RNA–Protein interactions for RNA: ENST00000308521.9

APOBEC3F-201, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3F, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene APOBEC3F, Length 2,694 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3F-201ENST00000308521 DDX47Q9H0S4 455 aaKnown RBP11.08□□□□□ -0.64
APOBEC3F-201ENST00000308521 GABBR1Q9UBS5 961 aa11.08□□□□□ -0.64
APOBEC3F-201ENST00000308521 UTP11Q9Y3A2 253 aaKnown RBP11.08□□□□□ -0.64
APOBEC3F-201ENST00000308521 CEP350Q5VT06 3117 aa11.07□□□□□ -0.64
APOBEC3F-201ENST00000308521 WDR64B1ANS9 1081 aa11.07□□□□□ -0.64
APOBEC3F-201ENST00000308521 BACH1O14867 736 aa11.07□□□□□ -0.64
APOBEC3F-201ENST00000308521 HIP1RO75146 1068 aa11.07□□□□□ -0.64
APOBEC3F-201ENST00000308521 H2AFZP0C0S5 128 aa11.07□□□□□ -0.64
APOBEC3F-201ENST00000308521 IMPDH2P12268 514 aa11.07□□□□□ -0.64
APOBEC3F-201ENST00000308521 UCHL3P15374 230 aa11.07□□□□□ -0.64
APOBEC3F-201ENST00000308521 ODR4Q5SWX8 454 aa11.07□□□□□ -0.64
APOBEC3F-201ENST00000308521 TMEM63BQ5T3F8 832 aa11.07□□□□□ -0.64
APOBEC3F-201ENST00000308521 CAPRIN2Q6IMN6 1127 aaKnown RBP11.07□□□□□ -0.64
APOBEC3F-201ENST00000308521 H2AFVQ71UI9 128 aa11.07□□□□□ -0.64
APOBEC3F-201ENST00000308521 GPRASP2Q96D09 838 aa11.07□□□□□ -0.64
APOBEC3F-201ENST00000308521 HES6Q96HZ4 224 aa11.07□□□□□ -0.64
APOBEC3F-201ENST00000308521 ANKRD27Q96NW4 1050 aa11.07□□□□□ -0.64
APOBEC3F-201ENST00000308521 SPAG5Q96R06 1193 aa11.07□□□□□ -0.64
APOBEC3F-201ENST00000308521 GBA2Q9HCG7 927 aaPredicted RBP11.07□□□□□ -0.64
APOBEC3F-201ENST00000308521 TRAF3IP3Q9Y228 551 aa11.07□□□□□ -0.64
APOBEC3F-201ENST00000308521 PAPPA2Q9BXP8 1791 aa11.07□□□□□ -0.64
APOBEC3F-201ENST00000308521 CCL15-CCL14A0A0B4J2E2 113 aa11.07□□□□□ -0.64
APOBEC3F-201ENST00000308521 MGRN1O60291 552 aa11.07□□□□□ -0.64
APOBEC3F-201ENST00000308521 AFPP02771 609 aaKnown RBP11.07□□□□□ -0.64
APOBEC3F-201ENST00000308521 OSBPP22059 807 aa11.07□□□□□ -0.64
APOBEC3F-201ENST00000308521 RARRES1P49788 294 aa11.07□□□□□ -0.64
APOBEC3F-201ENST00000308521 DHX9Q08211 1270 aaKnown RBP11.07□□□□□ -0.64
APOBEC3F-201ENST00000308521 CCL15Q16663 113 aa11.07□□□□□ -0.64
APOBEC3F-201ENST00000308521 TBC1D25Q3MII6 688 aa11.07□□□□□ -0.64
APOBEC3F-201ENST00000308521 KRT71Q3SY84 523 aa11.07□□□□□ -0.64
APOBEC3F-201ENST00000308521 CPLX4Q7Z7G2 160 aa11.07□□□□□ -0.64
APOBEC3F-201ENST00000308521 NT5DC3Q86UY8 548 aa11.07□□□□□ -0.64
APOBEC3F-201ENST00000308521 VPS36Q86VN1 386 aa11.07□□□□□ -0.64
APOBEC3F-201ENST00000308521 HOOK3Q86VS8 718 aa11.07□□□□□ -0.64
APOBEC3F-201ENST00000308521 FAM228AQ86W67 206 aa11.07□□□□□ -0.64
APOBEC3F-201ENST00000308521 DAW1Q8N136 415 aa11.07□□□□□ -0.64
APOBEC3F-201ENST00000308521 CHMP6Q96FZ7 201 aa11.07□□□□□ -0.64
APOBEC3F-201ENST00000308521 XPO6Q96QU8 1125 aaKnown RBP11.07□□□□□ -0.64
APOBEC3F-201ENST00000308521 FAM129AQ9BZQ8 928 aa11.07□□□□□ -0.64
APOBEC3F-201ENST00000308521 RAB17Q9H0T7 212 aa11.07□□□□□ -0.64
APOBEC3F-201ENST00000308521 PARVGQ9HBI0 331 aa11.07□□□□□ -0.64
APOBEC3F-201ENST00000308521 HAUS2Q9NVX0 235 aa11.07□□□□□ -0.64
APOBEC3F-201ENST00000308521 AMACRQ9UHK6 382 aa11.07□□□□□ -0.64
APOBEC3F-201ENST00000308521 TPX2Q9ULW0 747 aaKnown RBP11.07□□□□□ -0.64
APOBEC3F-201ENST00000308521 PCDHA10Q9Y5I2 948 aa11.07□□□□□ -0.64
APOBEC3F-201ENST00000308521 EME2A4GXA9 379 aaPredicted RBP11.06□□□□□ -0.64
APOBEC3F-201ENST00000308521 BTBD19C9JJ37 291 aa11.06□□□□□ -0.64
APOBEC3F-201ENST00000308521 PDHXO00330 501 aa11.06□□□□□ -0.64
APOBEC3F-201ENST00000308521 ZNF862O60290 1169 aa11.06□□□□□ -0.64
APOBEC3F-201ENST00000308521 GSTA1P08263 222 aa11.06□□□□□ -0.64
APOBEC3F-201ENST00000308521 NUDT17P0C025 328 aa11.06□□□□□ -0.64
APOBEC3F-201ENST00000308521 PON1P27169 355 aa11.06□□□□□ -0.64
APOBEC3F-201ENST00000308521 JAM2P57087 298 aa11.06□□□□□ -0.64
APOBEC3F-201ENST00000308521 RIPK1Q13546 671 aa11.06□□□□□ -0.64
APOBEC3F-201ENST00000308521 ENOX2Q16206 610 aaKnown RBP11.06□□□□□ -0.64
APOBEC3F-201ENST00000308521 LY6KQ17RY6 165 aa11.06□□□□□ -0.64
APOBEC3F-201ENST00000308521 SPRED3Q2MJR0 410 aa11.06□□□□□ -0.64
APOBEC3F-201ENST00000308521 XKR9Q5GH70 373 aa11.06□□□□□ -0.64
APOBEC3F-201ENST00000308521 ANO5Q75V66 913 aa11.06□□□□□ -0.64
APOBEC3F-201ENST00000308521 CCDC60Q8IWA6 550 aaPredicted RBP11.06□□□□□ -0.64
APOBEC3F-201ENST00000308521 RBM12BQ8IXT5 1001 aaKnown RBP11.06□□□□□ -0.64
APOBEC3F-201ENST00000308521 ZFAND2BQ8WV99 257 aa11.06□□□□□ -0.64
APOBEC3F-201ENST00000308521 HVCN1Q96D96 273 aa11.06□□□□□ -0.64
APOBEC3F-201ENST00000308521 MS4A4AQ96JQ5 239 aa11.06□□□□□ -0.64
APOBEC3F-201ENST00000308521 JPH1Q9HDC5 661 aaPredicted RBP11.06□□□□□ -0.64
APOBEC3F-201ENST00000308521 SLC9A2Q9UBY0 812 aa11.06□□□□□ -0.64
APOBEC3F-201ENST00000308521 SCN4AP35499 1836 aa11.06□□□□□ -0.64
APOBEC3F-201ENST00000308521 RBBP6Q7Z6E9 1792 aaKnown RBP11.06□□□□□ -0.64
APOBEC3F-201ENST00000308521 CCT8L1PA6NM43 557 aa11.06□□□□□ -0.64
APOBEC3F-201ENST00000308521 SPATA31C2B4DYI2 1134 aa11.06□□□□□ -0.64
APOBEC3F-201ENST00000308521 ASAP2O43150 1006 aa11.06□□□□□ -0.64
APOBEC3F-201ENST00000308521 TTI1O43156 1089 aa11.06□□□□□ -0.64
APOBEC3F-201ENST00000308521 ACTN1P12814 892 aa11.06□□□□□ -0.64
APOBEC3F-201ENST00000308521 ITGA4P13612 1032 aa11.06□□□□□ -0.64
APOBEC3F-201ENST00000308521 FERP16591 822 aa11.06□□□□□ -0.64
APOBEC3F-201ENST00000308521 SLC9A1P19634 815 aa11.06□□□□□ -0.64
APOBEC3F-201ENST00000308521 NR2F2P24468 414 aa11.06□□□□□ -0.64
APOBEC3F-201ENST00000308521 ACTR2P61160 394 aa11.06□□□□□ -0.64
APOBEC3F-201ENST00000308521 KRT76Q01546 638 aa11.06□□□□□ -0.64
APOBEC3F-201ENST00000308521 CLUL1Q15846 466 aa11.06□□□□□ -0.64
APOBEC3F-201ENST00000308521 EXOC3L4Q17RC7 722 aa11.06□□□□□ -0.64
APOBEC3F-201ENST00000308521 KNOP1Q1ED39 458 aaKnown RBP11.06□□□□□ -0.64
APOBEC3F-201ENST00000308521 CST9Q5W186 159 aa11.06□□□□□ -0.64
APOBEC3F-201ENST00000308521 FAM178BQ8IXR5 827 aa11.06□□□□□ -0.64
APOBEC3F-201ENST00000308521 CCDC197Q8NCU1 140 aa11.06□□□□□ -0.64
APOBEC3F-201ENST00000308521 BRI3BPQ8WY22 251 aa11.06□□□□□ -0.64
APOBEC3F-201ENST00000308521 ARMCX3Q9UH62 379 aaPredicted RBP11.06□□□□□ -0.64
APOBEC3F-201ENST00000308521 AMFRQ9UKV5 643 aa11.06□□□□□ -0.64
APOBEC3F-201ENST00000308521 PDLIM1O00151 329 aa11.05□□□□□ -0.64
APOBEC3F-201ENST00000308521 AP1G2O75843 785 aa11.05□□□□□ -0.64
APOBEC3F-201ENST00000308521 GCLCP48506 637 aaPredicted RBP11.05□□□□□ -0.64
APOBEC3F-201ENST00000308521 PSMC5P62195 406 aa11.05□□□□□ -0.64
APOBEC3F-201ENST00000308521 ROR2Q01974 943 aaKnown RBP11.05□□□□□ -0.64
APOBEC3F-201ENST00000308521 ITIH4Q14624 930 aa11.05□□□□□ -0.64
APOBEC3F-201ENST00000308521 GNPTABQ3T906 1256 aa11.05□□□□□ -0.64
APOBEC3F-201ENST00000308521 MIS18BP1Q6P0N0 1132 aa11.05□□□□□ -0.64
APOBEC3F-201ENST00000308521 CROCCP2Q86T23 111 aa11.05□□□□□ -0.64
APOBEC3F-201ENST00000308521 PARD3BQ8TEW8 1205 aa11.05□□□□□ -0.64
APOBEC3F-201ENST00000308521 ATP8B4Q8TF62 1192 aa11.05□□□□□ -0.64
APOBEC3F-201ENST00000308521 PGM2Q96G03 612 aa11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 56.3 ms