RNA–Protein interactions for RNA: ENST00000308077.9

PTCD2-201, Transcript of pentatricopeptide repeat domain 2, humanhuman

TSL 1 (best)

Gene PTCD2, Length 2,195 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD2-201ENST00000308077 UCHL3P15374 230 aa7.55□□□□□ -1.2
PTCD2-201ENST00000308077 ARF4P18085 180 aaPredicted RBP7.55□□□□□ -1.2
PTCD2-201ENST00000308077 HNRNPH3P31942 346 aaKnown RBP7.55□□□□□ -1.2
PTCD2-201ENST00000308077 GRK4P32298 578 aa7.55□□□□□ -1.2
PTCD2-201ENST00000308077 MXI1P50539 228 aa7.55□□□□□ -1.2
PTCD2-201ENST00000308077 CLDN10P78369 228 aa7.55□□□□□ -1.2
PTCD2-201ENST00000308077 ENPEPQ07075 957 aa7.55□□□□□ -1.2
PTCD2-201ENST00000308077 ZNF568Q3ZCX4 644 aa7.55□□□□□ -1.2
PTCD2-201ENST00000308077 LHX8Q68G74 356 aa7.55□□□□□ -1.2
PTCD2-201ENST00000308077 GDF6Q6KF10 455 aaPredicted RBP7.55□□□□□ -1.2
PTCD2-201ENST00000308077 SRGAP1Q7Z6B7 1085 aa7.55□□□□□ -1.2
PTCD2-201ENST00000308077 CCAR2Q8N163 923 aaKnown RBP7.55□□□□□ -1.2
PTCD2-201ENST00000308077 CEP120Q8N960 986 aa7.55□□□□□ -1.2
PTCD2-201ENST00000308077 SLAIN1Q8ND83 568 aa7.55□□□□□ -1.2
PTCD2-201ENST00000308077 ATXN2LQ8WWM7 1075 aaKnown RBP7.55□□□□□ -1.2
PTCD2-201ENST00000308077 ZNF516Q92618 1163 aa7.55□□□□□ -1.2
PTCD2-201ENST00000308077 WNT8BQ93098 351 aa7.55□□□□□ -1.2
PTCD2-201ENST00000308077 PRIMPOLQ96LW4 560 aa7.55□□□□□ -1.2
PTCD2-201ENST00000308077 SCLT1Q96NL6 688 aa7.55□□□□□ -1.2
PTCD2-201ENST00000308077 OSMRQ99650 979 aa7.55□□□□□ -1.2
PTCD2-201ENST00000308077 TMEM106CQ9BVX2 250 aa7.55□□□□□ -1.2
PTCD2-201ENST00000308077 CDT1Q9H211 546 aa7.55□□□□□ -1.2
PTCD2-201ENST00000308077 PDZD7Q9H5P4 517 aa7.55□□□□□ -1.2
PTCD2-201ENST00000308077 PDE11AQ9HCR9 933 aa7.55□□□□□ -1.2
PTCD2-201ENST00000308077 KCND1Q9NSA2 647 aa7.55□□□□□ -1.2
PTCD2-201ENST00000308077 RBAKQ9NYW8 714 aaPredicted RBP7.55□□□□□ -1.2
PTCD2-201ENST00000308077 PLAGL2Q9UPG8 496 aa7.55□□□□□ -1.2
PTCD2-201ENST00000308077 TRIM17Q9Y577 477 aa7.55□□□□□ -1.2
PTCD2-201ENST00000308077 EPG5Q9HCE0 2579 aa7.55□□□□□ -1.2
PTCD2-201ENST00000308077 OGTO15294 1046 aa7.54□□□□□ -1.2
PTCD2-201ENST00000308077 P4HA2O15460 535 aa7.54□□□□□ -1.2
PTCD2-201ENST00000308077 N4BP1O75113 896 aaKnown RBP7.54□□□□□ -1.2
PTCD2-201ENST00000308077 PLEKP08567 350 aaPredicted RBP7.54□□□□□ -1.2
PTCD2-201ENST00000308077 PRMT2P55345 433 aa7.54□□□□□ -1.2
PTCD2-201ENST00000308077 KRT39Q6A163 491 aa7.54□□□□□ -1.2
PTCD2-201ENST00000308077 IQCEQ6IPM2 695 aa7.54□□□□□ -1.2
PTCD2-201ENST00000308077 CYP26C1Q6V0L0 522 aa7.54□□□□□ -1.2
PTCD2-201ENST00000308077 C15orf39Q6ZRI6 1047 aa7.54□□□□□ -1.2
PTCD2-201ENST00000308077 CACNA2D4Q7Z3S7 1137 aa7.54□□□□□ -1.2
PTCD2-201ENST00000308077 TMTC1Q8IUR5 882 aa7.54□□□□□ -1.2
PTCD2-201ENST00000308077 BRSK2Q8IWQ3 736 aa7.54□□□□□ -1.2
PTCD2-201ENST00000308077 TMEM192Q8IY95 271 aa7.54□□□□□ -1.2
PTCD2-201ENST00000308077 EHBP1Q8NDI1 1231 aa7.54□□□□□ -1.2
PTCD2-201ENST00000308077 ZNF397Q8NF99 534 aaPredicted RBP7.54□□□□□ -1.2
PTCD2-201ENST00000308077 TMEM40Q8WWA1 233 aa7.54□□□□□ -1.2
PTCD2-201ENST00000308077 DPF3Q92784 378 aa7.54□□□□□ -1.2
PTCD2-201ENST00000308077 SEMA4DQ92854 862 aa7.54□□□□□ -1.2
PTCD2-201ENST00000308077 DESI2Q9BSY9 194 aa7.54□□□□□ -1.2
PTCD2-201ENST00000308077 TCHPQ9BT92 498 aa7.54□□□□□ -1.2
PTCD2-201ENST00000308077 TMEM8AQ9HCN3 771 aa7.54□□□□□ -1.2
PTCD2-201ENST00000308077 TRMT1Q9NXH9 659 aaKnown RBP7.54□□□□□ -1.2
PTCD2-201ENST00000308077 FBXL5Q9UKA1 691 aa7.54□□□□□ -1.2
PTCD2-201ENST00000308077 CPSF3Q9UKF6 684 aaKnown RBP7.54□□□□□ -1.2
PTCD2-201ENST00000308077 GINS2Q9Y248 185 aa7.54□□□□□ -1.2
PTCD2-201ENST00000308077 MEFVO15553 781 aaPredicted RBP7.54□□□□□ -1.2
PTCD2-201ENST00000308077 GNAT1P11488 350 aa7.54□□□□□ -1.2
PTCD2-201ENST00000308077 DARSP14868 501 aaKnown RBP7.54□□□□□ -1.2
PTCD2-201ENST00000308077 HOXA11P31270 313 aaPredicted RBP7.54□□□□□ -1.2
PTCD2-201ENST00000308077 GTF2H1P32780 548 aa7.54□□□□□ -1.2
PTCD2-201ENST00000308077 JAM2P57087 298 aa7.54□□□□□ -1.2
PTCD2-201ENST00000308077 ARHGEF6Q15052 776 aa7.54□□□□□ -1.2
PTCD2-201ENST00000308077 HGSNATQ68CP4 663 aa7.54□□□□□ -1.2
PTCD2-201ENST00000308077 SCARA3Q6AZY7 606 aa7.54□□□□□ -1.2
PTCD2-201ENST00000308077 PHLDB3Q6NSJ2 640 aa7.54□□□□□ -1.2
PTCD2-201ENST00000308077 SV2AQ7L0J3 742 aa7.54□□□□□ -1.2
PTCD2-201ENST00000308077 ARHGEF19Q8IW93 802 aa7.54□□□□□ -1.2
PTCD2-201ENST00000308077 THNSL1Q8IYQ7 743 aa7.54□□□□□ -1.2
PTCD2-201ENST00000308077 TAS1R2Q8TE23 839 aa7.54□□□□□ -1.2
PTCD2-201ENST00000308077 SH3TC2Q8TF17 1288 aa7.54□□□□□ -1.2
PTCD2-201ENST00000308077 CGRRF1Q99675 332 aa7.54□□□□□ -1.2
PTCD2-201ENST00000308077 HTATIP2Q9BUP3 242 aa7.54□□□□□ -1.2
PTCD2-201ENST00000308077 GCOM2Q9BZD3 368 aaPredicted RBP7.54□□□□□ -1.2
PTCD2-201ENST00000308077 GPR88Q9GZN0 384 aa7.54□□□□□ -1.2
PTCD2-201ENST00000308077 HMX1Q9NP08 348 aaPredicted RBP7.54□□□□□ -1.2
PTCD2-201ENST00000308077 ARHGAP20Q9P2F6 1191 aa7.54□□□□□ -1.2
PTCD2-201ENST00000308077 COQ4Q9Y3A0 265 aa7.54□□□□□ -1.2
PTCD2-201ENST00000308077 RALGAPA2Q2PPJ7 1873 aa7.53□□□□□ -1.2
PTCD2-201ENST00000308077 A0A0U1RQJ8 604 aa7.53□□□□□ -1.2
PTCD2-201ENST00000308077 C4BPAP04003 597 aaKnown RBP7.53□□□□□ -1.2
PTCD2-201ENST00000308077 PNMA6AP0CW24 399 aaPredicted RBP7.53□□□□□ -1.2
PTCD2-201ENST00000308077 OSTNP61366 133 aa7.53□□□□□ -1.2
PTCD2-201ENST00000308077 CDK17Q00537 523 aa7.53□□□□□ -1.2
PTCD2-201ENST00000308077 CDC42EP1Q00587 391 aa7.53□□□□□ -1.2
PTCD2-201ENST00000308077 RAPGEF1Q13905 1077 aa7.53□□□□□ -1.2
PTCD2-201ENST00000308077 SNX17Q15036 470 aa7.53□□□□□ -1.2
PTCD2-201ENST00000308077 ENOX2Q16206 610 aaKnown RBP7.53□□□□□ -1.2
PTCD2-201ENST00000308077 TMEM132AQ24JP5 1023 aa7.53□□□□□ -1.2
PTCD2-201ENST00000308077 FAM47CQ5HY64 1035 aa7.53□□□□□ -1.2
PTCD2-201ENST00000308077 SFMBT2Q5VUG0 894 aa7.53□□□□□ -1.2
PTCD2-201ENST00000308077 TDRD10Q5VZ19 366 aaKnown RBP7.53□□□□□ -1.2
PTCD2-201ENST00000308077 RNF180Q86T96 592 aa7.53□□□□□ -1.2
PTCD2-201ENST00000308077 SESTD1Q86VW0 696 aa7.53□□□□□ -1.2
PTCD2-201ENST00000308077 REXO1L1PQ8IX06 675 aa7.53□□□□□ -1.2
PTCD2-201ENST00000308077 PCSK9Q8NBP7 692 aaKnown RBP7.53□□□□□ -1.2
PTCD2-201ENST00000308077 ACRBPQ8NEB7 543 aa7.53□□□□□ -1.2
PTCD2-201ENST00000308077 OR5B17Q8NGF7 314 aa7.53□□□□□ -1.2
PTCD2-201ENST00000308077 ATRIPQ8WXE1 791 aa7.53□□□□□ -1.2
PTCD2-201ENST00000308077 ELMO3Q96BJ8 720 aa7.53□□□□□ -1.2
PTCD2-201ENST00000308077 PPP1R13BQ96KQ4 1090 aa7.53□□□□□ -1.2
PTCD2-201ENST00000308077 FNBP1Q96RU3 617 aa7.53□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms