RNA–Protein interactions for RNA: ENST00000303450.4

HOXC9-201, Transcript of homeobox C9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC9, Length 1,516 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC9-201ENST00000303450 MYBPC2Q14324 1141 aa26.63■■□□□ 1.85
HOXC9-201ENST00000303450 NFIL3Q16649 462 aa26.63■■□□□ 1.85
HOXC9-201ENST00000303450 DPCR1Q3MIW9 517 aa26.63■■□□□ 1.85
HOXC9-201ENST00000303450 ANKRD40Q6AI12 368 aa26.63■■□□□ 1.85
HOXC9-201ENST00000303450 ALKAL1Q6UXT8 129 aa26.63■■□□□ 1.85
HOXC9-201ENST00000303450 RDH13Q8NBN7 331 aa26.63■■□□□ 1.85
HOXC9-201ENST00000303450 GSTCDQ8NEC7 633 aa26.63■■□□□ 1.85
HOXC9-201ENST00000303450 TMEM174Q8WUU8 243 aa26.63■■□□□ 1.85
HOXC9-201ENST00000303450 DMAC2Q9NW81 257 aa26.63■■□□□ 1.85
HOXC9-201ENST00000303450 MIOSQ9NXC5 875 aa26.63■■□□□ 1.85
HOXC9-201ENST00000303450 BICDL2A1A5D9 508 aa26.62■■□□□ 1.85
HOXC9-201ENST00000303450 TRIM49BA6NDI0 452 aa26.62■■□□□ 1.85
HOXC9-201ENST00000303450 ZNF233A6NK53 670 aa26.62■■□□□ 1.85
HOXC9-201ENST00000303450 TULP1O00294 542 aaPredicted RBP26.62■■□□□ 1.85
HOXC9-201ENST00000303450 DNAJB2P25686 324 aa26.62■■□□□ 1.85
HOXC9-201ENST00000303450 PMS1P54277 932 aaKnown RBP26.62■■□□□ 1.85
HOXC9-201ENST00000303450 POU5F1Q01860 360 aaKnown RBP26.62■■□□□ 1.85
HOXC9-201ENST00000303450 SPOUT1Q5T280 376 aaKnown RBP26.62■■□□□ 1.85
HOXC9-201ENST00000303450 FBXL18Q96ME1 805 aa26.62■■□□□ 1.85
HOXC9-201ENST00000303450 CXCL16Q9H2A7 254 aa26.62■■□□□ 1.85
HOXC9-201ENST00000303450 NKX2-4Q9H2Z4 354 aa26.62■■□□□ 1.85
HOXC9-201ENST00000303450 RBAKQ9NYW8 714 aaPredicted RBP26.62■■□□□ 1.85
HOXC9-201ENST00000303450 TTC26A0AVF1 554 aa26.61■■□□□ 1.85
HOXC9-201ENST00000303450 THP07101 528 aa26.61■■□□□ 1.85
HOXC9-201ENST00000303450 ADAM9Q13443 819 aa26.61■■□□□ 1.85
HOXC9-201ENST00000303450 SNRNP35Q16560 246 aaKnown RBP26.61■■□□□ 1.85
HOXC9-201ENST00000303450 XKR4Q5GH76 650 aa26.61■■□□□ 1.85
HOXC9-201ENST00000303450 GLRA4Q5JXX5 417 aa26.61■■□□□ 1.85
HOXC9-201ENST00000303450 LRRC55Q6ZSA7 311 aa26.61■■□□□ 1.85
HOXC9-201ENST00000303450 CBWD2Q8IUF1 395 aa26.61■■□□□ 1.85
HOXC9-201ENST00000303450 CD302Q8IX05 232 aa26.61■■□□□ 1.85
HOXC9-201ENST00000303450 FAM193BQ96PV7 902 aaPredicted RBP26.61■■□□□ 1.85
HOXC9-201ENST00000303450 CNTN3Q9P232 1028 aa26.61■■□□□ 1.85
HOXC9-201ENST00000303450 FRMD4BQ9Y2L6 1034 aa26.61■■□□□ 1.85
HOXC9-201ENST00000303450 MRPL42Q9Y6G3 142 aaKnown RBP26.61■■□□□ 1.85
HOXC9-201ENST00000303450 TDRD15B5MCY1 1934 aaKnown RBP26.61■■□□□ 1.85
HOXC9-201ENST00000303450 LINC01553A4QN01 128 aa26.6■■□□□ 1.85
HOXC9-201ENST00000303450 LACTBL1A8MY62 500 aa26.6■■□□□ 1.85
HOXC9-201ENST00000303450 PTGESO14684 152 aa26.6■■□□□ 1.85
HOXC9-201ENST00000303450 MEFVO15553 781 aaPredicted RBP26.6■■□□□ 1.85
HOXC9-201ENST00000303450 STX17P56962 302 aa26.6■■□□□ 1.85
HOXC9-201ENST00000303450 GRIK3Q13003 919 aa26.6■■□□□ 1.85
HOXC9-201ENST00000303450 CEP135Q66GS9 1140 aa26.6■■□□□ 1.85
HOXC9-201ENST00000303450 BRSK2Q8IWQ3 736 aa26.6■■□□□ 1.85
HOXC9-201ENST00000303450 TIFAQ96CG3 184 aa26.6■■□□□ 1.85
HOXC9-201ENST00000303450 SLC28A3Q9HAS3 691 aa26.6■■□□□ 1.85
HOXC9-201ENST00000303450 ANO10Q9NW15 660 aa26.6■■□□□ 1.85
HOXC9-201ENST00000303450 SMIM28A0A1B0GU29 152 aa26.6■■□□□ 1.85
HOXC9-201ENST00000303450 KCNE1P15382 129 aa26.6■■□□□ 1.85
HOXC9-201ENST00000303450 FKBP3Q00688 224 aaKnown RBP26.6■■□□□ 1.85
HOXC9-201ENST00000303450 STX1AQ16623 288 aa26.6■■□□□ 1.85
HOXC9-201ENST00000303450 HCSTQ9UBK5 93 aa26.6■■□□□ 1.85
HOXC9-201ENST00000303450 RWDD2AQ9UIY3 292 aa26.6■■□□□ 1.85
HOXC9-201ENST00000303450 PLAGL2Q9UPG8 496 aa26.6■■□□□ 1.85
HOXC9-201ENST00000303450 CETN3O15182 167 aa26.59■■□□□ 1.85
HOXC9-201ENST00000303450 IL18RAPO95256 599 aa26.59■■□□□ 1.85
HOXC9-201ENST00000303450 ADRB2P07550 413 aa26.59■■□□□ 1.85
HOXC9-201ENST00000303450 PPP2R2DQ66LE6 453 aa26.59■■□□□ 1.85
HOXC9-201ENST00000303450 ZNF280BQ86YH2 543 aa26.59■■□□□ 1.85
HOXC9-201ENST00000303450 ZMAT2Q96NC0 199 aaKnown RBP26.59■■□□□ 1.85
HOXC9-201ENST00000303450 ASB7Q9H672 318 aa26.59■■□□□ 1.85
HOXC9-201ENST00000303450 CWH43Q9H720 699 aa26.59■■□□□ 1.85
HOXC9-201ENST00000303450 RALGAPA2Q2PPJ7 1873 aa26.58■■□□□ 1.85
HOXC9-201ENST00000303450 SPAG1Q07617 926 aa26.58■■□□□ 1.85
HOXC9-201ENST00000303450 TTI2Q6NXR4 508 aa26.58■■□□□ 1.85
HOXC9-201ENST00000303450 FOXR2Q6PJQ5 311 aa26.58■■□□□ 1.85
HOXC9-201ENST00000303450 KIF12Q96FN5 646 aa26.58■■□□□ 1.85
HOXC9-201ENST00000303450 EEF2KMTQ96G04 330 aa26.58■■□□□ 1.85
HOXC9-201ENST00000303450 PPP1R10Q96QC0 940 aaKnown RBP26.58■■□□□ 1.85
HOXC9-201ENST00000303450 NRDE2Q9H7Z3 1164 aa26.58■■□□□ 1.85
HOXC9-201ENST00000303450 SYCE3A1L190 88 aa26.57■■□□□ 1.84
HOXC9-201ENST00000303450 ZC3H11AO75152 810 aaKnown RBP eCLIP26.57■■□□□ 1.847e-6■■■■■ 33.7
HOXC9-201ENST00000303450 DDHD2O94830 711 aa26.57■■□□□ 1.84
HOXC9-201ENST00000303450 CASP4P49662 377 aa26.57■■□□□ 1.84
HOXC9-201ENST00000303450 TYRO3Q06418 890 aa26.57■■□□□ 1.84
HOXC9-201ENST00000303450 CT47A1Q5JQC4 288 aaPredicted RBP26.57■■□□□ 1.84
HOXC9-201ENST00000303450 CLP1Q92989 425 aaKnown RBP26.57■■□□□ 1.84
HOXC9-201ENST00000303450 TSPAN18Q96SJ8 248 aa26.57■■□□□ 1.84
HOXC9-201ENST00000303450 AAASQ9NRG9 546 aa26.57■■□□□ 1.84
HOXC9-201ENST00000303450 SLC38A7Q9NVC3 462 aa26.57■■□□□ 1.84
HOXC9-201ENST00000303450 ARHGEF15O94989 841 aa26.56■■□□□ 1.84
HOXC9-201ENST00000303450 ERCC5P28715 1186 aaPredicted RBP26.56■■□□□ 1.84
HOXC9-201ENST00000303450 TAP1Q03518 808 aa26.56■■□□□ 1.84
HOXC9-201ENST00000303450 CYP24A1Q07973 514 aa26.56■■□□□ 1.84
HOXC9-201ENST00000303450 SURF1Q15526 300 aa26.56■■□□□ 1.84
HOXC9-201ENST00000303450 HABP4Q5JVS0 413 aaKnown RBP26.56■■□□□ 1.84
HOXC9-201ENST00000303450 JADE1Q6IE81 842 aa26.56■■□□□ 1.84
HOXC9-201ENST00000303450 PDE11AQ9HCR9 933 aa26.56■■□□□ 1.84
HOXC9-201ENST00000303450 RWDD3Q9Y3V2 267 aa26.56■■□□□ 1.84
HOXC9-201ENST00000303450 ANK1P16157 1881 aa26.56■■□□□ 1.84
HOXC9-201ENST00000303450 SOX1O00570 391 aaPredicted RBP26.55■■□□□ 1.84
HOXC9-201ENST00000303450 AKAP3O75969 853 aa26.55■■□□□ 1.84
HOXC9-201ENST00000303450 CCDC192P0DO97 292 aa26.55■■□□□ 1.84
HOXC9-201ENST00000303450 LAG3P18627 525 aa26.55■■□□□ 1.84
HOXC9-201ENST00000303450 PSMC2P35998 433 aaKnown RBP26.55■■□□□ 1.84
HOXC9-201ENST00000303450 TUSC3Q13454 348 aa26.55■■□□□ 1.84
HOXC9-201ENST00000303450 TMEM132DQ14C87 1099 aa26.55■■□□□ 1.84
HOXC9-201ENST00000303450 CSGALNACT2Q8N6G5 542 aa26.55■■□□□ 1.84
HOXC9-201ENST00000303450 MFSD14AQ96MC6 490 aa26.55■■□□□ 1.84
HOXC9-201ENST00000303450 TGS1Q96RS0 853 aaKnown RBP26.55■■□□□ 1.84
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms