RNA–Protein interactions for RNA: ENST00000308354.11

PDLIM2-202, Transcript of PDZ and LIM domain 2, humanhuman

TSL 1 (best) BASIC

Gene PDLIM2, Length 2,236 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-202ENST00000308354 IQSEC1Q6DN90 963 aa24.22■■□□□ 1.47
PDLIM2-202ENST00000308354 C17orf99Q6UX52 265 aa24.22■■□□□ 1.47
PDLIM2-202ENST00000308354 C15orf39Q6ZRI6 1047 aa24.22■■□□□ 1.47
PDLIM2-202ENST00000308354 DHX38Q92620 1227 aaKnown RBP24.22■■□□□ 1.47
PDLIM2-202ENST00000308354 NT5C1BQ96P26 610 aa24.22■■□□□ 1.47
PDLIM2-202ENST00000308354 ZIC5Q96T25 663 aa24.22■■□□□ 1.47
PDLIM2-202ENST00000308354 DAAM1Q9Y4D1 1078 aa24.22■■□□□ 1.47
PDLIM2-202ENST00000308354 ATP8B1O43520 1251 aa24.22■■□□□ 1.47
PDLIM2-202ENST00000308354 VTNP04004 478 aa24.22■■□□□ 1.47
PDLIM2-202ENST00000308354 SLC10A3P09131 477 aa24.22■■□□□ 1.47
PDLIM2-202ENST00000308354 CCDC172P0C7W6 258 aa24.22■■□□□ 1.47
PDLIM2-202ENST00000308354 CLDN10P78369 228 aa24.22■■□□□ 1.47
PDLIM2-202ENST00000308354 C2orf54Q08AI8 447 aa24.22■■□□□ 1.47
PDLIM2-202ENST00000308354 TFDP1Q14186 410 aa24.22■■□□□ 1.47
PDLIM2-202ENST00000308354 SCARA3Q6AZY7 606 aa24.22■■□□□ 1.47
PDLIM2-202ENST00000308354 HNRNPLLQ8WVV9 542 aaKnown RBP24.22■■□□□ 1.47
PDLIM2-202ENST00000308354 FUT8Q9BYC5 575 aa24.22■■□□□ 1.47
PDLIM2-202ENST00000308354 ST7Q9NRC1 585 aa24.22■■□□□ 1.47
PDLIM2-202ENST00000308354 AKT3Q9Y243 479 aa24.22■■□□□ 1.47
PDLIM2-202ENST00000308354 CYP26A1O43174 497 aa24.21■■□□□ 1.47
PDLIM2-202ENST00000308354 SGPL1O95470 568 aa24.21■■□□□ 1.47
PDLIM2-202ENST00000308354 TCP1P17987 556 aaKnown RBP24.21■■□□□ 1.47
PDLIM2-202ENST00000308354 MFAP3P55082 362 aa24.21■■□□□ 1.47
PDLIM2-202ENST00000308354 TMEM132AQ24JP5 1023 aa24.21■■□□□ 1.47
PDLIM2-202ENST00000308354 BEND6Q5SZJ8 279 aaPredicted RBP24.21■■□□□ 1.47
PDLIM2-202ENST00000308354 C10orf76Q5T2E6 689 aa24.21■■□□□ 1.47
PDLIM2-202ENST00000308354 FAM212AQ96EL1 285 aa24.21■■□□□ 1.47
PDLIM2-202ENST00000308354 C2orf40Q9H1Z8 148 aa24.21■■□□□ 1.47
PDLIM2-202ENST00000308354 ABCB6Q9NP58 842 aa24.21■■□□□ 1.47
PDLIM2-202ENST00000308354 TAS2R14Q9NYV8 317 aa24.21■■□□□ 1.47
PDLIM2-202ENST00000308354 PCDHGC5Q9Y5F6 944 aa24.21■■□□□ 1.47
PDLIM2-202ENST00000308354 CNTNAP2Q9UHC6 1331 aa24.21■■□□□ 1.47
PDLIM2-202ENST00000308354 FAM189A1O60320 539 aa24.2■■□□□ 1.47
PDLIM2-202ENST00000308354 FTCDO95954 541 aa24.2■■□□□ 1.47
PDLIM2-202ENST00000308354 C4BPAP04003 597 aaKnown RBP24.2■■□□□ 1.47
PDLIM2-202ENST00000308354 TNFAIP3P21580 790 aa24.2■■□□□ 1.47
PDLIM2-202ENST00000308354 PTENP60484 403 aa24.2■■□□□ 1.47
PDLIM2-202ENST00000308354 OSTNP61366 133 aa24.2■■□□□ 1.47
PDLIM2-202ENST00000308354 ZACNQ401N2 412 aa24.2■■□□□ 1.47
PDLIM2-202ENST00000308354 OR5B17Q8NGF7 314 aa24.2■■□□□ 1.47
PDLIM2-202ENST00000308354 IFT122Q9HBG6 1241 aa24.2■■□□□ 1.47
PDLIM2-202ENST00000308354 SMARCAL1Q9NZC9 954 aa24.2■■□□□ 1.47
PDLIM2-202ENST00000308354 A0A087WZ62 844 aa24.2■■□□□ 1.46
PDLIM2-202ENST00000308354 ANXA13P27216 316 aa24.2■■□□□ 1.46
PDLIM2-202ENST00000308354 MBTD1Q05BQ5 628 aa24.2■■□□□ 1.46
PDLIM2-202ENST00000308354 DGKDQ16760 1214 aa24.2■■□□□ 1.46
PDLIM2-202ENST00000308354 TAF3Q5VWG9 929 aa24.2■■□□□ 1.46
PDLIM2-202ENST00000308354 SPOPLQ6IQ16 392 aa24.2■■□□□ 1.46
PDLIM2-202ENST00000308354 SLC47A2Q86VL8 602 aa24.2■■□□□ 1.46
PDLIM2-202ENST00000308354 AGPAT1Q99943 283 aa24.2■■□□□ 1.46
PDLIM2-202ENST00000308354 FDXACB1Q9BRP7 624 aaPredicted RBP24.2■■□□□ 1.46
PDLIM2-202ENST00000308354 FZD8Q9H461 694 aa24.2■■□□□ 1.46
PDLIM2-202ENST00000308354 EHD2Q9NZN4 543 aa24.2■■□□□ 1.46
PDLIM2-202ENST00000308354 ABLIM1O14639 778 aa24.19■■□□□ 1.46
PDLIM2-202ENST00000308354 VNN1O95497 513 aa24.19■■□□□ 1.46
PDLIM2-202ENST00000308354 HLA-DRAP01903 254 aa24.19■■□□□ 1.46
PDLIM2-202ENST00000308354 H2AFZP0C0S5 128 aa24.19■■□□□ 1.46
PDLIM2-202ENST00000308354 H2AFVQ71UI9 128 aa24.19■■□□□ 1.46
PDLIM2-202ENST00000308354 THNSL1Q8IYQ7 743 aa24.19■■□□□ 1.46
PDLIM2-202ENST00000308354 FAM71AQ8IYT1 594 aa24.19■■□□□ 1.46
PDLIM2-202ENST00000308354 GOLPH3Q9H4A6 298 aa24.19■■□□□ 1.46
PDLIM2-202ENST00000308354 PASKQ96RG2 1323 aa24.19■■□□□ 1.46
PDLIM2-202ENST00000308354 FAM155AB1AL88 458 aaPredicted RBP24.19■■□□□ 1.46
PDLIM2-202ENST00000308354 ACKR2O00590 384 aa24.19■■□□□ 1.46
PDLIM2-202ENST00000308354 ERLIN1O75477 346 aa24.19■■□□□ 1.46
PDLIM2-202ENST00000308354 ABCB4P21439 1286 aa24.19■■□□□ 1.46
PDLIM2-202ENST00000308354 PIK3CAP42336 1068 aa24.19■■□□□ 1.46
PDLIM2-202ENST00000308354 NOP2P46087 812 aaKnown RBP24.19■■□□□ 1.46
PDLIM2-202ENST00000308354 DNA2P51530 1060 aa24.19■■□□□ 1.46
PDLIM2-202ENST00000308354 GALCP54803 685 aa24.19■■□□□ 1.46
PDLIM2-202ENST00000308354 PPFIA1Q13136 1202 aa24.19■■□□□ 1.46
PDLIM2-202ENST00000308354 CRHR2Q13324 411 aa24.19■■□□□ 1.46
PDLIM2-202ENST00000308354 ATF7IP2Q5U623 682 aa24.19■■□□□ 1.46
PDLIM2-202ENST00000308354 EEF1DP3Q658K8 133 aa24.19■■□□□ 1.46
PDLIM2-202ENST00000308354 OLFML2BQ68BL8 750 aa24.19■■□□□ 1.46
PDLIM2-202ENST00000308354 WDR93Q6P2C0 686 aa24.19■■□□□ 1.46
PDLIM2-202ENST00000308354 MTHFD1LQ6UB35 978 aa24.19■■□□□ 1.46
PDLIM2-202ENST00000308354 CEP120Q8N960 986 aa24.19■■□□□ 1.46
PDLIM2-202ENST00000308354 SHC3Q92529 594 aa24.19■■□□□ 1.46
PDLIM2-202ENST00000308354 ABT1Q9ULW3 272 aaKnown RBP24.19■■□□□ 1.46
PDLIM2-202ENST00000308354 GRID2IPA4D2P6 1211 aa24.18■■□□□ 1.46
PDLIM2-202ENST00000308354 CLSTN1O94985 981 aa24.18■■□□□ 1.46
PDLIM2-202ENST00000308354 CALCAP01258 141 aa24.18■■□□□ 1.46
PDLIM2-202ENST00000308354 ENPEPQ07075 957 aa24.18■■□□□ 1.46
PDLIM2-202ENST00000308354 GRIK4Q16099 956 aa24.18■■□□□ 1.46
PDLIM2-202ENST00000308354 NOP9Q86U38 636 aaKnown RBP24.18■■□□□ 1.46
PDLIM2-202ENST00000308354 FMNL3Q8IVF7 1028 aa24.18■■□□□ 1.46
PDLIM2-202ENST00000308354 PACSIN2Q9UNF0 486 aaPredicted RBP24.18■■□□□ 1.46
PDLIM2-202ENST00000308354 BTNL10A8MVZ5 291 aa24.18■■□□□ 1.46
PDLIM2-202ENST00000308354 ASAP2O43150 1006 aa24.18■■□□□ 1.46
PDLIM2-202ENST00000308354 PTPROQ16827 1216 aa24.18■■□□□ 1.46
PDLIM2-202ENST00000308354 MARCH8Q5T0T0 291 aa24.18■■□□□ 1.46
PDLIM2-202ENST00000308354 RPUSD2Q8IZ73 545 aaKnown RBP24.18■■□□□ 1.46
PDLIM2-202ENST00000308354 LINC01465Q8N7H1 131 aa24.18■■□□□ 1.46
PDLIM2-202ENST00000308354 CGRRF1Q99675 332 aa24.18■■□□□ 1.46
PDLIM2-202ENST00000308354 SETD4Q9NVD3 440 aa24.18■■□□□ 1.46
PDLIM2-202ENST00000308354 MAGEB2O15479 319 aa24.17■■□□□ 1.46
PDLIM2-202ENST00000308354 TUBBP07437 444 aa24.17■■□□□ 1.46
PDLIM2-202ENST00000308354 ZNF865P0CJ78 1059 aaPredicted RBP24.17■■□□□ 1.46
PDLIM2-202ENST00000308354 MCL1Q07820 350 aa24.17■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms