ -0.83
XCR1-201ENST00000309285 MKL1Q969V6 931 aa9.84□□□□□ -0.83
XCR1-201ENST00000309285 SDCCAG3Q96C92 435 aa9.84□□□□□ -0.83
XCR1-201ENST00000309285 L1RE1Q9UN81 338 aa9.84□□□□□ -0.83
XCR1-201ENST00000309285 MYH13Q9UKX3 1938 aa9.84□□□□□ -0.83
XCR1-201ENST00000309285 PITPNM2Q9BZ72 1349 aa9.84□□□□□ -0.83
XCR1-201ENST00000309285 TARSL2A2RTX5 802 aaKnown RBP9.84□□□□□ -0.83
XCR1-201ENST00000309285 MCF2LO15068 1137 aa9.84□□□□□ -0.83
XCR1-201ENST00000309285 ATP5HO75947 161 aa9.84□□□□□ -0.83
XCR1-201ENST00000309285 CA4P22748 312 aa9.84□□□□□ -0.83
XCR1-201ENST00000309285 ADCY2Q08462 1091 aa9.84□□□□□ -0.83
XCR1-201ENST00000309285 MTMR2Q13614 643 aa9.84□□□□□ -0.83
XCR1-201ENST00000309285 PTGISQ16647 500 aa9.84□□□□□ -0.83
XCR1-201ENST00000309285 ZKSCAN4Q969J2 545 aaPredicted RBP9.84□□□□□ -0.83
XCR1-201ENST00000309285 SCHIP1Q9P0W5 487 aaPredicted RBP9.84□□□□□ -0.83
XCR1-201ENST00000309285 NVLO15381 856 aaKnown RBP9.84□□□□□ -0.83
XCR1-201ENST00000309285 SRGAP2CP0DJJ0 459 aa9.84□□□□□ -0.83
XCR1-201ENST00000309285 ATF2P15336 505 aa9.84□□□□□ -0.83
XCR1-201ENST00000309285 SLC9A1P19634 815 aa9.84□□□□□ -0.83
XCR1-201ENST00000309285 CAP2P40123 477 aa9.84□□□□□ -0.83
XCR1-201ENST00000309285 CXCL9Q07325 125 aa9.84□□□□□ -0.83
XCR1-201ENST00000309285 SAMD7Q7Z3H4 446 aa9.84□□□□□ -0.83
XCR1-201ENST00000309285 SCFD1Q8WVM8 642 aa9.84□□□□□ -0.83
XCR1-201ENST00000309285 SCYL1Q96KG9 808 aa9.84□□□□□ -0.83
XCR1-201ENST00000309285 NT5C1BQ96P26 610 aa9.84□□□□□ -0.83
XCR1-201ENST00000309285 ACCSQ96QU6 501 aa9.84□□□□□ -0.83
XCR1-201ENST00000309285 ATP6V0A4Q9HBG4 840 aa9.84□□□□□ -0.83
XCR1-201ENST00000309285 ANO9A1A5B4 782 aa9.84□□□□□ -0.83
XCR1-201ENST00000309285 MEIS2O14770 477 aa9.84□□□□□ -0.83
XCR1-201ENST00000309285 EEF1B2P24534 225 aaKnown RBP9.84□□□□□ -0.83
XCR1-201ENST00000309285 EPHA7Q15375 998 aa9.84□□□□□ -0.83
XCR1-201ENST00000309285 EDRF1Q3B7T1 1238 aa9.84□□□□□ -0.83
XCR1-201ENST00000309285 C1orf146Q5VVC0 180 aa9.84□□□□□ -0.83
XCR1-201ENST00000309285 CCNYQ8ND76 341 aa9.84□□□□□ -0.83
XCR1-201ENST00000309285 SLC10A4Q96EP9 437 aa9.84□□□□□ -0.83
XCR1-201ENST00000309285 RUSC1Q9BVN2 902 aa9.84□□□□□ -0.83
XCR1-201ENST00000309285 EDEM3Q9BZQ6 932 aa9.84□□□□□ -0.83
XCR1-201ENST00000309285 ZFYVE1Q9HBF4 777 aa9.84□□□□□ -0.83
XCR1-201ENST00000309285 KMT5AQ9NQR1 393 aa9.84□□□□□ -0.83
XCR1-201ENST00000309285 RNF146Q9NTX7 359 aa9.84□□□□□ -0.83
XCR1-201ENST00000309285 ZFP69BQ9UJL9 534 aa9.84□□□□□ -0.83
XCR1-201ENST00000309285 H0YCG3 227 aa9.84□□□□□ -0.84
XCR1-201ENST00000309285 IGF2BP3O00425 579 aaKnown RBP eCLIP9.84□□□□□ -0.84
XCR1-201ENST00000309285 PALMO75781 387 aa9.84□□□□□ -0.84
XCR1-201ENST00000309285 P4HBP07237 508 aaKnown RBP9.84□□□□□ -0.84
XCR1-201ENST00000309285 KRT3P12035 628 aa9.84□□□□□ -0.84
XCR1-201ENST00000309285 CD58P19256 250 aa9.84□□□□□ -0.84
XCR1-201ENST00000309285 QARSP47897 775 aaKnown RBP9.84□□□□□ -0.84
XCR1-201ENST00000309285 LRRC36Q1X8D7 754 aa9.84□□□□□ -0.84
XCR1-201ENST00000309285 ANKRD20A4Q4UJ75 823 aa9.84□□□□□ -0.84
XCR1-201ENST00000309285 ANKRD20A8PQ5CZ79 823 aa9.84□□□□□ -0.84
XCR1-201ENST00000309285 ANKRD20A2Q5SQ80 823 aa9.84□□□□□ -0.84
XCR1-201ENST00000309285 TMTC4Q5T4D3 741 aa9.84□□□□□ -0.84
XCR1-201ENST00000309285 ANKRD20A1Q5TYW2 823 aa9.84□□□□□ -0.84
XCR1-201ENST00000309285 SPATA4Q8NEY3 305 aa9.84□□□□□ -0.84
XCR1-201ENST00000309285 MAIP1Q8WWC4 291 aa9.84□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms